Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0010707

Physical Location & Seq

Genomic Coordinates Forward (+)

33747483 .. 33794229

Gene Structure 46747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0212200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2703 bp

ATGGCTTGCAATATGAACAGAGGGGTTTCTTCTTCTTCCTTTACTTCAATTAGGTGGAGTTACGATGTGTTCTTGAGTTTTAGAGGTGAAGATACACGTAATAATTTTACTAGCCATTTGTATGCTGCTTTGTGCCAGAGGGGTTTTCACACCTTCATAGATGACCGTGATCTTAGAAAAGGAGAAGAGATTGGACCAACACTTGTCAAAGCAATTCAGGAGTCAAGGGTTTCTGTCATTATATTCTCCGAAAACTATGCATCCTCCAAATGGTGCTTGAATGAACTACTCATCATCCTTGATTGTAAGGAATCAAAGGGACAACTTGTTTGGCCCATTTTTTACAAGGTGAATCCTTCAGATGTAAGAAATCAGAGAGGCAGCTTTGCTGAGGCAATGCATCAACATGAAGTGCAGTTCAACTTCAACATGGACCGGGTACAGAGGTGGAGGACAGCTCTTACTCATGCAGCTAGTCTGTCTGGATGGCATTTTCCGGAGGGGCATGAATCCAAGTTCATCCAAAATATTGTGGAAGAGATCTCAATTCAAGTATCAAATTGGACATACATGAAACTTGCTAAGTATCCTGTAGGACTGGAATCTCGAGTCCGGGATATGCATGAGCTTCTATGTGTTGAGGAAAATGATGTTCGCATGGTGGGAATATGGGGAATTGGAGGAATTGGTAAGACAACTGTTGCCAAAGCGGTATATGGGTCAATTGCTCATCGATTTGAAGGTAGCTGTTTTTTGGAAAATGTGAGAGAAAGGTCATTAGTGCCACATGAAGGCTTGGTTCAACTGCAAGAAACTCTTCTTTCCAAGATTTTAAGGGGTGTAGGAGTGAAGCTGAGCAATGTTGATGATCCTGCTTATGAAATAGAGAAAAGGCTTTGGAATAAGAGGGTTCTTATAGTTTTAGATGATGTGGATCATCTCAAGCAATTAGAAAACTTAGCAGGAGGATATAATTGGTTTGGTCCGGGTAGTAGAGTTATGATAATAACTAGAGATAAACATCTGTTAATTGCTCATGGAGTTAGTTTAACATACAAGGTCAAGGAATTAGAATTCTGTGAAGCTTTTGAGCTTTTCAGTTGGAATTCCTTCAAAAAAGACCGACCTAAGGATGATTATGTGAAACTTGTTGAGCGTGCTGTCTATTATACCAAAGGCCTTCCATTAGCTCTGACGGTTTTAGGTTCTCATCTTTTTGGTAGAAGCATAGAAGAGTGGCAAGATGCATTGGATAGTTATGAAAGAATTCCTAATAAAGAAGTCCAAGAAATACTTAAAATAAGTTTCAATGGATTAGAAGATCATCAGAAGGAAGTTTTCCTTGACATTGCATGTTTTTTCAAAGGAGAAGATAAAGAGTTTATAATGGATGTCCTAAGAAGTTGTGACTTGTACCCAGTAATAAGTATTGCAGTGCTCATAGATAAGTCCCTCTTAGCGATTAGTGAAAGTAATGCGCTATGTATGCATGACTTAATCGAAGACATGGGCAAGGAAATAGTGCGTCAAGAATCACCCACAGAACCGGGTGAACGCAGTAGATTGTGGTTTCATAAGGATGTTTTACATGTTCTAACAGAAGAAACAGGAACAAGTAAAGTTCGAGGCCTAAAGATAGAAATGCCCAAAAAAGAAGAGATCCATGTGGGTGCTGAAGCCTTGTTAAGAATGAGGAATCTCAGATACTTGATAAATCGAAATTCAAGCCTTGTTGGAAACATTGGTTATCTGCCCAACTCGTTAAGGTTCCTTGATTGGTACAAATATCCTCTTGAATCCCTACCATCCAATTTTAATCCAAAGAAACTTGTTGCACTCAATATGCCTTCCAGCAACATATCACGTTTCGGACAGTCGATCACGAAACTTGATAGATTGAAATCTATGGACTTCACTGGATGTGAAATGCTAAAAGAAATCCCGGACTTCTCAGGATTTCCGAATTTACAGAAATTGATTCTTAGAGAATGTAGGAGTTTAGTCGGGATTCATGATTCTGTTGGAACCCTTGATAAGCTTGTGAGTTTGTCTGTGCAAGATTGCTCTAACCTTACAAGGTTTCCCACAAGACTTGGCATGAAATCACTGAAAGTTCTTAATATGAAAGGTTGCAAACTGCTGGAGAGCTTCCCTGAAATTGAGGCTGGAACCATGGAACATTTGCAGAACATATATCTACAGTGTTGCGAAAACCTTAAAACTCTTCCAAGCAGCATCTATCAGTTGAAACATCTGCTGCATCTTGAGGTCAGAGGCTGTCCAAAACTTCTTACATTTCCAATGTCAGCGACAACATCCACCATCAAGCAGTATTTATCTGATGACAATAATAATGAAGACTACTCAGTACCGGTGTTTCCTGAGCTGACGTTTTTGCGAGTCGGAGACTGCAACATTTCAGAATGTGATTTCTTGATTCCATTTAGTTGTTTGTCCACCCTGACCTTTCTTGATCTATCAGGAAGCAGTTTTGGTAGCCTTGCAACATGGATTATCAAGTTTGGTAACTTGCAGTGGCTCATATTACGCGATTGCAAGAGGCTTCAAGAAATTCCACAGCTTTCTCCAAGCATAAAAGGAATAAATGCAAGTGGCTGCAAATCTTTGGAAAGATTTTCAAAATTTTCCAATATTTTTGTCACGCCCCGAATTTTGAATAATAAATTCAAATCCGAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0003674 GO:0003824 GO:0006082 GO:0006520 GO:0006555 GO:0006575 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008172 GO:0008652 GO:0008757 GO:0008898 GO:0009058 GO:0009066 GO:0009067 GO:0009086 GO:0009987 GO:0016053 GO:0016740 GO:0016741 GO:0019752 GO:0032259 GO:0033477 GO:0033528 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 ko01110 map00270 map01100 map01110

Pfam Domains

Protein Families

S-methyl_trans

Protein Analysis

900

Amino Acids

102.88

Weight (kDa)

6.91

Isoelectric Point (pI)

48.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIR	PF01582	21 - 186	3.6e-56	TIR domain
TIR_2	PF13676	23 - 119	1.8e-15	TIR domain
NB-ARC	PF00931	204 - 373	1.9e-17	NB-ARC domain
WHD_ROQ1	PF23282	441 - 512	9.3e-22	Disease resistance protein Roq1-like, winged-helix domain
LRR_13	PF23286	701 - 882	1.1e-06	Disease resistance protein RPS4B-like, leucine-rich repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010707)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63250 AT3G63250 AT3G63250
fragaria_vesca	FvH4_2g23130 FvH4_2g23130
malus_domestica	MD03G1260400.v1.1 MD11G1280700.v1.1
prunus_persica	Prupe.8G236600_v2.0.a1
pyrus_communis	pycom03g20810 pycom11g24850
rosa_chinensis	RchiOBHm_Chr6g0290381
rosa_laevigata	RLG00000012224
rosa_multiflora	Rmu_sc0025482.1_g000001
rosa_roxburghii	Rroxscaffold_7G00177120
rosa_rugosa	Rorug06G0212100 Rorug06G0212100 Rorug06G0212200
rosa_samantha	Rh6DG322700
rosa_wichuraiana	Rw6G027840 Rw6G027940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1385
AccII	CGCG	1 cut(s)	2550
AccIII	TCCGGA	1 cut(s)	496
AciI	CCGC	1 cut(s)	710
AclWI	GGATC	3 cut(s)	863, 942, 1654
AcsI	RAATTY	9 cut(s)	1073, 1105, 1266, 1720, 1963, 2571, 2642, 2670, 2684
AcuI	CTGAAG	2 cut(s)	342, 1695
AfaI	GTAC	4 cut(s)	441, 1415, 1781, 2370
AfiI	CCNNNNNNNGG	3 cut(s)	270, 791, 1129
AflIII	ACRYGT	2 cut(s)	95, 1588
AgeI	ACCGGT	1 cut(s)	2371
Alw21I	GWGCWC	1 cut(s)	1440
Alw26I	GTCTC	1 cut(s)	2400
AlwI	GGATC	3 cut(s)	863, 942, 1654
AlwNI	CAGNNNCTG	1 cut(s)	2277
Ama87I	CYCGRG	1 cut(s)	606
Aor13HI	TCCGGA	1 cut(s)	496
AoxI	GGCC	3 cut(s)	332, 1177, 1627
ApeKI	GCWGC	6 cut(s)	125, 381, 470, 2232, 2257, 2616
ApoI	RAATTY	9 cut(s)	1073, 1105, 1266, 1720, 1963, 2571, 2642, 2670, 2684
ArsI	GACNNNNNNTTYG	2 cut(s)	312, 344
AsiGI	ACCGGT	1 cut(s)	2371
Asp700I	GAANNNNTTC	3 cut(s)	816, 1109, 1266
AspLEI	GCGC	1 cut(s)	1480
AspS9I	GGNCC	4 cut(s)	194, 333, 433, 983
AsuC2I	CCSGG	5 cut(s)	437, 614, 987, 1548, 1943
AsuHPI	GGTGA	4 cut(s)	98, 361, 1527, 1562
AvaI	CYCGRG	1 cut(s)	606
AvaII	GGWCC	3 cut(s)	194, 433, 983
AxyI	CCTNAGG	1 cut(s)	1128
BaeI	ACNNNNGTAYC	2 cut(s)	431, 464
BbsI	GAAGAC	2 cut(s)	1509, 2364
Bbv12I	GWGCWC	1 cut(s)	1440
BbvCI	CCTCAGC	1 cut(s)	390
BbvI	GCAGC	6 cut(s)	112, 393, 482, 2244, 2244, 2603
BccI	CCATC	3 cut(s)	480, 1813, 2330
BcgI	CGANNNNNNTGC	2 cut(s)	239, 273
BciVI	GTATCC	1 cut(s)	597
BcnI	CCSGG	5 cut(s)	437, 614, 987, 1548, 1943
BcoDI	GTCTC	1 cut(s)	2400
BfaI	CTAG	3 cut(s)	111, 474, 1011
BfmI	CTRYAG	2 cut(s)	591, 2198
BfuI	GTATCC	1 cut(s)	597
BglII	AGATCT	1 cut(s)	540
BisI	GCNGC	6 cut(s)	126, 382, 471, 2233, 2258, 2617
BlpI	GCTNAGC	1 cut(s)	854
BlsI	GCNGC	6 cut(s)	127, 383, 472, 2234, 2259, 2618
Bme1390I	CCNGG	5 cut(s)	437, 614, 987, 1548, 1943
Bme18I	GGWCC	3 cut(s)	194, 433, 983
BmeT110I	CYCGRG	1 cut(s)	606
BmgT120I	GGNCC	4 cut(s)	194, 333, 433, 983
BmiI	GGNNCC	3 cut(s)	1769, 2026, 2170
BmrFI	CCNGG	5 cut(s)	437, 614, 987, 1548, 1943
BmrI	ACTGGG	1 cut(s)	1412
BmsI	GCATC	5 cut(s)	269, 409, 1234, 2244, 2269
BmuI	ACTGGG	1 cut(s)	1412
BpiI	GAAGAC	2 cut(s)	1509, 2364
BplI	GAGNNNNNCTC	2 cut(s)	442, 474
BpmI	CTGGAG	1 cut(s)	2162
Bpu10I	CCTNAGC	2 cut(s)	390, 2382
Bpu1102I	GCTNAGC	1 cut(s)	854
BpuEI	CTTGAG	3 cut(s)	94, 926, 2285
BpuMI	CCSGG	5 cut(s)	437, 614, 987, 1548, 1943
Bsa29I	ATCGAT	1 cut(s)	733
BsaAI	YACGTR	1 cut(s)	98
BsaBI	GATNNNNATC	3 cut(s)	933, 1020, 1900
BsaJI	CCNNGG	1 cut(s)	2172
BsaWI	WCCGGW	2 cut(s)	496, 2371
Bsc4I	CCNNNNNNNGG	3 cut(s)	270, 791, 1129
Bse118I	RCCGGY	1 cut(s)	2371
Bse1I	ACTGG	3 cut(s)	603, 1418, 1921
Bse21I	CCTNAGG	1 cut(s)	1128
Bse3DI	GCAATG	3 cut(s)	402, 865, 1347
Bse8I	GATNNNNATC	3 cut(s)	933, 1020, 1900
BseAI	TCCGGA	1 cut(s)	496
BseCI	ATCGAT	1 cut(s)	733
BseDI	CCNNGG	1 cut(s)	2172
BseJI	GATNNNNATC	3 cut(s)	933, 1020, 1900
BseLI	CCNNNNNNNGG	3 cut(s)	270, 791, 1129
BseMI	GCAATG	3 cut(s)	402, 865, 1347
BseMII	CTCAG	6 cut(s)	381, 845, 1714, 1965, 2373, 2379
BseNI	ACTGG	3 cut(s)	603, 1418, 1921
BseXI	GCAGC	6 cut(s)	112, 393, 482, 2244, 2244, 2603
BsgI	GTGCAG	1 cut(s)	434
Bsh1236I	CGCG	1 cut(s)	2550
BshFI	GGCC	3 cut(s)	334, 1179, 1629
BshTI	ACCGGT	1 cut(s)	2371
BshVI	ATCGAT	1 cut(s)	733
BsiHKAI	GWGCWC	1 cut(s)	1440
BsiHKCI	CYCGRG	1 cut(s)	606
BsiSI	CCGG	7 cut(s)	436, 497, 613, 986, 1547, 1943, 2372
BslFI	GGGAC	2 cut(s)	333, 1435
BslI	CCNNNNNNNGG	3 cut(s)	270, 791, 1129
BsmAI	GTCTC	1 cut(s)	2400
BsmFI	GGGAC	2 cut(s)	333, 1435
BsnI	GGCC	3 cut(s)	334, 1179, 1629
BsoBI	CYCGRG	1 cut(s)	606
Bsp1286I	GDGCHC	1 cut(s)	1440
Bsp13I	TCCGGA	1 cut(s)	496
Bsp143I	GATC	8 cut(s)	169, 540, 868, 934, 1321, 1659, 1878, 2473
Bsp1720I	GCTNAGC	1 cut(s)	854
Bsp19I	CCATGG	1 cut(s)	2172
BspACI	CCGC	1 cut(s)	710
BspANI	GGCC	3 cut(s)	334, 1179, 1629
BspCNI	CTCAG	6 cut(s)	382, 846, 1713, 1964, 2374, 2378
BspDI	ATCGAT	1 cut(s)	733
BspEI	TCCGGA	1 cut(s)	496
BspFNI	CGCG	1 cut(s)	2550
BspHI	TCATGA	1 cut(s)	2011
BspLI	GGNNCC	3 cut(s)	1769, 2026, 2170
BspPI	GGATC	3 cut(s)	863, 942, 1654
BsrDI	GCAATG	3 cut(s)	402, 865, 1347
BsrFI	RCCGGY	1 cut(s)	2371
BsrI	ACTGG	3 cut(s)	603, 1418, 1921
BssAI	RCCGGY	1 cut(s)	2371
BssECI	CCNNGG	1 cut(s)	2172
BssMI	GATC	8 cut(s)	169, 540, 868, 934, 1321, 1659, 1878, 2473
BssT1I	CCWWGG	1 cut(s)	2172
Bst4CI	ACNGT	5 cut(s)	167, 700, 1198, 1875, 2202
Bst6I	CTCTTC	6 cut(s)	180, 531, 822, 1227, 1650, 2229
BstBAI	YACGTR	1 cut(s)	98
BstC8I	GCNNGC	2 cut(s)	7, 1158
BstDSI	CCRYGG	1 cut(s)	2172
BstFNI	CGCG	1 cut(s)	2550
BstHHI	GCGC	1 cut(s)	1480
BstKTI	GATC	8 cut(s)	172, 543, 871, 937, 1324, 1662, 1881, 2476
BstMAI	GTCTC	1 cut(s)	2400
BstMBI	GATC	8 cut(s)	169, 540, 868, 934, 1321, 1659, 1878, 2473
BstMWI	GCNNNNNNNGC	1 cut(s)	1486
BstNSI	RCATGY	2 cut(s)	1356, 1592
BstSCI	CCNGG	5 cut(s)	435, 612, 985, 1546, 1941
BstSFI	CTRYAG	2 cut(s)	591, 2198
BstUI	CGCG	1 cut(s)	2550
BstV1I	GCAGC	6 cut(s)	112, 393, 482, 2244, 2244, 2603
BstV2I	GAAGAC	2 cut(s)	1509, 2364
BstX2I	RGATCY	2 cut(s)	540, 1659
BstYI	RGATCY	2 cut(s)	540, 1659
Bsu15I	ATCGAT	1 cut(s)	733
Bsu36I	CCTNAGG	1 cut(s)	1128
BsuI	GTATCC	1 cut(s)	597
BsuRI	GGCC	3 cut(s)	334, 1179, 1629
BsuTUI	ATCGAT	1 cut(s)	733
BtgI	CCRYGG	1 cut(s)	2172
BtsI	GCAGTG	2 cut(s)	1440, 2540
BtsIMutI	CAGTG	5 cut(s)	1440, 1914, 2105, 2207, 2540
Cac8I	GCNNGC	2 cut(s)	7, 1158
CaiI	CAGNNNCTG	1 cut(s)	2277
CciI	TCATGA	1 cut(s)	2011
CfoI	GCGC	1 cut(s)	1480
Cfr10I	RCCGGY	1 cut(s)	2371
Cfr13I	GGNCC	4 cut(s)	194, 333, 433, 983
ClaI	ATCGAT	1 cut(s)	733
CseI	GACGC	1 cut(s)	1514
Csp6I	GTAC	4 cut(s)	440, 1414, 1780, 2369
CspAI	ACCGGT	1 cut(s)	2371
CspCI	CAANNNNNGTGG	2 cut(s)	2074, 2109
CviQI	GTAC	4 cut(s)	440, 1414, 1780, 2369
DpnI	GATC	8 cut(s)	171, 542, 870, 936, 1323, 1661, 1880, 2475
DpnII	GATC	8 cut(s)	169, 540, 868, 934, 1321, 1659, 1878, 2473
Eam1104I	CTCTTC	6 cut(s)	180, 531, 822, 1227, 1650, 2229
EarI	CTCTTC	6 cut(s)	180, 531, 822, 1227, 1650, 2229
Eco130I	CCWWGG	1 cut(s)	2172
Eco147I	AGGCCT	2 cut(s)	1179, 1629
Eco47I	GGWCC	3 cut(s)	194, 433, 983
Eco57I	CTGAAG	2 cut(s)	342, 1695
Eco81I	CCTNAGG	1 cut(s)	1128
Eco88I	CYCGRG	1 cut(s)	606
EcoRI	GAATTC	3 cut(s)	1073, 1105, 1266
EcoT14I	CCWWGG	1 cut(s)	2172
EcoT22I	ATGCAT	5 cut(s)	262, 402, 624, 1249, 1491
ErhI	CCWWGG	1 cut(s)	2172
FalI	AAGNNNNNCTT	8 cut(s)	801, 833, 1278, 1310, 1326, 1358, 1439, 1471
FaqI	GGGAC	2 cut(s)	333, 1435
Fnu4HI	GCNGC	6 cut(s)	126, 382, 471, 2233, 2258, 2617
Fsp4HI	GCNGC	6 cut(s)	126, 382, 471, 2233, 2258, 2617
FspBI	CTAG	3 cut(s)	111, 474, 1011
GlaI	GCGC	1 cut(s)	1479
GluI	GCNGC	6 cut(s)	126, 382, 471, 2233, 2258, 2617
GsuI	CTGGAG	1 cut(s)	2162
HaeIII	GGCC	3 cut(s)	334, 1179, 1629
HapII	CCGG	7 cut(s)	436, 497, 613, 986, 1547, 1943, 2372
HgaI	GACGC	1 cut(s)	1514
HhaI	GCGC	1 cut(s)	1480
Hin6I	GCGC	1 cut(s)	1478
HinP1I	GCGC	1 cut(s)	1478
HindIII	AAGCTT	2 cut(s)	1083, 2036
HpaII	CCGG	7 cut(s)	436, 497, 613, 986, 1547, 1943, 2372
HphI	GGTGA	4 cut(s)	98, 361, 1527, 1562
Hpy166II	GTNNAC	2 cut(s)	1553, 2457
Hpy8I	GTNNAC	2 cut(s)	1553, 2457
HpyAV	CCTTC	8 cut(s)	163, 366, 734, 785, 1120, 1190, 1324, 1857
HpyCH4III	ACNGT	5 cut(s)	167, 700, 1198, 1875, 2202
HpyCH4IV	ACGT	3 cut(s)	97, 1864, 2390
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1486
HpySE526I	ACGT	3 cut(s)	97, 1864, 2390
HspAI	GCGC	1 cut(s)	1478
Kpn2I	TCCGGA	1 cut(s)	496
Kzo9I	GATC	8 cut(s)	169, 540, 868, 934, 1321, 1659, 1878, 2473
Lsp1109I	GCAGC	6 cut(s)	112, 393, 482, 2244, 2244, 2603
LweI	GCATC	5 cut(s)	269, 409, 1234, 2244, 2269
MaeI	CTAG	3 cut(s)	111, 474, 1011
MaeII	ACGT	3 cut(s)	97, 1864, 2390
MaeIII	GTNAC	4 cut(s)	59, 1406, 2525, 2659
MalI	GATC	8 cut(s)	171, 542, 870, 936, 1323, 1661, 1880, 2475
MboI	GATC	8 cut(s)	169, 540, 868, 934, 1321, 1659, 1878, 2473
MfeI	CAATTG	1 cut(s)	723
MflI	RGATCY	2 cut(s)	540, 1659
MhlI	GDGCHC	1 cut(s)	1440
MlyI	GAGTC	3 cut(s)	230, 618, 2409
MmeI	TCCRAC	4 cut(s)	1082, 1714, 2002, 2383
Mph1103I	ATGCAT	5 cut(s)	262, 402, 624, 1249, 1491
MroI	TCCGGA	1 cut(s)	496
MroXI	GAANNNNTTC	3 cut(s)	816, 1109, 1266
MslI	CAYNNNNRTG	4 cut(s)	120, 405, 1578, 1668
MspI	CCGG	7 cut(s)	436, 497, 613, 986, 1547, 1943, 2372
MspR9I	CCNGG	5 cut(s)	437, 614, 987, 1548, 1943
MunI	CAATTG	1 cut(s)	723
MvnI	CGCG	1 cut(s)	2550
MwoI	GCNNNNNNNGC	1 cut(s)	1486
NciI	CCSGG	5 cut(s)	437, 614, 987, 1548, 1943
NcoI	CCATGG	1 cut(s)	2172
NdeII	GATC	8 cut(s)	169, 540, 868, 934, 1321, 1659, 1878, 2473
NlaIV	GGNNCC	3 cut(s)	1769, 2026, 2170
NmuCI	GTSAC	2 cut(s)	1406, 2659
NsiI	ATGCAT	5 cut(s)	262, 402, 624, 1249, 1491
NspI	RCATGY	2 cut(s)	1356, 1592
PaeR7I	CTCGAG	1 cut(s)	606
PagI	TCATGA	1 cut(s)	2011
PceI	AGGCCT	2 cut(s)	1179, 1629
PciI	ACATGT	1 cut(s)	1588
PdmI	GAANNNNTTC	3 cut(s)	816, 1109, 1266
PfoI	TCCNGGA	2 cut(s)	612, 1941
PinAI	ACCGGT	1 cut(s)	2371
PkrI	GCNGC	6 cut(s)	127, 383, 472, 2234, 2259, 2618
PleI	GAGTC	3 cut(s)	229, 617, 2408
PpsI	GAGTC	3 cut(s)	229, 617, 2408
Ppu21I	YACGTR	1 cut(s)	98
PscI	ACATGT	1 cut(s)	1588
PsiI	TTATAA	1 cut(s)	1385
PspN4I	GGNNCC	3 cut(s)	1769, 2026, 2170
PspPI	GGNCC	4 cut(s)	194, 333, 433, 983
PstNI	CAGNNNCTG	1 cut(s)	2277
PsuI	RGATCY	2 cut(s)	540, 1659
RsaI	GTAC	4 cut(s)	441, 1415, 1781, 2370
RsaNI	GTAC	4 cut(s)	440, 1414, 1780, 2369
RseI	CAYNNNNRTG	4 cut(s)	120, 405, 1578, 1668
SatI	GCNGC	6 cut(s)	126, 382, 471, 2233, 2258, 2617
Sau3AI	GATC	8 cut(s)	169, 540, 868, 934, 1321, 1659, 1878, 2473
Sau96I	GGNCC	4 cut(s)	194, 333, 433, 983
SchI	GAGTC	3 cut(s)	230, 618, 2409
ScrFI	CCNGG	5 cut(s)	437, 614, 987, 1548, 1943
SduI	GDGCHC	1 cut(s)	1440
SfaNI	GCATC	5 cut(s)	269, 409, 1234, 2244, 2269
SfcI	CTRYAG	2 cut(s)	591, 2198
Sfr274I	CTCGAG	1 cut(s)	606
SinI	GGWCC	3 cut(s)	194, 433, 983
SlaI	CTCGAG	1 cut(s)	606
SmiMI	CAYNNNNRTG	4 cut(s)	120, 405, 1578, 1668
SmlI	CTYRAG	4 cut(s)	73, 606, 941, 2264
SmoI	CTYRAG	4 cut(s)	73, 606, 941, 2264
SseBI	AGGCCT	2 cut(s)	1179, 1629
SsiI	CCGC	1 cut(s)	710
SspI	AATATT	2 cut(s)	529, 2653
SspMI	CTAG	3 cut(s)	111, 474, 1011
StuI	AGGCCT	2 cut(s)	1179, 1629
StyD4I	CCNGG	5 cut(s)	435, 612, 985, 1546, 1941
StyI	CCWWGG	1 cut(s)	2172
TaaI	ACNGT	5 cut(s)	167, 700, 1198, 1875, 2202
TaiI	ACGT	3 cut(s)	100, 1867, 2393
TaqI	TCGA	6 cut(s)	607, 733, 1500, 1624, 1717, 1877
TaqII	GACCGA	1 cut(s)	1137
TscAI	CASTG	5 cut(s)	1440, 1921, 2112, 2207, 2540
TseFI	GTSAC	2 cut(s)	1406, 2659
TseI	GCWGC	6 cut(s)	125, 381, 470, 2232, 2257, 2616
Tsp45I	GTSAC	2 cut(s)	1406, 2659
TspRI	CASTG	5 cut(s)	1440, 1921, 2112, 2207, 2540
VpaK11BI	GGWCC	3 cut(s)	194, 433, 983
XapI	RAATTY	9 cut(s)	1073, 1105, 1266, 1720, 1963, 2571, 2642, 2670, 2684
XceI	RCATGY	2 cut(s)	1356, 1592
XhoI	CTCGAG	1 cut(s)	606
XmnI	GAANNNNTTC	3 cut(s)	816, 1109, 1266
XspI	CTAG	3 cut(s)	111, 474, 1011
Zsp2I	ATGCAT	5 cut(s)	262, 402, 624, 1249, 1491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.