Rh6CG315900

Serine-threonine protein kinase 19

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0001830
Physical Location & Seq
Forward (+)
50090971 .. 50094599
3629 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG315900.1

Sequence Viewer

Length: 573 bp
ATGGCCGGAAATATTTCAGAATCTTTGAAAGGTAAAAAGCGCGCGCGAGAATCCCACGCCGAACCCGAAACCGCCGATATCGATCATATTCTATCGTTAGAGGAAAATCTTACGTTTAGTGATACATTGGTGGCTCTTCGCATAATGCGAGAACAGTTTCCGCAAATTGACAAGCCAATTCAGCCTTTCATTTTGCGGTCACAGTTGTATAGCAGTGTAGAGGACAGGACACAAGTGGACCGGGACCTGGAGACTCTAAGAAGGGAGAAAGTGTTGCGCATTTTTAAATTAAATACGGGGCAAGATGATCATGCCATAATGTTTTTGGATGACTACCTATGCCAGGTAGACCGAGTTGTGAAAAGATTGGAAGGAGAAAAGGGAAGAGATGTTCTTGAAGTTTTTAATTGGTTCAGATCACACGTTATTGATTTCAAGCTTGAACCTAGTATTGAACACCAAGAACTTTGTACATTATTATCACTTGGAGGAAAGGTTAAAGATGAACACATCTCACTTTTAATGAATTCTGGCCTTCTTGTAAGTAAACTTGCACATCGATATTTACGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Stk19

Protein Analysis

190

Amino Acids

22.09

Weight (kDa)

5.99

Isoelectric Point (pI)

41.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stk19 PF10494 36 - 183 2.4e-14 Inactive serine-threonine protein kinase 19
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 278
AccI GTMKAC 1 cut(s) 348
AccII CGCG 3 cut(s) 42, 44, 46
AciI CCGC 3 cut(s) 72, 161, 196
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 526
AfaI GTAC 1 cut(s) 472
AfiI CCNNNNNNNGG 2 cut(s) 247, 343
AflIII ACRYGT 1 cut(s) 421
AgsI TTSAA 5 cut(s) 28, 398, 436, 443, 455
AjnI CCWGG 2 cut(s) 246, 342
AloI GAACNNNNNNTCC 2 cut(s) 375, 407
AluBI AGCT 1 cut(s) 439
AluI AGCT 1 cut(s) 439
Alw26I GTCTC 1 cut(s) 245
AoxI GGCC 2 cut(s) 3, 532
ApoI RAATTY 1 cut(s) 526
Asp700I GAANNNNTTC 2 cut(s) 13, 156
AspLEI GCGC 4 cut(s) 42, 44, 46, 279
AspS9I GGNCC 2 cut(s) 238, 244
AsuC2I CCSGG 1 cut(s) 242
AvaII GGWCC 2 cut(s) 238, 244
BaeI ACNNNNGTAYC 2 cut(s) 114, 147
BciT130I CCWGG 2 cut(s) 248, 344
BclI TGATCA 1 cut(s) 307
BcnI CCSGG 1 cut(s) 242
BcoDI GTCTC 1 cut(s) 245
BfaI CTAG 1 cut(s) 447
Bme1390I CCNGG 3 cut(s) 242, 248, 344
Bme18I GGWCC 2 cut(s) 238, 244
BmgT120I GGNCC 2 cut(s) 238, 244
BmiI GGNNCC 1 cut(s) 245
BmrFI CCNGG 3 cut(s) 242, 248, 344
BpmI CTGGAG 1 cut(s) 269
BpuMI CCSGG 1 cut(s) 242
Bsa29I ATCGAT 2 cut(s) 81, 559
BsaBI GATNNNNATC 1 cut(s) 81
BsaXI ACNNNNNCTCC 4 cut(s) 257, 287, 480, 510
Bsc4I CCNNNNNNNGG 2 cut(s) 247, 343
Bse8I GATNNNNATC 1 cut(s) 81
BseBI CCWGG 2 cut(s) 248, 344
BseCI ATCGAT 2 cut(s) 81, 559
BseGI GGATG 1 cut(s) 334
BseJI GATNNNNATC 1 cut(s) 81
BseLI CCNNNNNNNGG 2 cut(s) 247, 343
BsePI GCGCGC 2 cut(s) 40, 42
Bsh1236I CGCG 3 cut(s) 42, 44, 46
BshFI GGCC 2 cut(s) 5, 534
BshVI ATCGAT 2 cut(s) 81, 559
BsiSI CCGG 2 cut(s) 6, 241
BslFI GGGAC 1 cut(s) 257
BslI CCNNNNNNNGG 2 cut(s) 247, 343
BsmAI GTCTC 1 cut(s) 245
BsmFI GGGAC 1 cut(s) 257
BsnI GGCC 2 cut(s) 5, 534
Bsp1407I TGTACA 1 cut(s) 470
Bsp143I GATC 3 cut(s) 82, 307, 416
BspACI CCGC 3 cut(s) 72, 161, 196
BspANI GGCC 2 cut(s) 5, 534
BspDI ATCGAT 2 cut(s) 81, 559
BspFNI CGCG 3 cut(s) 42, 44, 46
BspLI GGNNCC 1 cut(s) 245
BspQI GCTCTTC 1 cut(s) 141
BsrGI TGTACA 1 cut(s) 470
BssHII GCGCGC 2 cut(s) 40, 42
BssMI GATC 3 cut(s) 82, 307, 416
Bst2UI CCWGG 2 cut(s) 248, 344
Bst4CI ACNGT 2 cut(s) 156, 204
Bst6I CTCTTC 2 cut(s) 141, 379
BstAUI TGTACA 1 cut(s) 470
BstC8I GCNNGC 2 cut(s) 42, 44
BstDEI CTNAG 1 cut(s) 257
BstENI CCTNNNNNAGG 1 cut(s) 341
BstF5I GGATG 1 cut(s) 334
BstFNI CGCG 3 cut(s) 42, 44, 46
BstHHI GCGC 4 cut(s) 42, 44, 46, 279
BstKTI GATC 3 cut(s) 85, 310, 419
BstMAI GTCTC 1 cut(s) 245
BstMBI GATC 3 cut(s) 82, 307, 416
BstMWI GCNNNNNNNGC 1 cut(s) 181
BstNI CCWGG 2 cut(s) 248, 344
BstSCI CCNGG 3 cut(s) 240, 246, 342
BstUI CGCG 3 cut(s) 42, 44, 46
Bsu15I ATCGAT 2 cut(s) 81, 559
BsuRI GGCC 2 cut(s) 5, 534
BsuTUI ATCGAT 2 cut(s) 81, 559
BtsCI GGATG 1 cut(s) 334
BtsI GCAGTG 1 cut(s) 220
BtsIMutI CAGTG 1 cut(s) 220
Cac8I GCNNGC 2 cut(s) 42, 44
CfoI GCGC 4 cut(s) 42, 44, 46, 279
Cfr13I GGNCC 2 cut(s) 238, 244
ClaI ATCGAT 2 cut(s) 81, 559
Csp6I GTAC 1 cut(s) 471
CviAII CATG 1 cut(s) 311
CviJI RGCY 6 cut(s) 5, 134, 175, 184, 439, 534
CviKI_1 RGCY 6 cut(s) 5, 134, 175, 184, 439, 534
CviQI GTAC 1 cut(s) 471
DdeI CTNAG 1 cut(s) 257
DpnI GATC 3 cut(s) 84, 309, 418
DpnII GATC 3 cut(s) 82, 307, 416
DraI TTTAAA 1 cut(s) 286
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 141, 379
EarI CTCTTC 2 cut(s) 141, 379
Eco32I GATATC 1 cut(s) 79
Eco47I GGWCC 2 cut(s) 238, 244
EcoNI CCTNNNNNAGG 1 cut(s) 341
EcoO109I RGGNCCY 1 cut(s) 244
EcoRI GAATTC 1 cut(s) 526
EcoRII CCWGG 2 cut(s) 246, 342
EcoRV GATATC 1 cut(s) 79
FaeI CATG 1 cut(s) 314
FaiI YATR 6 cut(s) 87, 143, 210, 312, 317, 340
FaqI GGGAC 1 cut(s) 257
FatI CATG 1 cut(s) 310
FbaI TGATCA 1 cut(s) 307
FblI GTMKAC 1 cut(s) 348
FokI GGATG 1 cut(s) 341
FspBI CTAG 1 cut(s) 447
FspI TGCGCA 1 cut(s) 278
GlaI GCGC 4 cut(s) 41, 43, 45, 278
GsuI CTGGAG 1 cut(s) 269
HaeIII GGCC 2 cut(s) 5, 534
HapII CCGG 2 cut(s) 6, 241
HhaI GCGC 4 cut(s) 42, 44, 46, 279
Hin1II CATG 1 cut(s) 314
Hin6I GCGC 4 cut(s) 40, 42, 44, 277
HinP1I GCGC 4 cut(s) 40, 42, 44, 277
HindIII AAGCTT 1 cut(s) 437
HinfI GANTC 3 cut(s) 20, 50, 253
HpaII CCGG 2 cut(s) 6, 241
Hpy166II GTNNAC 3 cut(s) 238, 349, 548
Hpy188I TCNGA 2 cut(s) 19, 416
Hpy188III TCNNGA 1 cut(s) 395
Hpy8I GTNNAC 3 cut(s) 238, 349, 548
HpyAV CCTTC 3 cut(s) 255, 365, 545
HpyCH4III ACNGT 2 cut(s) 156, 204
HpyCH4IV ACGT 3 cut(s) 113, 423, 568
HpyCH4V TGCA 1 cut(s) 554
HpyF10VI GCNNNNNNNGC 1 cut(s) 181
HpyF3I CTNAG 1 cut(s) 257
HpySE526I ACGT 3 cut(s) 113, 423, 568
Hsp92II CATG 1 cut(s) 314
HspAI GCGC 4 cut(s) 40, 42, 44, 277
Ksp22I TGATCA 1 cut(s) 307
Kzo9I GATC 3 cut(s) 82, 307, 416
LguI GCTCTTC 1 cut(s) 141
LpnPI CCDG 8 cut(s) 19, 211, 233, 254, 260, 329, 356, 516
MaeI CTAG 1 cut(s) 447
MaeII ACGT 3 cut(s) 113, 423, 568
MaeIII GTNAC 1 cut(s) 198
MalI GATC 3 cut(s) 84, 309, 418
MauBI CGCGCGCG 1 cut(s) 42
MboI GATC 3 cut(s) 82, 307, 416
MboII GAAGA 2 cut(s) 128, 396
MluCI AATT 5 cut(s) 165, 177, 287, 406, 526
MlyI GAGTC 1 cut(s) 247
MnlI CCTC 3 cut(s) 94, 214, 482
MroXI GAANNNNTTC 2 cut(s) 13, 156
MseI TTAA 6 cut(s) 285, 290, 405, 498, 521, 571
MspI CCGG 2 cut(s) 6, 241
MspR9I CCNGG 3 cut(s) 242, 248, 344
MvaI CCWGG 2 cut(s) 248, 344
MvnI CGCG 3 cut(s) 42, 44, 46
MwoI GCNNNNNNNGC 1 cut(s) 181
NciI CCSGG 1 cut(s) 242
NdeII GATC 3 cut(s) 82, 307, 416
NlaIII CATG 1 cut(s) 314
NlaIV GGNNCC 1 cut(s) 245
NmuCI GTSAC 1 cut(s) 198
NsbI TGCGCA 1 cut(s) 278
PauI GCGCGC 2 cut(s) 40, 42
PciSI GCTCTTC 1 cut(s) 141
PcsI WCGNNNNNNNCGW 3 cut(s) 63, 145, 565
PdmI GAANNNNTTC 2 cut(s) 13, 156
PfeI GAWTC 2 cut(s) 20, 50
PleI GAGTC 1 cut(s) 247
PpsI GAGTC 1 cut(s) 247
PpuMI RGGWCCY 1 cut(s) 244
Psp5II RGGWCCY 1 cut(s) 244
Psp6I CCWGG 2 cut(s) 246, 342
PspGI CCWGG 2 cut(s) 246, 342
PspN4I GGNNCC 1 cut(s) 245
PspPI GGNCC 2 cut(s) 238, 244
PspPPI RGGWCCY 1 cut(s) 244
PteI GCGCGC 2 cut(s) 40, 42
RsaI GTAC 1 cut(s) 472
RsaNI GTAC 1 cut(s) 471
SapI GCTCTTC 1 cut(s) 141
SaqAI TTAA 6 cut(s) 285, 290, 405, 498, 521, 571
Sau3AI GATC 3 cut(s) 82, 307, 416
Sau96I GGNCC 2 cut(s) 238, 244
SchI GAGTC 1 cut(s) 247
ScrFI CCNGG 3 cut(s) 242, 248, 344
SinI GGWCC 2 cut(s) 238, 244
Sse9I AATT 5 cut(s) 165, 177, 287, 406, 526
SsiI CCGC 3 cut(s) 72, 161, 196
SspI AATATT 1 cut(s) 13
SspMI CTAG 1 cut(s) 447
StyD4I CCNGG 3 cut(s) 240, 246, 342
TaaI ACNGT 2 cut(s) 156, 204
TaiI ACGT 3 cut(s) 116, 426, 571
TaqI TCGA 2 cut(s) 81, 559
TaqII GACCGA 1 cut(s) 366
TasI AATT 5 cut(s) 165, 177, 287, 406, 526
TatI WGTACW 1 cut(s) 470
TfiI GAWTC 2 cut(s) 20, 50
Tru1I TTAA 6 cut(s) 285, 290, 405, 498, 521, 571
Tru9I TTAA 6 cut(s) 285, 290, 405, 498, 521, 571
TscAI CASTG 1 cut(s) 220
TseFI GTSAC 1 cut(s) 198
Tsp45I GTSAC 1 cut(s) 198
TspDTI ATGAA 3 cut(s) 178, 519, 539
TspRI CASTG 1 cut(s) 220
VpaK11BI GGWCC 2 cut(s) 238, 244
XagI CCTNNNNNAGG 1 cut(s) 341
XapI RAATTY 1 cut(s) 526
XcmI CCANNNNNNNNNTGG 1 cut(s) 322
XmiI GTMKAC 1 cut(s) 348
XmnI GAANNNNTTC 2 cut(s) 13, 156
XspI CTAG 1 cut(s) 447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.