Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0010820

Physical Location & Seq

Genomic Coordinates Forward (+)

48632430 .. 48634106

Gene Structure 1677 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0333800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGGATCCTGGACCAACATCAAGATCGGTTCTTTTGGGATTTCTTCTACTTGTCTCTTTGATTCTACATGTTTCCGGCAACTTCGTCTTCCCGGTGAGTCACAAGTTCCAGGGCCGCCGCGGGCAGTGGTCACTTAGTGAGTTAAAAGCCCACGACGCTCGGCGCCACGGCCGGAACCTCATCTCTGTTTCGTCATCAGCTGTGGATCTGGAACTGGGCGGCAACGGCCACCCTTCCGAGACCGGTCTCTACTTCGCCAAGCTCGGAATCGGATCCCCGTCGAAGGACTACTACGTGCAAGTCGACACCGGCAGCGACATTTTGTGGATCAATTGCATTGAGTGCGCCAATTGCCCCAAGAAAAGCGACATTGGAGTCAAGCTCACATTGTATGATCCAAAGGACTCTTCCACTTCCCAATCCATCACTTGTGATCAGGACTTTTGCACTTCGCAATACGATGGTCAGTTGCCGGGTTGTAAACCGGAGTTGCTGTGTCAATATAATGTGGTCTATGGGGATGGGAGCTCGACTGCAGGGTACTTTGTGAAGGATGTGATTGAGTTTGATAAGGTTAGTGGGAGTCATCAGACTTCGGTGGCGAATGGGAGCATAGTTTTCGGGTGTGGAGCTAAGCAGTCAGGGCAGCTAGGAAAGTCGTCTGAGGCGCTTGATGGGATTCTTGGTTTCGGGCAAGCGAAGTCGTCCATGATATCCCAGCTGGCTGCAGCTGGGAAGGTGAAGAAGCAGTTTGCGCATTGTTTGGACAATGTGAATGGGGGTGGCATTTTCGCAATTGGGGAAGTTGTGGAGACGAAATTGAAGCTGAACATGACTCCATTGGTGCCCAAAAGTGCGCATTACAATGTGGTCATGGAGGCGATTGAGGTGGGTGGTGTTGTTGTAGACCTGCCCTCGGATACATTTGACAGTGGAGACAAGGAAGGGACCATTATCGATAGTGGCACCACTTTGGCTTATCTTCCACAGGTGGTTTTTGAGCCGGTGATGAAAATGATACTGAGCAAGCAACCCCTTTTGAAGTTGCACACTGTTGAGGACCAGTTCACATGTTTTCAGTATTCGGAGAATGTGGATGATGGATTTCCGGTGGTGAAGTTTTATTTCAACAACTCGGTTTCGCTTTCGGTGTATCCCCATGAGTATTTGTTCCAATTGAAAGAGTATGTATGGTGTTCTGGGTGGCAGAGCAGTGGGATGAAAACCAAAGATGGAAGCTCCATGACTCTTTTGGGAGATTTGGTGCTCTCGAATAAGTTGGTGTTTTACGATCTTGAGAATCAGTCCATTGGGTGGATTGATTACAATTGCTCTTCAAGCATCAAAGTGAGGGATGACAGTTCGGGGGCAATATACTATGTTGGTGCACACAATATTTCTTCTGCTTCAGGTCTATTAATAGGATATGGGGATGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010498 GO:0010646 GO:0010648 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0023051 GO:0023057 GO:0030163 GO:0032446 GO:0033993 GO:0036211 GO:0042221 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0097305 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

479

Amino Acids

51.8

Weight (kDa)

5.3

Isoelectric Point (pI)

40.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	84 - 267	8.6e-40	Xylanase inhibitor N-terminal
Asp	PF00026	84 - 438	2.9e-23	Eukaryotic aspartyl protease
TAXi_C	PF14541	287 - 438	1.3e-19	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20910
fragaria_vesca	FvH4_2g37060
malus_domestica	MD08G1042800.v1.1 MD08G1045000.v1.1 MD08G1045700.v1.1 MD15G1046800.v1.1
prunus_persica	Prupe.1G401200_v2.0.a1 Prupe.1G401200_v2.0.a1
pyrus_communis	pycom15g04480
rosa_chinensis	RchiOBHm_Chr6g0304721
rosa_laevigata	RLG00000010956
rosa_multiflora	Rmu_co8160404.1_g000001 Rmu_sc0027256.1_g000001
rosa_roxburghii	Rroxscaffold_7G00163560
rosa_rugosa	Rorug06G0333800
rosa_samantha	Rh6AG445800 Rh6BG455900 Rh6CG458900 Rh6DG445900
rosa_wichuraiana	Rw6G038780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	374
Acc16I	TGCGCA	2 cut(s)	756, 858
Acc36I	ACCTGC	1 cut(s)	918
AccB1I	GGYRCC	3 cut(s)	162, 844, 965
AccB7I	CCANNNNNTGG	1 cut(s)	1314
AccI	GTMKAC	2 cut(s)	303, 906
AccII	CGCG	1 cut(s)	120
AciI	CCGC	4 cut(s)	115, 118, 120, 219
AclWI	GGATC	6 cut(s)	12, 213, 267, 280, 335, 389
AcoI	YGGCCR	2 cut(s)	169, 226
AcuI	CTGAAG	1 cut(s)	1392
AcyI	GRCGYC	1 cut(s)	163
AdeI	CACNNNGTG	1 cut(s)	137
AfaI	GTAC	1 cut(s)	542
AfiI	CCNNNNNNNGG	3 cut(s)	283, 916, 1314
AflIII	ACRYGT	2 cut(s)	67, 1070
AgeI	ACCGGT	1 cut(s)	242
AgsI	TTSAA	5 cut(s)	823, 1042, 1129, 1180, 1338
AjnI	CCWGG	2 cut(s)	7, 108
AjuI	GAANNNNNNNTTGG	2 cut(s)	391, 423
Alw21I	GWGCWC	3 cut(s)	530, 1269, 1390
Alw26I	GTCTC	5 cut(s)	58, 233, 251, 806, 930
Alw44I	GTGCAC	1 cut(s)	1386
AlwI	GGATC	6 cut(s)	12, 213, 267, 280, 335, 389
AoxI	GGCC	3 cut(s)	112, 169, 226
ApaLI	GTGCAC	1 cut(s)	1386
ApeKI	GCWGC	4 cut(s)	312, 646, 725, 728
AseI	ATTAAT	1 cut(s)	1418
AsiGI	ACCGGT	1 cut(s)	242
AspLEI	GCGC	5 cut(s)	165, 347, 670, 757, 859
AspS9I	GGNCC	4 cut(s)	11, 112, 948, 1060
AsuC2I	CCSGG	2 cut(s)	92, 474
AsuHPI	GGTGA	4 cut(s)	106, 751, 1018, 1126
AvaII	GGWCC	3 cut(s)	11, 948, 1060
BaeGI	GKGCMC	2 cut(s)	849, 1390
BamHI	GGATCC	2 cut(s)	4, 272
BanI	GGYRCC	3 cut(s)	162, 844, 965
BanII	GRGCYC	1 cut(s)	530
BarI	GAAGNNNNNNTAC	2 cut(s)	275, 307
BbsI	GAAGAC	1 cut(s)	79
Bbv12I	GWGCWC	3 cut(s)	530, 1269, 1390
BbvI	GCAGC	4 cut(s)	324, 658, 712, 740
BccI	CCATC	6 cut(s)	431, 455, 515, 668, 1094, 1226
BceAI	ACGGC	2 cut(s)	184, 241
BcgI	CGANNNNNNTGC	2 cut(s)	601, 635
BciT130I	CCWGG	2 cut(s)	9, 110
BciVI	GTATCC	2 cut(s)	913, 1164
BclI	TGATCA	1 cut(s)	433
BcnI	CCSGG	2 cut(s)	92, 474
BcoDI	GTCTC	5 cut(s)	58, 233, 251, 806, 930
BfaI	CTAG	2 cut(s)	650, 1438
BfmI	CTRYAG	2 cut(s)	534, 726
BfoI	RGCGCY	2 cut(s)	166, 671
BfuAI	ACCTGC	1 cut(s)	918
BfuI	GTATCC	2 cut(s)	913, 1164
BisI	GCNGC	7 cut(s)	115, 118, 220, 313, 647, 726, 729
BlpI	GCTNAGC	1 cut(s)	633
BlsI	GCNGC	7 cut(s)	116, 119, 221, 314, 648, 727, 730
Bme1390I	CCNGG	4 cut(s)	9, 92, 110, 474
Bme18I	GGWCC	3 cut(s)	11, 948, 1060
BmgT120I	GGNCC	4 cut(s)	11, 112, 948, 1060
BmiI	GGNNCC	7 cut(s)	6, 164, 176, 274, 846, 949, 967
BmrFI	CCNGG	4 cut(s)	9, 92, 110, 474
BmrI	ACTGGG	1 cut(s)	224
BmsI	GCATC	1 cut(s)	1350
BmuI	ACTGGG	1 cut(s)	224
BpiI	GAAGAC	1 cut(s)	79
BplI	GAGNNNNNCTC	2 cut(s)	366, 398
Bpu1102I	GCTNAGC	1 cut(s)	633
BpuEI	CTTGAG	1 cut(s)	1316
BpuMI	CCSGG	2 cut(s)	92, 474
Bsa29I	ATCGAT	1 cut(s)	957
BsaAI	YACGTR	1 cut(s)	295
BsaHI	GRCGYC	1 cut(s)	163
BsaI	GGTCTC	2 cut(s)	233, 251
BsaJI	CCNNGG	4 cut(s)	109, 118, 166, 915
BsaWI	WCCGGW	3 cut(s)	242, 484, 1108
BsaXI	ACNNNNNCTCC	4 cut(s)	479, 509, 1248, 1278
Bsc4I	CCNNNNNNNGG	3 cut(s)	283, 916, 1314
Bse118I	RCCGGY	3 cut(s)	242, 308, 1003
Bse1I	ACTGG	2 cut(s)	219, 1063
BseBI	CCWGG	2 cut(s)	9, 110
BseCI	ATCGAT	1 cut(s)	957
BseDI	CCNNGG	4 cut(s)	109, 118, 166, 915
BseGI	GGATG	6 cut(s)	526, 559, 1102, 1224, 1360, 1438
BseLI	CCNNNNNNNGG	3 cut(s)	283, 916, 1314
BseMII	CTCAG	2 cut(s)	654, 1013
BseNI	ACTGG	2 cut(s)	219, 1063
BseSI	GKGCMC	2 cut(s)	849, 1390
BseX3I	CGGCCG	1 cut(s)	169
BseXI	GCAGC	4 cut(s)	324, 658, 712, 740
BseYI	CCCAGC	2 cut(s)	717, 731
Bsh1236I	CGCG	1 cut(s)	120
Bsh1285I	CGRYCG	1 cut(s)	172
BshFI	GGCC	3 cut(s)	114, 171, 228
BshNI	GGYRCC	3 cut(s)	162, 844, 965
BshTI	ACCGGT	1 cut(s)	242
BshVI	ATCGAT	1 cut(s)	957
BsiEI	CGRYCG	1 cut(s)	172
BsiHKAI	GWGCWC	3 cut(s)	530, 1269, 1390
BsiSI	CCGG	9 cut(s)	75, 92, 172, 243, 309, 473, 485, 1004, 1109
BslFI	GGGAC	1 cut(s)	961
BslI	CCNNNNNNNGG	3 cut(s)	283, 916, 1314
BsmAI	GTCTC	5 cut(s)	58, 233, 251, 806, 930
BsmBI	CGTCTC	1 cut(s)	806
BsmFI	GGGAC	1 cut(s)	961
BsnI	GGCC	3 cut(s)	114, 171, 228
Bso31I	GGTCTC	2 cut(s)	233, 251
Bsp1286I	GDGCHC	4 cut(s)	530, 849, 1269, 1390
Bsp143I	GATC	8 cut(s)	4, 23, 205, 272, 327, 394, 433, 1291
Bsp1720I	GCTNAGC	1 cut(s)	633
BspACI	CCGC	4 cut(s)	115, 118, 120, 219
BspANI	GGCC	3 cut(s)	114, 171, 228
BspCNI	CTCAG	2 cut(s)	655, 1014
BspDI	ATCGAT	1 cut(s)	957
BspFNI	CGCG	1 cut(s)	120
BspLI	GGNNCC	7 cut(s)	6, 164, 176, 274, 846, 949, 967
BspMAI	CTGCAG	2 cut(s)	538, 730
BspMI	ACCTGC	1 cut(s)	918
BspPI	GGATC	6 cut(s)	12, 213, 267, 280, 335, 389
BspQI	GCTCTTC	1 cut(s)	1339
BspT107I	GGYRCC	3 cut(s)	162, 844, 965
BspTNI	GGTCTC	2 cut(s)	233, 251
BsrFI	RCCGGY	3 cut(s)	242, 308, 1003
BsrI	ACTGG	2 cut(s)	219, 1063
BssAI	RCCGGY	3 cut(s)	242, 308, 1003
BssECI	CCNNGG	4 cut(s)	109, 118, 166, 915
BssMI	GATC	8 cut(s)	4, 23, 205, 272, 327, 394, 433, 1291
BssNI	GRCGYC	1 cut(s)	163
Bst2UI	CCWGG	2 cut(s)	9, 110
Bst4CI	ACNGT	3 cut(s)	932, 1054, 1361
Bst6I	CTCTTC	2 cut(s)	412, 1339
BstACI	GRCGYC	1 cut(s)	163
BstAPI	GCANNNNNTGC	1 cut(s)	342
BstBAI	YACGTR	1 cut(s)	295
BstC8I	GCNNGC	4 cut(s)	122, 696, 723, 1028
BstDEI	CTNAG	4 cut(s)	134, 633, 663, 1022
BstDSI	CCRYGG	2 cut(s)	118, 166
BstF5I	GGATG	6 cut(s)	526, 559, 1102, 1224, 1360, 1438
BstFNI	CGCG	1 cut(s)	120
BstH2I	RGCGCY	2 cut(s)	166, 671
BstHHI	GCGC	5 cut(s)	165, 347, 670, 757, 859
BstKTI	GATC	8 cut(s)	7, 26, 208, 275, 330, 397, 436, 1294
BstMAI	GTCTC	5 cut(s)	58, 233, 251, 806, 930
BstMBI	GATC	8 cut(s)	4, 23, 205, 272, 327, 394, 433, 1291
BstMCI	CGRYCG	1 cut(s)	172
BstMWI	GCNNNNNNNGC	7 cut(s)	155, 225, 342, 351, 643, 754, 1338
BstNI	CCWGG	2 cut(s)	9, 110
BstNSI	RCATGY	2 cut(s)	71, 1074
BstSCI	CCNGG	4 cut(s)	7, 90, 108, 472
BstSFI	CTRYAG	2 cut(s)	534, 726
BstSLI	GKGCMC	2 cut(s)	849, 1390
BstUI	CGCG	1 cut(s)	120
BstV1I	GCAGC	4 cut(s)	324, 658, 712, 740
BstV2I	GAAGAC	1 cut(s)	79
BstX2I	RGATCY	3 cut(s)	4, 205, 272
BstYI	RGATCY	3 cut(s)	4, 205, 272
BstZI	CGGCCG	1 cut(s)	169
Bsu15I	ATCGAT	1 cut(s)	957
BsuI	GTATCC	2 cut(s)	913, 1164
BsuRI	GGCC	3 cut(s)	114, 171, 228
BsuTUI	ATCGAT	1 cut(s)	957
BtgI	CCRYGG	2 cut(s)	118, 166
BtsCI	GGATG	6 cut(s)	526, 559, 1102, 1224, 1360, 1438
BtsI	GCAGTG	2 cut(s)	131, 1219
BtsIMutI	CAGTG	4 cut(s)	131, 937, 1050, 1219
BveI	ACCTGC	1 cut(s)	918
Cac8I	GCNNGC	4 cut(s)	122, 696, 723, 1028
CfoI	GCGC	5 cut(s)	165, 347, 670, 757, 859
Cfr10I	RCCGGY	3 cut(s)	242, 308, 1003
Cfr13I	GGNCC	4 cut(s)	11, 112, 948, 1060
Cfr42I	CCGCGG	1 cut(s)	121
ClaI	ATCGAT	1 cut(s)	957
CseI	GACGC	1 cut(s)	164
Csp6I	GTAC	1 cut(s)	541
CspAI	ACCGGT	1 cut(s)	242
CviAII	CATG	7 cut(s)	68, 709, 832, 874, 1071, 1160, 1243
CviQI	GTAC	1 cut(s)	541
DdeI	CTNAG	4 cut(s)	134, 633, 663, 1022
DinI	GGCGCC	1 cut(s)	164
DpnI	GATC	8 cut(s)	6, 25, 207, 274, 329, 396, 435, 1293
DpnII	GATC	8 cut(s)	4, 23, 205, 272, 327, 394, 433, 1291
DraIII	CACNNNGTG	1 cut(s)	137
DrdI	GACNNNNNNGTC	1 cut(s)	374
DseDI	GACNNNNNNGTC	1 cut(s)	374
EaeI	YGGCCR	2 cut(s)	169, 226
EagI	CGGCCG	1 cut(s)	169
Eam1104I	CTCTTC	2 cut(s)	412, 1339
EarI	CTCTTC	2 cut(s)	412, 1339
Ecl136II	GAGCTC	1 cut(s)	528
EclXI	CGGCCG	1 cut(s)	169
Eco24I	GRGCYC	1 cut(s)	530
Eco31I	GGTCTC	2 cut(s)	233, 251
Eco32I	GATATC	1 cut(s)	714
Eco47I	GGWCC	3 cut(s)	11, 948, 1060
Eco52I	CGGCCG	1 cut(s)	169
Eco53kI	GAGCTC	1 cut(s)	528
Eco57I	CTGAAG	1 cut(s)	1392
EcoICRI	GAGCTC	1 cut(s)	528
EcoRII	CCWGG	2 cut(s)	7, 108
EcoRV	GATATC	1 cut(s)	714
EcoT38I	GRGCYC	1 cut(s)	530
EgeI	GGCGCC	1 cut(s)	164
EheI	GGCGCC	1 cut(s)	164
Esp3I	CGTCTC	1 cut(s)	806
FaeI	CATG	7 cut(s)	71, 712, 835, 877, 1074, 1163, 1246
FaqI	GGGAC	1 cut(s)	961
FatI	CATG	7 cut(s)	67, 708, 831, 873, 1070, 1159, 1242
FauI	CCCGC	1 cut(s)	113
FbaI	TGATCA	1 cut(s)	433
FblI	GTMKAC	2 cut(s)	303, 906
Fnu4HI	GCNGC	7 cut(s)	115, 118, 220, 313, 647, 726, 729
FokI	GGATG	5 cut(s)	533, 566, 1109, 1231, 1367
FriOI	GRGCYC	1 cut(s)	530
Fsp4HI	GCNGC	7 cut(s)	115, 118, 220, 313, 647, 726, 729
FspAI	RTGCGCAY	1 cut(s)	858
FspBI	CTAG	2 cut(s)	650, 1438
FspI	TGCGCA	2 cut(s)	756, 858
GlaI	GCGC	5 cut(s)	164, 346, 669, 756, 858
GluI	GCNGC	7 cut(s)	115, 118, 220, 313, 647, 726, 729
GsaI	CCCAGC	2 cut(s)	721, 735
HaeII	RGCGCY	2 cut(s)	166, 671
HaeIII	GGCC	3 cut(s)	114, 171, 228
HapII	CCGG	9 cut(s)	75, 92, 172, 243, 309, 473, 485, 1004, 1109
HgaI	GACGC	1 cut(s)	164
HhaI	GCGC	5 cut(s)	165, 347, 670, 757, 859
Hin1I	GRCGYC	1 cut(s)	163
Hin1II	CATG	7 cut(s)	71, 712, 835, 877, 1074, 1163, 1246
Hin6I	GCGC	5 cut(s)	163, 345, 668, 755, 857
HinP1I	GCGC	5 cut(s)	163, 345, 668, 755, 857
HincII	GTYRAC	1 cut(s)	304
HindII	GTYRAC	1 cut(s)	304
HpaII	CCGG	9 cut(s)	75, 92, 172, 243, 309, 473, 485, 1004, 1109
HphI	GGTGA	4 cut(s)	106, 751, 1018, 1126
Hpy166II	GTNNAC	5 cut(s)	304, 482, 907, 1068, 1388
Hpy188I	TCNGA	7 cut(s)	238, 266, 272, 591, 664, 919, 1087
Hpy188III	TCNNGA	5 cut(s)	21, 209, 437, 1270, 1295
Hpy8I	GTNNAC	5 cut(s)	304, 482, 907, 1068, 1388
Hpy99I	CGWCG	2 cut(s)	158, 283
HpyAV	CCTTC	5 cut(s)	243, 277, 544, 730, 938
HpyCH4III	ACNGT	3 cut(s)	932, 1054, 1361
HpyCH4IV	ACGT	1 cut(s)	294
HpyCH4V	TGCA	7 cut(s)	298, 336, 447, 536, 728, 1048, 1388
HpyF10VI	GCNNNNNNNGC	7 cut(s)	155, 225, 342, 351, 643, 754, 1338
HpyF3I	CTNAG	4 cut(s)	134, 633, 663, 1022
HpySE526I	ACGT	1 cut(s)	294
Hsp92I	GRCGYC	1 cut(s)	163
Hsp92II	CATG	7 cut(s)	71, 712, 835, 877, 1074, 1163, 1246
HspAI	GCGC	5 cut(s)	163, 345, 668, 755, 857
KasI	GGCGCC	1 cut(s)	162
Ksp22I	TGATCA	1 cut(s)	433
KspI	CCGCGG	1 cut(s)	121
Kzo9I	GATC	8 cut(s)	4, 23, 205, 272, 327, 394, 433, 1291
LguI	GCTCTTC	1 cut(s)	1339
LmnI	GCTCC	4 cut(s)	525, 609, 629, 1244
Lsp1109I	GCAGC	4 cut(s)	324, 658, 712, 740
LweI	GCATC	1 cut(s)	1350
MaeI	CTAG	2 cut(s)	650, 1438
MaeII	ACGT	1 cut(s)	294
MaeIII	GTNAC	2 cut(s)	98, 129
MalI	GATC	8 cut(s)	6, 25, 207, 274, 329, 396, 435, 1293
MboI	GATC	8 cut(s)	4, 23, 205, 272, 327, 394, 433, 1291
MboII	GAAGA	7 cut(s)	35, 79, 399, 754, 974, 1326, 1392
MfeI	CAATTG	5 cut(s)	331, 349, 795, 1175, 1327
MflI	RGATCY	3 cut(s)	4, 205, 272
MhlI	GDGCHC	4 cut(s)	530, 849, 1269, 1390
MluCI	AATT	6 cut(s)	331, 349, 795, 818, 1175, 1327
Mly113I	GGCGCC	1 cut(s)	163
MlyI	GAGTC	6 cut(s)	106, 384, 398, 592, 829, 1240
MnlI	CCTC	7 cut(s)	188, 658, 871, 880, 925, 1051, 1344
MseI	TTAA	2 cut(s)	143, 1418
MslI	CAYNNNNRTG	2 cut(s)	864, 1346
MspA1I	CMGCKG	4 cut(s)	120, 200, 721, 731
MspI	CCGG	9 cut(s)	75, 92, 172, 243, 309, 473, 485, 1004, 1109
MspR9I	CCNGG	4 cut(s)	9, 92, 110, 474
MunI	CAATTG	5 cut(s)	331, 349, 795, 1175, 1327
MvaI	CCWGG	2 cut(s)	9, 110
MvnI	CGCG	1 cut(s)	120
MwoI	GCNNNNNNNGC	7 cut(s)	155, 225, 342, 351, 643, 754, 1338
NarI	GGCGCC	1 cut(s)	163
NciI	CCSGG	2 cut(s)	92, 474
NdeII	GATC	8 cut(s)	4, 23, 205, 272, 327, 394, 433, 1291
NlaIII	CATG	7 cut(s)	71, 712, 835, 877, 1074, 1163, 1246
NlaIV	GGNNCC	7 cut(s)	6, 164, 176, 274, 846, 949, 967
NmeAIII	GCCGAG	1 cut(s)	139
NmuCI	GTSAC	2 cut(s)	98, 129
NsbI	TGCGCA	2 cut(s)	756, 858
NspI	RCATGY	2 cut(s)	71, 1074
PciI	ACATGT	2 cut(s)	67, 1070
PciSI	GCTCTTC	1 cut(s)	1339
PcsI	WCGNNNNNNNCGW	1 cut(s)	300
PfeI	GAWTC	4 cut(s)	61, 267, 679, 1300
PflMI	CCANNNNNTGG	1 cut(s)	1314
PfoI	TCCNGGA	1 cut(s)	7
PinAI	ACCGGT	1 cut(s)	242
PkrI	GCNGC	7 cut(s)	116, 119, 221, 314, 648, 727, 730
PleI	GAGTC	6 cut(s)	105, 383, 398, 591, 829, 1240
PluTI	GGCGCC	1 cut(s)	166
PpsI	GAGTC	6 cut(s)	105, 383, 398, 591, 829, 1240
Ppu21I	YACGTR	1 cut(s)	295
PscI	ACATGT	2 cut(s)	67, 1070
PshBI	ATTAAT	1 cut(s)	1418
Psp124BI	GAGCTC	1 cut(s)	530
Psp6I	CCWGG	2 cut(s)	7, 108
PspFI	CCCAGC	2 cut(s)	717, 731
PspGI	CCWGG	2 cut(s)	7, 108
PspN4I	GGNNCC	7 cut(s)	6, 164, 176, 274, 846, 949, 967
PspPI	GGNCC	4 cut(s)	11, 112, 948, 1060
PstI	CTGCAG	2 cut(s)	538, 730
PsuI	RGATCY	3 cut(s)	4, 205, 272
PvuII	CAGCTG	3 cut(s)	200, 721, 731
RsaI	GTAC	1 cut(s)	542
RsaNI	GTAC	1 cut(s)	541
RseI	CAYNNNNRTG	2 cut(s)	864, 1346
SacI	GAGCTC	1 cut(s)	530
SacII	CCGCGG	1 cut(s)	121
SalI	GTCGAC	1 cut(s)	302
SapI	GCTCTTC	1 cut(s)	1339
SaqAI	TTAA	2 cut(s)	143, 1418
SatI	GCNGC	7 cut(s)	115, 118, 220, 313, 647, 726, 729
Sau3AI	GATC	8 cut(s)	4, 23, 205, 272, 327, 394, 433, 1291
Sau96I	GGNCC	4 cut(s)	11, 112, 948, 1060
SchI	GAGTC	6 cut(s)	106, 384, 398, 592, 829, 1240
ScrFI	CCNGG	4 cut(s)	9, 92, 110, 474
SduI	GDGCHC	4 cut(s)	530, 849, 1269, 1390
SfaNI	GCATC	1 cut(s)	1350
SfcI	CTRYAG	2 cut(s)	534, 726
SfoI	GGCGCC	1 cut(s)	164
Sfr303I	CCGCGG	1 cut(s)	121
SgrBI	CCGCGG	1 cut(s)	121
SinI	GGWCC	3 cut(s)	11, 948, 1060
SmiMI	CAYNNNNRTG	2 cut(s)	864, 1346
SmlI	CTYRAG	1 cut(s)	1295
SmoI	CTYRAG	1 cut(s)	1295
Sse9I	AATT	6 cut(s)	331, 349, 795, 818, 1175, 1327
SsiI	CCGC	4 cut(s)	115, 118, 120, 219
SspDI	GGCGCC	1 cut(s)	162
SspI	AATATT	1 cut(s)	1396
SspMI	CTAG	2 cut(s)	650, 1438
SstI	GAGCTC	1 cut(s)	530
StyD4I	CCNGG	4 cut(s)	7, 90, 108, 472
TaaI	ACNGT	3 cut(s)	932, 1054, 1361
TaiI	ACGT	1 cut(s)	297
TaqI	TCGA	5 cut(s)	281, 303, 530, 957, 1271
TasI	AATT	6 cut(s)	331, 349, 795, 818, 1175, 1327
TauI	GCSGC	3 cut(s)	117, 120, 222
TfiI	GAWTC	4 cut(s)	61, 267, 679, 1300
Tru1I	TTAA	2 cut(s)	143, 1418
Tru9I	TTAA	2 cut(s)	143, 1418
TscAI	CASTG	4 cut(s)	131, 937, 1057, 1219
TseFI	GTSAC	2 cut(s)	98, 129
TseI	GCWGC	4 cut(s)	312, 646, 725, 728
Tsp45I	GTSAC	2 cut(s)	98, 129
TspDTI	ATGAA	2 cut(s)	1025, 1235
TspRI	CASTG	4 cut(s)	131, 937, 1057, 1219
Van91I	CCANNNNNTGG	1 cut(s)	1314
VneI	GTGCAC	1 cut(s)	1386
VpaK11BI	GGWCC	3 cut(s)	11, 948, 1060
VspI	ATTAAT	1 cut(s)	1418
XceI	RCATGY	2 cut(s)	71, 1074
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1249
XmiI	GTMKAC	2 cut(s)	303, 906
XspI	CTAG	2 cut(s)	650, 1438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.