Rorug06G0299400

Protein of unknown function (DUF1195)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0008668
Physical Location & Seq
Forward (+)
45172191 .. 45177837
5647 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0299400.1

Sequence Viewer

Length: 2904 bp
ATGGCGGCTTCTTCCTCTTCCACTGCTGTTATCCCCCACCGAGGAAAGCACGACGTGTTTCTCAGTTTCCGAGGCGAGGACACCCGCGACGGTTTCACCAGTCATCTTCATGCTGCTTTACTCCGGAGTAAAATTGAAACCTACATAGATAACAGACTCGAGAGAGGAGACGAAATCGGACCCGCTCTTCTCAAAGCAATAGAGGAATCAGAGCTGTCGGTAATCATTTTCTCGGAGAACTATGCCTCTTCTACATGGTGCTTGGATGAGCTTGTGCATATACTCAAATGCAAGAAGAAATATGGATGCTCTGTTATACCTGTTTTCTACCACGTAGATCCATCACATGTGCGGAAACAGGAGGGGAGTTATGCAGCTGCCTTTGCTCCACTTGAACAACGTTTCAAGAATAACATGGACAAGGTGCGCCAAATCCGCCAATGGAGGGATGCTTTGACAAGTGCTGCAAATCTATCTGGGTTTGATTCTCACAATATAAAGCCTGAATCCAAGTTAGTTGAGGATATTGTTGATGCTATTTTAGAGAAATTGAATCGTGGATCATCCAGTGTTTTGAAGGGCCTGGTAGGGATGAAAAGCCGCGTTCGGGAAGTTGAAATGTTGTTGTGTTTGGACTCTCTAGATGTCAGGACGGTAGGAATTTGGGGTATGGGTGGTGTAGGTAAGACCACCCTTGCTCGTGCTGTATTTGACCATTTCTCTTTGGAATTTGAAGCTTGTTGCTTCATTGGAGATATTAAGGAAACATCAGAGACTCAGTTGCAAAAGGAGCTTCTTCGTGGTTTGTTAGACGAAAAAAATCTGAATATGGGCACTATATCTGTAAGATCAACTCCTGTTAGACGGAGGCTCGGCCGTAAGAAGGTCCTCATTGTTCTTGATGATGTGAATTATTCAAGGCAACTGGATTTTTTAGCTGGGGATGATGCTCAGTTTGGTCCTGGAAGTAGAATCATTATAACAGCTAGAGATATGCAACTACTTAAGAGTGGAGGAGCGGACAAGATATACAAAGTTGAGCAATTAAATGAATATGAAGCCCTTCAGCTTTTTCAAGAAAATGCTTTCAAAAATATGTGTCCTCCATCTGAATATACAGAATTGTCAAGAATGGTGGTAAGTTATGCTGATGGCATTCCGTTGGCTCTTAAGGTTTTGGGTTCCCTATTGCACTGCAAGACTAAAAGAGAATGGAAAAGTGAATTGATTAAACTGGAAAAGATTCCCAACAAAAGAATTCAGGATGTGTTGAGAGTAAGTTATGATGGATTAGATGAGGAACAGAAAGAGATATTTCTTGAGATTGCATGTTTTTATAAAGGGGAGAAGATAGATTATGCACAAAGAATGTTGGATACTTGCGGCTTCTGTGCTGATGCGGGAATTGAAGATCTGATTGACATGTCTCTCATATCAATCAAAAACAACTACCTGTGGATGCATGATTTGATACAAGAAATGGGTCGTGCAATTGTCCGTGAACCTAAGGAGCGTGGAAGACACAGTAGGTTGTGGATTGCTGAGGATATCTGTCCAGTATTCAAAAATAATACAGGAACGGGAACAATTGAAGCCATATTCCTTGATATATCTAAGATTACAAAGCTGCATGTGAGAGGTGCAGCCTTCAAAGACATGCATAATCTAAGATTGCTCAAAATTTATAATTCTGGTGATGAATTTCCTGAGAAGCGATGCAAAATGTACCTTCCCGAAGGCCTTTCGTCTCTTCCTGATGCCCTTAAATATCTCTACTGGGATGGATATCCTTTGAAATCACTGCCATCAGAATTTTCTCCGGACAATCTTGTTGAGCTGCATATGCCCAATGGCCAAGTTGAACAACTTTGGACTGAAGACCAGAATCTTGGGAAGTTGAGAAGGATAAATCTTAGTCATTCCAAGAACCTAATTAAAGTTCCGGATCTCTCTCAGAGTCCTATTGAGGATATAGAACTTCAGAACTGTACAAGTTTAGTTCAAGTCCCTACATATTTTCAAAATCTTGACAAGCTTACCTCTCTGAATCTTAGTGGCTGCTCAAGTCTTAAACATCTTCCAGATATGCCAGTGAATATGACTACCTTATATTTACATGGAACTGCAATAGAAGAGTTGCCTGCATCAATTTGGTCCCACAAGAAGCTTGTATCATTAGACCTGATGTACTGTCAAGACCTTAAGAATCTTCCGAGCAGCACTTGCAACCTGGATTCTCTCCAAATTCTTGGTCTACTTGGCTGCTCAACTCTTGGCAGATTTTCAGAACTTCCCAGGAATATAAGACATTTATGTTTGACTGGGACAGGAATTGAAGAAGTACCCTCATCAATCGGGTGTGTCTCTGGGCTCGTTTCAATTCAACTGGAATATTGCAAAAAGTTTGTGACGCTGCCTACCAGCATTTGTAAGTTGAAATCTCTCGAGAGACTTTCTCTCTTTGGTTGCTGTAAATTCAAGGACTTCCCAGAAATCTTGGAGCCTATGGAGCGTCTGGAGTTTTTAAATCTAAGTAAAACAGCGATTGAAGAGCTACCCATGTCGACTGAAAATCTAGTCGGGCTAAAAAAGTTGGAGCTGTTTAACTGCAAAAACCTCCGGTTTGTCCCTGGCAGTATCTACAAATTAAAAACTGTGGTCCTCGATGGTTGTTGGAAACTCAGTTTTTTTAAGTTGGAGCGTTTCAGGCCTATGGGTCTGAAGTATCTAAGTCTCTCTCCCTATCTGGTCTCTCTCTGGGTTTCTCCAGACCCTGGAGAGAGAGACTCAGGAGACCTTGGGCTCTGGAGAGAGATCCTGGAGTTCTGTCTGGAGAGATCTCTCCAGACCCTGTCTCTCAAGAGACCTTGGGTTCTGCCAGAGATGAGATTCGGTGACGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1195

Protein Analysis

967

Amino Acids

109.66

Weight (kDa)

6.61

Isoelectric Point (pI)

46.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 16 - 196 2.5e-55 TIR domain
TIR_2 PF13676 19 - 114 4.9e-13 TIR domain
NB-ARC PF00931 213 - 365 1.8e-22 NB-ARC domain
WHD_ROQ1 PF23282 433 - 501 1.6e-23 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 678 - 758 3.2e-06 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 768 - 842 2.3e-06 Leucine-rich repeat region
LRR_13 PF23286 812 - 890 2.4e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 980, 1338, 1686
AccB7I CCANNNNNTGG 1 cut(s) 2774
AccBSI CCGCTC 2 cut(s) 185, 1019
AccI GTMKAC 2 cut(s) 2254, 2564
AccII CGCG 2 cut(s) 87, 603
AccIII TCCGGA 3 cut(s) 123, 1819, 1942
AciI CCGC 9 cut(s) 5, 85, 183, 352, 436, 601, 1019, 1383, 1400
AclI AACGTT 1 cut(s) 400
AclWI GGATC 4 cut(s) 332, 568, 1953, 2809
AcoI YGGCCR 2 cut(s) 874, 1852
AcsI RAATTY 8 cut(s) 660, 728, 1257, 1680, 1700, 1811, 2244, 2474
AcuI CTGAAG 4 cut(s) 1049, 1896, 1964, 2741
AdeI CACNNNGTG 1 cut(s) 55
AfaI GTAC 4 cut(s) 1727, 1990, 2189, 2343
AfiI CCNNNNNNNGG 6 cut(s) 41, 76, 445, 607, 883, 2774
AflII CTTAAG 3 cut(s) 1004, 1169, 2201
AflIII ACRYGT 4 cut(s) 54, 346, 1422, 2898
AjiI CACGTC 2 cut(s) 55, 2899
AjnI CCWGG 7 cut(s) 582, 961, 2229, 2294, 2629, 2773, 2817
AlwI GGATC 4 cut(s) 332, 568, 1953, 2809
AlwNI CAGNNNCTG 2 cut(s) 2774, 2851
Ama87I CYCGRG 2 cut(s) 158, 2444
Aor13HI TCCGGA 3 cut(s) 123, 1819, 1942
AoxI GGCC 5 cut(s) 580, 874, 1738, 1852, 2708
ApoI RAATTY 8 cut(s) 660, 728, 1257, 1680, 1700, 1811, 2244, 2474
ArsI GACNNNNNNTTYG 2 cut(s) 2236, 2268
Asp700I GAANNNNTTC 2 cut(s) 1062, 1242
AspLEI GCGC 1 cut(s) 429
AspS9I GGNCC 6 cut(s) 179, 580, 886, 959, 2154, 2659
AsuHPI GGTGA 2 cut(s) 88, 1706
AvaI CYCGRG 2 cut(s) 158, 2444
AvaII GGWCC 5 cut(s) 179, 886, 959, 2154, 2659
AxyI CCTNAGG 1 cut(s) 1506
BaeGI GKGCMC 1 cut(s) 836
BalI TGGCCA 1 cut(s) 1854
BanII GRGCYC 2 cut(s) 2373, 2805
BauI CACGAG 1 cut(s) 699
BbsI GAAGAC 2 cut(s) 1525, 1884
BbvCI CCTCAGC 1 cut(s) 1542
BccI CCATC 7 cut(s) 349, 1114, 1145, 1280, 1775, 1813, 2660
BceAI ACGGC 1 cut(s) 861
BciT130I CCWGG 7 cut(s) 584, 963, 2231, 2296, 2631, 2775, 2819
BciVI GTATCC 1 cut(s) 1369
BfaI CTAG 3 cut(s) 641, 987, 2576
BfrI CTTAAG 3 cut(s) 1004, 1169, 2201
BfuI GTATCC 1 cut(s) 1369
BglII AGATCT 2 cut(s) 1411, 2837
Bme1390I CCNGG 7 cut(s) 584, 963, 2231, 2296, 2631, 2775, 2819
Bme18I GGWCC 5 cut(s) 179, 886, 959, 2154, 2659
BmeT110I CYCGRG 2 cut(s) 158, 2444
BmgBI CACGTC 2 cut(s) 55, 2899
BmgT120I GGNCC 6 cut(s) 179, 580, 886, 959, 2154, 2659
BmiI GGNNCC 4 cut(s) 181, 1183, 2156, 2502
BmrFI CCNGG 7 cut(s) 584, 963, 2231, 2296, 2631, 2775, 2819
BmrI ACTGGG 2 cut(s) 1786, 2331
BmsI GCATC 9 cut(s) 296, 439, 523, 937, 1387, 1449, 1706, 1747, 2153
BmuI ACTGGG 2 cut(s) 1786, 2331
BpiI GAAGAC 2 cut(s) 1525, 1884
BplI GAGNNNNNCTC 4 cut(s) 2440, 2472, 2771, 2803
BpmI CTGGAG 7 cut(s) 2537, 2751, 2796, 2827, 2828, 2840, 2852
Bpu10I CCTNAGC 1 cut(s) 1542
BpuEI CTTGAG 3 cut(s) 1340, 2047, 2843
BsaAI YACGTR 1 cut(s) 334
BsaBI GATNNNNATC 1 cut(s) 1785
BsaI GGTCTC 3 cut(s) 2755, 2787, 2857
BsaJI CCNNGG 7 cut(s) 40, 70, 2294, 2629, 2773, 2797, 2867
BsaWI WCCGGW 4 cut(s) 123, 1819, 1942, 2619
Bsc4I CCNNNNNNNGG 6 cut(s) 41, 76, 445, 607, 883, 2774
Bse1I ACTGG 9 cut(s) 99, 567, 930, 1239, 1556, 1781, 2090, 2326, 2391
Bse21I CCTNAGG 1 cut(s) 1506
Bse8I GATNNNNATC 1 cut(s) 1785
BseAI TCCGGA 3 cut(s) 123, 1819, 1942
BseBI CCWGG 7 cut(s) 584, 963, 2231, 2296, 2631, 2775, 2819
BseDI CCNNGG 7 cut(s) 40, 70, 2294, 2629, 2773, 2797, 2867
BseGI GGATG 9 cut(s) 271, 311, 454, 563, 597, 949, 1270, 1464, 1786
BseJI GATNNNNATC 1 cut(s) 1785
BseLI CCNNNNNNNGG 6 cut(s) 41, 76, 445, 607, 883, 2774
BseMII CTCAG 8 cut(s) 76, 791, 965, 1533, 1698, 1967, 2695, 2802
BseNI ACTGG 9 cut(s) 99, 567, 930, 1239, 1556, 1781, 2090, 2326, 2391
BseRI GAGGAG 2 cut(s) 180, 1029
BseSI GKGCMC 1 cut(s) 836
BseX3I CGGCCG 1 cut(s) 874
BseYI CCCAGC 1 cut(s) 938
BsgI GTGCAG 1 cut(s) 1662
Bsh1236I CGCG 2 cut(s) 87, 603
Bsh1285I CGRYCG 1 cut(s) 877
BshFI GGCC 5 cut(s) 582, 876, 1740, 1854, 2710
BsiEI CGRYCG 1 cut(s) 877
BsiHKCI CYCGRG 2 cut(s) 158, 2444
BsiSI CCGG 4 cut(s) 124, 1820, 1943, 2620
BslFI GGGAC 4 cut(s) 1991, 2140, 2338, 2612
BslI CCNNNNNNNGG 6 cut(s) 41, 76, 445, 607, 883, 2774
BsmBI CGTCTC 2 cut(s) 162, 1752
BsmFI GGGAC 4 cut(s) 1991, 2140, 2338, 2612
BsmI GAATGC 1 cut(s) 1155
BsnI GGCC 5 cut(s) 582, 876, 1740, 1854, 2710
Bso31I GGTCTC 3 cut(s) 2755, 2787, 2857
BsoBI CYCGRG 2 cut(s) 158, 2444
Bsp1286I GDGCHC 3 cut(s) 836, 2373, 2805
Bsp13I TCCGGA 3 cut(s) 123, 1819, 1942
Bsp1407I TGTACA 1 cut(s) 1988
Bsp143I GATC 7 cut(s) 337, 560, 848, 1411, 1945, 2814, 2837
BspACI CCGC 9 cut(s) 5, 85, 183, 352, 436, 601, 1019, 1383, 1400
BspANI GGCC 5 cut(s) 582, 876, 1740, 1854, 2710
BspCNI CTCAG 8 cut(s) 75, 790, 964, 1534, 1699, 1966, 2694, 2801
BspEI TCCGGA 3 cut(s) 123, 1819, 1942
BspFNI CGCG 2 cut(s) 87, 603
BspLI GGNNCC 4 cut(s) 181, 1183, 2156, 2502
BspPI GGATC 4 cut(s) 332, 568, 1953, 2809
BspQI GCTCTTC 2 cut(s) 192, 2544
BspTI CTTAAG 3 cut(s) 1004, 1169, 2201
BspTNI GGTCTC 3 cut(s) 2755, 2787, 2857
BsrBI CCGCTC 2 cut(s) 185, 1019
BsrGI TGTACA 1 cut(s) 1988
BsrI ACTGG 9 cut(s) 99, 567, 930, 1239, 1556, 1781, 2090, 2326, 2391
BssECI CCNNGG 7 cut(s) 40, 70, 2294, 2629, 2773, 2797, 2867
BssMI GATC 7 cut(s) 337, 560, 848, 1411, 1945, 2814, 2837
BssSI CACGAG 1 cut(s) 699
BssT1I CCWWGG 2 cut(s) 2797, 2867
Bst2BI CACGAG 1 cut(s) 699
Bst2UI CCWGG 7 cut(s) 584, 963, 2231, 2296, 2631, 2775, 2819
Bst4CI ACNGT 6 cut(s) 92, 655, 1526, 1988, 2192, 2656
Bst6I CTCTTC 6 cut(s) 22, 192, 253, 1755, 2127, 2544
BstAFI CTTAAG 3 cut(s) 1004, 1169, 2201
BstAPI GCANNNNNTGC 1 cut(s) 2223
BstAUI TGTACA 1 cut(s) 1988
BstBAI YACGTR 1 cut(s) 334
BstC8I GCNNGC 1 cut(s) 2142
BstF5I GGATG 9 cut(s) 271, 311, 454, 563, 597, 949, 1270, 1464, 1786
BstFNI CGCG 2 cut(s) 87, 603
BstHHI GCGC 1 cut(s) 429
BstKTI GATC 7 cut(s) 340, 563, 851, 1414, 1948, 2817, 2840
BstMBI GATC 7 cut(s) 337, 560, 848, 1411, 1945, 2814, 2837
BstMCI CGRYCG 1 cut(s) 877
BstMWI GCNNNNNNNGC 7 cut(s) 383, 435, 790, 1843, 2223, 2509, 2707
BstNI CCWGG 7 cut(s) 584, 963, 2231, 2296, 2631, 2775, 2819
BstNSI RCATGY 5 cut(s) 350, 1332, 1426, 1634, 1660
BstSCI CCNGG 7 cut(s) 582, 961, 2229, 2294, 2629, 2773, 2817
BstSLI GKGCMC 1 cut(s) 836
BstUI CGCG 2 cut(s) 87, 603
BstV2I GAAGAC 2 cut(s) 1525, 1884
BstX2I RGATCY 5 cut(s) 337, 1411, 1945, 2814, 2837
BstXI CCANNNNNNTGG 2 cut(s) 1889, 2249
BstYI RGATCY 5 cut(s) 337, 1411, 1945, 2814, 2837
BstZI CGGCCG 1 cut(s) 874
Bsu36I CCTNAGG 1 cut(s) 1506
BsuI GTATCC 1 cut(s) 1369
BsuRI GGCC 5 cut(s) 582, 876, 1740, 1854, 2710
BtgZI GCGATG 1 cut(s) 1729
BtrI CACGTC 2 cut(s) 55, 2899
BtsCI GGATG 9 cut(s) 271, 311, 454, 563, 597, 949, 1270, 1464, 1786
BtsI GCAGTG 3 cut(s) 21, 1192, 1799
BtsIMutI CAGTG 5 cut(s) 21, 574, 1192, 1799, 2097
Cac8I GCNNGC 1 cut(s) 2142
CaiI CAGNNNCTG 2 cut(s) 2774, 2851
CfoI GCGC 1 cut(s) 429
Cfr13I GGNCC 6 cut(s) 179, 580, 886, 959, 2154, 2659
CseI GACGC 2 cut(s) 2419, 2501
Csp6I GTAC 4 cut(s) 1726, 1989, 2188, 2342
CspCI CAANNNNNGTGG 2 cut(s) 1116, 1151
CviQI GTAC 4 cut(s) 1726, 1989, 2188, 2342
DpnI GATC 7 cut(s) 339, 562, 850, 1413, 1947, 2816, 2839
DpnII GATC 7 cut(s) 337, 560, 848, 1411, 1945, 2814, 2837
DraI TTTAAA 1 cut(s) 2526
DraIII CACNNNGTG 1 cut(s) 55
EaeI YGGCCR 2 cut(s) 874, 1852
EagI CGGCCG 1 cut(s) 874
Eam1104I CTCTTC 6 cut(s) 22, 192, 253, 1755, 2127, 2544
EarI CTCTTC 6 cut(s) 22, 192, 253, 1755, 2127, 2544
EciI GGCGGA 1 cut(s) 425
EclXI CGGCCG 1 cut(s) 874
Eco130I CCWWGG 2 cut(s) 2797, 2867
Eco147I AGGCCT 2 cut(s) 1740, 2710
Eco24I GRGCYC 2 cut(s) 2373, 2805
Eco31I GGTCTC 3 cut(s) 2755, 2787, 2857
Eco32I GATATC 2 cut(s) 1549, 1787
Eco47I GGWCC 5 cut(s) 179, 886, 959, 2154, 2659
Eco52I CGGCCG 1 cut(s) 874
Eco57I CTGAAG 4 cut(s) 1049, 1896, 1964, 2741
Eco81I CCTNAGG 1 cut(s) 1506
Eco88I CYCGRG 2 cut(s) 158, 2444
EcoO109I RGGNCCY 2 cut(s) 580, 886
EcoRI GAATTC 1 cut(s) 1257
EcoRII CCWGG 7 cut(s) 582, 961, 2229, 2294, 2629, 2773, 2817
EcoRV GATATC 2 cut(s) 1549, 1787
EcoT14I CCWWGG 2 cut(s) 2797, 2867
EcoT22I ATGCAT 2 cut(s) 1464, 1662
EcoT38I GRGCYC 2 cut(s) 2373, 2805
ErhI CCWWGG 2 cut(s) 2797, 2867
Esp3I CGTCTC 2 cut(s) 162, 1752
FaqI GGGAC 4 cut(s) 1991, 2140, 2338, 2612
FauI CCCGC 3 cut(s) 92, 190, 1393
FauNDI CATATG 1 cut(s) 1842
FblI GTMKAC 2 cut(s) 2254, 2564
FokI GGATG 9 cut(s) 278, 318, 461, 550, 604, 956, 1277, 1471, 1793
FriOI GRGCYC 2 cut(s) 2373, 2805
FspBI CTAG 3 cut(s) 641, 987, 2576
GlaI GCGC 1 cut(s) 428
GsaI CCCAGC 1 cut(s) 942
GsuI CTGGAG 7 cut(s) 2537, 2751, 2796, 2827, 2828, 2840, 2852
HaeIII GGCC 5 cut(s) 582, 876, 1740, 1854, 2710
HapII CCGG 4 cut(s) 124, 1820, 1943, 2620
HgaI GACGC 2 cut(s) 2419, 2501
HhaI GCGC 1 cut(s) 429
Hin6I GCGC 1 cut(s) 427
HinP1I GCGC 1 cut(s) 427
HincII GTYRAC 1 cut(s) 2565
HindII GTYRAC 1 cut(s) 2565
HindIII AAGCTT 3 cut(s) 735, 2033, 2165
HpaII CCGG 4 cut(s) 124, 1820, 1943, 2620
HphI GGTGA 2 cut(s) 88, 1706
Hpy166II GTNNAC 3 cut(s) 1502, 2255, 2565
Hpy8I GTNNAC 3 cut(s) 1502, 2255, 2565
Hpy99I CGWCG 2 cut(s) 56, 92
HpyAV CCTTC 7 cut(s) 571, 877, 1073, 1657, 1730, 1739, 1896
HpyCH4III ACNGT 6 cut(s) 92, 655, 1526, 1988, 2192, 2656
HpyCH4IV ACGT 4 cut(s) 54, 333, 400, 2898
HpyF10VI GCNNNNNNNGC 7 cut(s) 383, 435, 790, 1843, 2223, 2509, 2707
HpySE526I ACGT 4 cut(s) 54, 333, 400, 2898
HspAI GCGC 1 cut(s) 427
Kpn2I TCCGGA 3 cut(s) 123, 1819, 1942
Kzo9I GATC 7 cut(s) 337, 560, 848, 1411, 1945, 2814, 2837
LguI GCTCTTC 2 cut(s) 192, 2544
LmnI GCTCC 8 cut(s) 391, 790, 1016, 1510, 2500, 2509, 2596, 2698
LweI GCATC 9 cut(s) 296, 439, 523, 937, 1387, 1449, 1706, 1747, 2153
MaeI CTAG 3 cut(s) 641, 987, 2576
MaeII ACGT 4 cut(s) 54, 333, 400, 2898
MaeIII GTNAC 2 cut(s) 2407, 2894
MalI GATC 7 cut(s) 339, 562, 850, 1413, 1947, 2816, 2839
MbiI CCGCTC 2 cut(s) 185, 1019
MboI GATC 7 cut(s) 337, 560, 848, 1411, 1945, 2814, 2837
MfeI CAATTG 2 cut(s) 1491, 1587
MflI RGATCY 5 cut(s) 337, 1411, 1945, 2814, 2837
MhlI GDGCHC 3 cut(s) 836, 2373, 2805
MlsI TGGCCA 1 cut(s) 1854
MluNI TGGCCA 1 cut(s) 1854
MlyI GAGTC 5 cut(s) 150, 629, 769, 1966, 2780
MmeI TCCRAC 4 cut(s) 1353, 2574, 2654, 2676
Mox20I TGGCCA 1 cut(s) 1854
Mph1103I ATGCAT 2 cut(s) 1464, 1662
MroI TCCGGA 3 cut(s) 123, 1819, 1942
MroXI GAANNNNTTC 2 cut(s) 1062, 1242
MscI TGGCCA 1 cut(s) 1854
MslI CAYNNNNRTG 1 cut(s) 108
Msp20I TGGCCA 1 cut(s) 1854
MspA1I CMGCKG 1 cut(s) 377
MspCI CTTAAG 3 cut(s) 1004, 1169, 2201
MspI CCGG 4 cut(s) 124, 1820, 1943, 2620
MspR9I CCNGG 7 cut(s) 584, 963, 2231, 2296, 2631, 2775, 2819
MunI CAATTG 2 cut(s) 1491, 1587
Mva1269I GAATGC 1 cut(s) 1155
MvaI CCWGG 7 cut(s) 584, 963, 2231, 2296, 2631, 2775, 2819
MvnI CGCG 2 cut(s) 87, 603
MwoI GCNNNNNNNGC 7 cut(s) 383, 435, 790, 1843, 2223, 2509, 2707
NdeI CATATG 1 cut(s) 1842
NdeII GATC 7 cut(s) 337, 560, 848, 1411, 1945, 2814, 2837
NlaIV GGNNCC 4 cut(s) 181, 1183, 2156, 2502
NmeAIII GCCGAG 1 cut(s) 852
NmuCI GTSAC 2 cut(s) 2407, 2894
NsiI ATGCAT 2 cut(s) 1464, 1662
NspI RCATGY 5 cut(s) 350, 1332, 1426, 1634, 1660
PaeR7I CTCGAG 2 cut(s) 158, 2444
PceI AGGCCT 2 cut(s) 1740, 2710
PciI ACATGT 2 cut(s) 346, 1422
PciSI GCTCTTC 2 cut(s) 192, 2544
PctI GAATGC 1 cut(s) 1155
PdmI GAANNNNTTC 2 cut(s) 1062, 1242
PflFI GACNNNGTC 1 cut(s) 2851
PflMI CCANNNNNTGG 1 cut(s) 2774
PfoI TCCNGGA 2 cut(s) 961, 2817
PleI GAGTC 5 cut(s) 150, 629, 769, 1965, 2780
PpsI GAGTC 5 cut(s) 150, 629, 769, 1965, 2780
Ppu21I YACGTR 1 cut(s) 334
PpuMI RGGWCCY 1 cut(s) 886
PscI ACATGT 2 cut(s) 346, 1422
PsiI TTATAA 3 cut(s) 980, 1338, 1686
Psp1406I AACGTT 1 cut(s) 400
Psp5II RGGWCCY 1 cut(s) 886
Psp6I CCWGG 7 cut(s) 582, 961, 2229, 2294, 2629, 2773, 2817
PspFI CCCAGC 1 cut(s) 938
PspGI CCWGG 7 cut(s) 582, 961, 2229, 2294, 2629, 2773, 2817
PspN4I GGNNCC 4 cut(s) 181, 1183, 2156, 2502
PspPI GGNCC 6 cut(s) 179, 580, 886, 959, 2154, 2659
PspPPI RGGWCCY 1 cut(s) 886
PstNI CAGNNNCTG 2 cut(s) 2774, 2851
PsuI RGATCY 5 cut(s) 337, 1411, 1945, 2814, 2837
PsyI GACNNNGTC 1 cut(s) 2851
PvuII CAGCTG 1 cut(s) 377
RsaI GTAC 4 cut(s) 1727, 1990, 2189, 2343
RsaNI GTAC 4 cut(s) 1726, 1989, 2188, 2342
RseI CAYNNNNRTG 1 cut(s) 108
SalI GTCGAC 1 cut(s) 2563
SapI GCTCTTC 2 cut(s) 192, 2544
Sau3AI GATC 7 cut(s) 337, 560, 848, 1411, 1945, 2814, 2837
Sau96I GGNCC 6 cut(s) 179, 580, 886, 959, 2154, 2659
SchI GAGTC 5 cut(s) 150, 629, 769, 1966, 2780
ScrFI CCNGG 7 cut(s) 584, 963, 2231, 2296, 2631, 2775, 2819
SduI GDGCHC 3 cut(s) 836, 2373, 2805
SfaNI GCATC 9 cut(s) 296, 439, 523, 937, 1387, 1449, 1706, 1747, 2153
Sfr274I CTCGAG 2 cut(s) 158, 2444
SinI GGWCC 5 cut(s) 179, 886, 959, 2154, 2659
SlaI CTCGAG 2 cut(s) 158, 2444
SmiMI CAYNNNNRTG 1 cut(s) 108
SmlI CTYRAG 8 cut(s) 158, 1004, 1169, 1319, 2062, 2201, 2444, 2858
SmoI CTYRAG 8 cut(s) 158, 1004, 1169, 1319, 2062, 2201, 2444, 2858
SseBI AGGCCT 2 cut(s) 1740, 2710
SsiI CCGC 9 cut(s) 5, 85, 183, 352, 436, 601, 1019, 1383, 1400
SspI AATATT 1 cut(s) 2393
SspMI CTAG 3 cut(s) 641, 987, 2576
StuI AGGCCT 2 cut(s) 1740, 2710
StyD4I CCNGG 7 cut(s) 582, 961, 2229, 2294, 2629, 2773, 2817
StyI CCWWGG 2 cut(s) 2797, 2867
TaaI ACNGT 6 cut(s) 92, 655, 1526, 1988, 2192, 2656
TaiI ACGT 4 cut(s) 57, 336, 403, 2901
TaqI TCGA 4 cut(s) 159, 2445, 2564, 2664
TatI WGTACW 2 cut(s) 1988, 2187
TauI GCSGC 3 cut(s) 8, 603, 1386
TscAI CASTG 5 cut(s) 28, 574, 1199, 1806, 2097
TseFI GTSAC 2 cut(s) 2407, 2894
Tsp45I GTSAC 2 cut(s) 2407, 2894
TspDTI ATGAA 6 cut(s) 98, 608, 736, 1065, 1071, 1713
TspGWI ACGGA 3 cut(s) 880, 1149, 1487
TspRI CASTG 5 cut(s) 28, 574, 1199, 1806, 2097
Tth111I GACNNNGTC 1 cut(s) 2851
Van91I CCANNNNNTGG 1 cut(s) 2774
Vha464I CTTAAG 3 cut(s) 1004, 1169, 2201
VpaK11BI GGWCC 5 cut(s) 179, 886, 959, 2154, 2659
XapI RAATTY 8 cut(s) 660, 728, 1257, 1680, 1700, 1811, 2244, 2474
XbaI TCTAGA 1 cut(s) 640
XceI RCATGY 5 cut(s) 350, 1332, 1426, 1634, 1660
XhoI CTCGAG 2 cut(s) 158, 2444
XmiI GTMKAC 2 cut(s) 2254, 2564
XmnI GAANNNNTTC 2 cut(s) 1062, 1242
XspI CTAG 3 cut(s) 641, 987, 2576
Zsp2I ATGCAT 2 cut(s) 1464, 1662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.