HpcH/HpaI aldolase/citrate lyase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G10750 |
| fragaria_vesca | FvH4_5g11021 FvH4_5g11021 |
| malus_domestica | MD06G1117400.v1.1 |
| prunus_persica | Prupe.5G128500_v2.0.a1 |
| pyrus_communis | pycom06g10930 |
| rosa_chinensis | RchiOBHm_Chr7g0186781 |
| rosa_laevigata | RLG00000004816 |
| rosa_multiflora | Rmu_co8215596.1_g000001 Rmu_sc0009734.1_g000001 Rmu_sc0040245.1_g000001 Rmu_ssc0000024.1_g000045 |
| rosa_roxburghii | Rroxscaffold_3G00267830 |
| rosa_rugosa | Rorug06G0476600 |
| rosa_samantha | Rh7AG063900 Rh7BG080400 Rh7CG083600 Rh7DG084500 |
| rosa_wichuraiana | Rw7G007250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3074 |
| Acc36I | ACCTGC | 1 cut(s) | 1204 |
| Acc65I | GGTACC | 1 cut(s) | 2908 |
| AccB1I | GGYRCC | 2 cut(s) | 2571, 2908 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1654, 2014, 2735 |
| AccBSI | CCGCTC | 1 cut(s) | 52 |
| AccI | GTMKAC | 4 cut(s) | 156, 1305, 2292, 2840 |
| AciI | CCGC | 6 cut(s) | 50, 489, 1817, 1825, 2644, 2706 |
| AclWI | GGATC | 8 cut(s) | 440, 453, 571, 628, 1112, 1204, 1266, 1761 |
| AcoI | YGGCCR | 6 cut(s) | 33, 47, 600, 2274, 2379, 2860 |
| AcsI | RAATTY | 4 cut(s) | 525, 1839, 2297, 2687 |
| AcuI | CTGAAG | 4 cut(s) | 1160, 1508, 2055, 2303 |
| AdeI | CACNNNGTG | 1 cut(s) | 908 |
| AfaI | GTAC | 9 cut(s) | 120, 166, 432, 586, 646, 2250, 2910, 3003, 3093 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 56, 273, 1369, 1654, 2014, 2172, 2327, 2581, 2735 |
| AflIII | ACRYGT | 1 cut(s) | 605 |
| AgeI | ACCGGT | 1 cut(s) | 266 |
| AjnI | CCWGG | 2 cut(s) | 103, 1776 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 924, 956 |
| Alw21I | GWGCWC | 3 cut(s) | 904, 1084, 1470 |
| Alw26I | GTCTC | 4 cut(s) | 54, 429, 746, 3028 |
| Alw44I | GTGCAC | 1 cut(s) | 900 |
| AlwI | GGATC | 8 cut(s) | 440, 453, 571, 628, 1112, 1204, 1266, 1761 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 830, 1702, 1750 |
| Ama87I | CYCGRG | 2 cut(s) | 1923, 3087 |
| AoxI | GGCC | 8 cut(s) | 33, 47, 600, 1360, 2274, 2311, 2379, 2860 |
| ApaLI | GTGCAC | 1 cut(s) | 900 |
| ApoI | RAATTY | 4 cut(s) | 525, 1839, 2297, 2687 |
| AseI | ATTAAT | 1 cut(s) | 1038 |
| AsiGI | ACCGGT | 1 cut(s) | 266 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 855, 933, 2389 |
| Asp718I | GGTACC | 1 cut(s) | 2908 |
| AspLEI | GCGC | 4 cut(s) | 776, 1149, 2007, 2511 |
| AspS9I | GGNCC | 5 cut(s) | 1645, 2017, 2130, 2311, 2795 |
| AsuC2I | CCSGG | 1 cut(s) | 507 |
| AsuHPI | GGTGA | 8 cut(s) | 679, 920, 1421, 1436, 1670, 2215, 2355, 2981 |
| AvaI | CYCGRG | 2 cut(s) | 1923, 3087 |
| AvaII | GGWCC | 4 cut(s) | 1645, 2017, 2130, 2795 |
| AxyI | CCTNAGG | 1 cut(s) | 114 |
| BaeGI | GKGCMC | 3 cut(s) | 296, 904, 1186 |
| BalI | TGGCCA | 3 cut(s) | 602, 2276, 2381 |
| BamHI | GGATCC | 1 cut(s) | 445 |
| BanI | GGYRCC | 2 cut(s) | 2571, 2908 |
| BauI | CACGAG | 1 cut(s) | 2097 |
| BbsI | GAAGAC | 2 cut(s) | 866, 1514 |
| Bbv12I | GWGCWC | 3 cut(s) | 904, 1084, 1470 |
| BbvCI | CCTCAGC | 1 cut(s) | 1044 |
| BceAI | ACGGC | 2 cut(s) | 20, 175 |
| BciT130I | CCWGG | 2 cut(s) | 105, 1778 |
| BclI | TGATCA | 2 cut(s) | 148, 2743 |
| BcnI | CCSGG | 1 cut(s) | 507 |
| BcoDI | GTCTC | 4 cut(s) | 54, 429, 746, 3028 |
| BfaI | CTAG | 3 cut(s) | 1335, 1680, 2999 |
| BfmI | CTRYAG | 5 cut(s) | 71, 96, 636, 1940, 1988 |
| BfoI | RGCGCY | 1 cut(s) | 2008 |
| BfuAI | ACCTGC | 1 cut(s) | 1204 |
| BglII | AGATCT | 1 cut(s) | 793 |
| BmcAI | AGTACT | 1 cut(s) | 166 |
| Bme1390I | CCNGG | 3 cut(s) | 105, 507, 1778 |
| Bme18I | GGWCC | 4 cut(s) | 1645, 2017, 2130, 2795 |
| BmeT110I | CYCGRG | 2 cut(s) | 1923, 3087 |
| BmgT120I | GGNCC | 5 cut(s) | 1645, 2017, 2130, 2311, 2795 |
| BmiI | GGNNCC | 8 cut(s) | 447, 1646, 2131, 2501, 2573, 2797, 2910, 2984 |
| BmrFI | CCNGG | 3 cut(s) | 105, 507, 1778 |
| BmrI | ACTGGG | 1 cut(s) | 444 |
| BmuI | ACTGGG | 1 cut(s) | 444 |
| BpiI | GAAGAC | 2 cut(s) | 866, 1514 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1044 |
| BpuEI | CTTGAG | 6 cut(s) | 318, 1205, 1311, 1562, 1757, 2417 |
| BpuMI | CCSGG | 1 cut(s) | 507 |
| BsaAI | YACGTR | 1 cut(s) | 2252 |
| BsaI | GGTCTC | 1 cut(s) | 746 |
| BsaWI | WCCGGW | 1 cut(s) | 266 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 157, 187, 377, 407 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 56, 273, 1369, 1654, 2014, 2172, 2327, 2581, 2735 |
| Bse118I | RCCGGY | 1 cut(s) | 266 |
| Bse1I | ACTGG | 5 cut(s) | 172, 301, 325, 450, 2992 |
| Bse21I | CCTNAGG | 1 cut(s) | 114 |
| Bse3DI | GCAATG | 4 cut(s) | 192, 2052, 2442, 2850 |
| BseBI | CCWGG | 2 cut(s) | 105, 1778 |
| BseGI | GGATG | 2 cut(s) | 42, 83 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 56, 273, 1369, 1654, 2014, 2172, 2327, 2581, 2735 |
| BseMI | GCAATG | 4 cut(s) | 192, 2052, 2442, 2850 |
| BseMII | CTCAG | 6 cut(s) | 128, 449, 798, 1035, 2121, 3054 |
| BseNI | ACTGG | 5 cut(s) | 172, 301, 325, 450, 2992 |
| BseRI | GAGGAG | 2 cut(s) | 1206, 2995 |
| BseSI | GKGCMC | 3 cut(s) | 296, 904, 1186 |
| BseX3I | CGGCCG | 1 cut(s) | 47 |
| BseYI | CCCAGC | 2 cut(s) | 721, 800 |
| BsgI | GTGCAG | 2 cut(s) | 1652, 2805 |
| Bsh1285I | CGRYCG | 1 cut(s) | 50 |
| BshFI | GGCC | 8 cut(s) | 35, 49, 602, 1362, 2276, 2313, 2381, 2862 |
| BshNI | GGYRCC | 2 cut(s) | 2571, 2908 |
| BshTI | ACCGGT | 1 cut(s) | 266 |
| BsiEI | CGRYCG | 1 cut(s) | 50 |
| BsiHKAI | GWGCWC | 3 cut(s) | 904, 1084, 1470 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1923, 3087 |
| BsiSI | CCGG | 5 cut(s) | 46, 267, 507, 732, 1906 |
| BslFI | GGGAC | 7 cut(s) | 86, 142, 1323, 1658, 2152, 2781, 2788 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 56, 273, 1369, 1654, 2014, 2172, 2327, 2581, 2735 |
| BsmAI | GTCTC | 4 cut(s) | 54, 429, 746, 3028 |
| BsmBI | CGTCTC | 1 cut(s) | 54 |
| BsmFI | GGGAC | 7 cut(s) | 86, 142, 1323, 1658, 2152, 2781, 2788 |
| BsnI | GGCC | 8 cut(s) | 35, 49, 602, 1362, 2276, 2313, 2381, 2862 |
| Bso31I | GGTCTC | 1 cut(s) | 746 |
| BsoBI | CYCGRG | 2 cut(s) | 1923, 3087 |
| Bsp1286I | GDGCHC | 5 cut(s) | 296, 904, 1084, 1186, 1470 |
| Bsp19I | CCATGG | 2 cut(s) | 1488, 2119 |
| BspACI | CCGC | 6 cut(s) | 50, 489, 1817, 1825, 2644, 2706 |
| BspANI | GGCC | 8 cut(s) | 35, 49, 602, 1362, 2276, 2313, 2381, 2862 |
| BspCNI | CTCAG | 6 cut(s) | 127, 450, 799, 1036, 2120, 3053 |
| BspHI | TCATGA | 4 cut(s) | 339, 1276, 2185, 2224 |
| BspLI | GGNNCC | 8 cut(s) | 447, 1646, 2131, 2501, 2573, 2797, 2910, 2984 |
| BspMAI | CTGCAG | 3 cut(s) | 75, 1944, 1992 |
| BspMI | ACCTGC | 1 cut(s) | 1204 |
| BspPI | GGATC | 8 cut(s) | 440, 453, 571, 628, 1112, 1204, 1266, 1761 |
| BspQI | GCTCTTC | 1 cut(s) | 2457 |
| BspT107I | GGYRCC | 2 cut(s) | 2571, 2908 |
| BspTNI | GGTCTC | 1 cut(s) | 746 |
| BsrBI | CCGCTC | 1 cut(s) | 52 |
| BsrDI | GCAATG | 4 cut(s) | 192, 2052, 2442, 2850 |
| BsrFI | RCCGGY | 1 cut(s) | 266 |
| BsrI | ACTGG | 5 cut(s) | 172, 301, 325, 450, 2992 |
| BssAI | RCCGGY | 1 cut(s) | 266 |
| BssNAI | GTATAC | 1 cut(s) | 2841 |
| BssSI | CACGAG | 1 cut(s) | 2097 |
| BssT1I | CCWWGG | 4 cut(s) | 229, 1488, 2119, 3029 |
| Bst1107I | GTATAC | 1 cut(s) | 2841 |
| Bst2BI | CACGAG | 1 cut(s) | 2097 |
| Bst2UI | CCWGG | 2 cut(s) | 105, 1778 |
| Bst6I | CTCTTC | 5 cut(s) | 189, 2031, 2262, 2457, 2972 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1079, 1987, 2852 |
| BstBAI | YACGTR | 1 cut(s) | 2252 |
| BstC8I | GCNNGC | 9 cut(s) | 486, 813, 1018, 1170, 1992, 2475, 2737, 2820, 2848 |
| BstDEI | CTNAG | 8 cut(s) | 114, 458, 807, 1044, 1379, 2107, 2315, 3040 |
| BstDSI | CCRYGG | 5 cut(s) | 9, 1186, 1488, 2119, 2488 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2325 |
| BstF5I | GGATG | 2 cut(s) | 42, 83 |
| BstH2I | RGCGCY | 1 cut(s) | 2008 |
| BstHHI | GCGC | 4 cut(s) | 776, 1149, 2007, 2511 |
| BstMAI | GTCTC | 4 cut(s) | 54, 429, 746, 3028 |
| BstMCI | CGRYCG | 1 cut(s) | 50 |
| BstNI | CCWGG | 2 cut(s) | 105, 1778 |
| BstNSI | RCATGY | 6 cut(s) | 401, 488, 609, 680, 729, 2407 |
| BstSCI | CCNGG | 3 cut(s) | 103, 505, 1776 |
| BstSFI | CTRYAG | 5 cut(s) | 71, 96, 636, 1940, 1988 |
| BstSLI | GKGCMC | 3 cut(s) | 296, 904, 1186 |
| BstV2I | GAAGAC | 2 cut(s) | 866, 1514 |
| BstX2I | RGATCY | 7 cut(s) | 445, 563, 793, 1117, 1196, 1258, 1753 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2126 |
| BstYI | RGATCY | 7 cut(s) | 445, 563, 793, 1117, 1196, 1258, 1753 |
| BstZ17I | GTATAC | 1 cut(s) | 2841 |
| BstZI | CGGCCG | 1 cut(s) | 47 |
| Bsu36I | CCTNAGG | 1 cut(s) | 114 |
| BsuRI | GGCC | 8 cut(s) | 35, 49, 602, 1362, 2276, 2313, 2381, 2862 |
| BtgI | CCRYGG | 5 cut(s) | 9, 1186, 1488, 2119, 2488 |
| BtsCI | GGATG | 2 cut(s) | 42, 83 |
| BtsI | GCAGTG | 1 cut(s) | 1916 |
| BtsIMutI | CAGTG | 9 cut(s) | 93, 294, 623, 904, 1916, 2765, 2999, 3064, 3098 |
| BveI | ACCTGC | 1 cut(s) | 1204 |
| Cac8I | GCNNGC | 9 cut(s) | 486, 813, 1018, 1170, 1992, 2475, 2737, 2820, 2848 |
| CaiI | CAGNNNCTG | 3 cut(s) | 830, 1702, 1750 |
| CciI | TCATGA | 4 cut(s) | 339, 1276, 2185, 2224 |
| CfoI | GCGC | 4 cut(s) | 776, 1149, 2007, 2511 |
| Cfr10I | RCCGGY | 1 cut(s) | 266 |
| Cfr13I | GGNCC | 5 cut(s) | 1645, 2017, 2130, 2311, 2795 |
| CseI | GACGC | 1 cut(s) | 79 |
| Csp6I | GTAC | 9 cut(s) | 119, 165, 431, 585, 645, 2249, 2909, 3002, 3092 |
| CspAI | ACCGGT | 1 cut(s) | 266 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 592, 627 |
| CviQI | GTAC | 9 cut(s) | 119, 165, 431, 585, 645, 2249, 2909, 3002, 3092 |
| DdeI | CTNAG | 8 cut(s) | 114, 458, 807, 1044, 1379, 2107, 2315, 3040 |
| DraI | TTTAAA | 1 cut(s) | 1998 |
| DraIII | CACNNNGTG | 1 cut(s) | 908 |
| EaeI | YGGCCR | 6 cut(s) | 33, 47, 600, 2274, 2379, 2860 |
| EagI | CGGCCG | 1 cut(s) | 47 |
| Eam1104I | CTCTTC | 5 cut(s) | 189, 2031, 2262, 2457, 2972 |
| EarI | CTCTTC | 5 cut(s) | 189, 2031, 2262, 2457, 2972 |
| EclXI | CGGCCG | 1 cut(s) | 47 |
| Eco130I | CCWWGG | 4 cut(s) | 229, 1488, 2119, 3029 |
| Eco31I | GGTCTC | 1 cut(s) | 746 |
| Eco47I | GGWCC | 4 cut(s) | 1645, 2017, 2130, 2795 |
| Eco52I | CGGCCG | 1 cut(s) | 47 |
| Eco57I | CTGAAG | 4 cut(s) | 1160, 1508, 2055, 2303 |
| Eco81I | CCTNAGG | 1 cut(s) | 114 |
| Eco88I | CYCGRG | 2 cut(s) | 1923, 3087 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2325 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2311 |
| EcoRII | CCWGG | 2 cut(s) | 103, 1776 |
| EcoT14I | CCWWGG | 4 cut(s) | 229, 1488, 2119, 3029 |
| EcoT22I | ATGCAT | 1 cut(s) | 711 |
| ErhI | CCWWGG | 4 cut(s) | 229, 1488, 2119, 3029 |
| Esp3I | CGTCTC | 1 cut(s) | 54 |
| FaqI | GGGAC | 7 cut(s) | 86, 142, 1323, 1658, 2152, 2781, 2788 |
| FbaI | TGATCA | 2 cut(s) | 148, 2743 |
| FblI | GTMKAC | 4 cut(s) | 156, 1305, 2292, 2840 |
| FokI | GGATG | 2 cut(s) | 29, 90 |
| FspBI | CTAG | 3 cut(s) | 1335, 1680, 2999 |
| GlaI | GCGC | 4 cut(s) | 775, 1148, 2006, 2510 |
| GsaI | CCCAGC | 2 cut(s) | 725, 804 |
| HaeII | RGCGCY | 1 cut(s) | 2008 |
| HaeIII | GGCC | 8 cut(s) | 35, 49, 602, 1362, 2276, 2313, 2381, 2862 |
| HapII | CCGG | 5 cut(s) | 46, 267, 507, 732, 1906 |
| HgaI | GACGC | 1 cut(s) | 79 |
| HhaI | GCGC | 4 cut(s) | 776, 1149, 2007, 2511 |
| Hin6I | GCGC | 4 cut(s) | 774, 1147, 2005, 2509 |
| HinP1I | GCGC | 4 cut(s) | 774, 1147, 2005, 2509 |
| HincII | GTYRAC | 1 cut(s) | 1111 |
| HindII | GTYRAC | 1 cut(s) | 1111 |
| HpaII | CCGG | 5 cut(s) | 46, 267, 507, 732, 1906 |
| HphI | GGTGA | 8 cut(s) | 679, 920, 1421, 1436, 1670, 2215, 2355, 2981 |
| Hpy99I | CGWCG | 1 cut(s) | 59 |
| HpyAV | CCTTC | 9 cut(s) | 464, 845, 923, 1484, 1550, 1924, 2030, 2581, 2671 |
| HpyCH4IV | ACGT | 3 cut(s) | 1519, 2251, 2494 |
| HpyF3I | CTNAG | 8 cut(s) | 114, 458, 807, 1044, 1379, 2107, 2315, 3040 |
| HpySE526I | ACGT | 3 cut(s) | 1519, 2251, 2494 |
| HspAI | GCGC | 4 cut(s) | 774, 1147, 2005, 2509 |
| KpnI | GGTACC | 1 cut(s) | 2912 |
| Ksp22I | TGATCA | 2 cut(s) | 148, 2743 |
| LguI | GCTCTTC | 1 cut(s) | 2457 |
| LmnI | GCTCC | 2 cut(s) | 1465, 2982 |
| MaeI | CTAG | 3 cut(s) | 1335, 1680, 2999 |
| MaeII | ACGT | 3 cut(s) | 1519, 2251, 2494 |
| MaeIII | GTNAC | 6 cut(s) | 91, 992, 1944, 2099, 2361, 2895 |
| MbiI | CCGCTC | 1 cut(s) | 52 |
| MfeI | CAATTG | 2 cut(s) | 1868, 2504 |
| MflI | RGATCY | 7 cut(s) | 445, 563, 793, 1117, 1196, 1258, 1753 |
| MhlI | GDGCHC | 5 cut(s) | 296, 904, 1084, 1186, 1470 |
| MlsI | TGGCCA | 3 cut(s) | 602, 2276, 2381 |
| MluNI | TGGCCA | 3 cut(s) | 602, 2276, 2381 |
| MlyI | GAGTC | 3 cut(s) | 974, 1544, 3030 |
| MmeI | TCCRAC | 3 cut(s) | 37, 1518, 2477 |
| Mox20I | TGGCCA | 3 cut(s) | 602, 2276, 2381 |
| Mph1103I | ATGCAT | 1 cut(s) | 711 |
| MroXI | GAANNNNTTC | 3 cut(s) | 855, 933, 2389 |
| MscI | TGGCCA | 3 cut(s) | 602, 2276, 2381 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2124, 2229, 3060 |
| Msp20I | TGGCCA | 3 cut(s) | 602, 2276, 2381 |
| MspA1I | CMGCKG | 1 cut(s) | 2711 |
| MspI | CCGG | 5 cut(s) | 46, 267, 507, 732, 1906 |
| MspR9I | CCNGG | 3 cut(s) | 105, 507, 1778 |
| MunI | CAATTG | 2 cut(s) | 1868, 2504 |
| MvaI | CCWGG | 2 cut(s) | 105, 1778 |
| NciI | CCSGG | 1 cut(s) | 507 |
| NcoI | CCATGG | 2 cut(s) | 1488, 2119 |
| NlaIV | GGNNCC | 8 cut(s) | 447, 1646, 2131, 2501, 2573, 2797, 2910, 2984 |
| NmeAIII | GCCGAG | 4 cut(s) | 946, 1198, 1292, 2888 |
| NmuCI | GTSAC | 4 cut(s) | 91, 2099, 2361, 2895 |
| NsiI | ATGCAT | 1 cut(s) | 711 |
| NspI | RCATGY | 6 cut(s) | 401, 488, 609, 680, 729, 2407 |
| PaeI | GCATGC | 1 cut(s) | 488 |
| PaeR7I | CTCGAG | 1 cut(s) | 1923 |
| PagI | TCATGA | 4 cut(s) | 339, 1276, 2185, 2224 |
| PasI | CCCWGGG | 1 cut(s) | 104 |
| PciI | ACATGT | 1 cut(s) | 605 |
| PciSI | GCTCTTC | 1 cut(s) | 2457 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 60 |
| PdmI | GAANNNNTTC | 3 cut(s) | 855, 933, 2389 |
| PfeI | GAWTC | 7 cut(s) | 415, 533, 1388, 1427, 1747, 2552, 2873 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1654, 2014, 2735 |
| PinAI | ACCGGT | 1 cut(s) | 266 |
| PleI | GAGTC | 3 cut(s) | 974, 1543, 3030 |
| PpsI | GAGTC | 3 cut(s) | 974, 1543, 3030 |
| Ppu21I | YACGTR | 1 cut(s) | 2252 |
| PscI | ACATGT | 1 cut(s) | 605 |
| PshBI | ATTAAT | 1 cut(s) | 1038 |
| PsiI | TTATAA | 1 cut(s) | 3074 |
| Psp6I | CCWGG | 2 cut(s) | 103, 1776 |
| PspFI | CCCAGC | 2 cut(s) | 721, 800 |
| PspGI | CCWGG | 2 cut(s) | 103, 1776 |
| PspN4I | GGNNCC | 8 cut(s) | 447, 1646, 2131, 2501, 2573, 2797, 2910, 2984 |
| PspPI | GGNCC | 5 cut(s) | 1645, 2017, 2130, 2311, 2795 |
| PstI | CTGCAG | 3 cut(s) | 75, 1944, 1992 |
| PstNI | CAGNNNCTG | 3 cut(s) | 830, 1702, 1750 |
| PsuI | RGATCY | 7 cut(s) | 445, 563, 793, 1117, 1196, 1258, 1753 |
| PvuII | CAGCTG | 1 cut(s) | 2711 |
| RsaI | GTAC | 9 cut(s) | 120, 166, 432, 586, 646, 2250, 2910, 3003, 3093 |
| RsaNI | GTAC | 9 cut(s) | 119, 165, 431, 585, 645, 2249, 2909, 3002, 3092 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2124, 2229, 3060 |
| SapI | GCTCTTC | 1 cut(s) | 2457 |
| Sau96I | GGNCC | 5 cut(s) | 1645, 2017, 2130, 2311, 2795 |
| ScaI | AGTACT | 1 cut(s) | 166 |
| SchI | GAGTC | 3 cut(s) | 974, 1544, 3030 |
| ScrFI | CCNGG | 3 cut(s) | 105, 507, 1778 |
| SduI | GDGCHC | 5 cut(s) | 296, 904, 1084, 1186, 1470 |
| SfcI | CTRYAG | 5 cut(s) | 71, 96, 636, 1940, 1988 |
| Sfr274I | CTCGAG | 1 cut(s) | 1923 |
| SinI | GGWCC | 4 cut(s) | 1645, 2017, 2130, 2795 |
| SlaI | CTCGAG | 1 cut(s) | 1923 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2124, 2229, 3060 |
| SmlI | CTYRAG | 7 cut(s) | 333, 1220, 1326, 1577, 1736, 1923, 2396 |
| SmoI | CTYRAG | 7 cut(s) | 333, 1220, 1326, 1577, 1736, 1923, 2396 |
| SphI | GCATGC | 1 cut(s) | 488 |
| SsiI | CCGC | 6 cut(s) | 50, 489, 1817, 1825, 2644, 2706 |
| SspMI | CTAG | 3 cut(s) | 1335, 1680, 2999 |
| StyD4I | CCNGG | 3 cut(s) | 103, 505, 1776 |
| StyI | CCWWGG | 4 cut(s) | 229, 1488, 2119, 3029 |
| TaiI | ACGT | 3 cut(s) | 1522, 2254, 2497 |
| TaqI | TCGA | 7 cut(s) | 216, 529, 949, 1084, 1127, 1665, 1924 |
| TatI | WGTACW | 4 cut(s) | 164, 584, 644, 3001 |
| TauI | GCSGC | 6 cut(s) | 52, 491, 1820, 1828, 2647, 2708 |
| TfiI | GAWTC | 7 cut(s) | 415, 533, 1388, 1427, 1747, 2552, 2873 |
| TscAI | CASTG | 9 cut(s) | 100, 301, 630, 904, 1916, 2772, 2999, 3064, 3105 |
| TseFI | GTSAC | 4 cut(s) | 91, 2099, 2361, 2895 |
| Tsp45I | GTSAC | 4 cut(s) | 91, 2099, 2361, 2895 |
| TspGWI | ACGGA | 2 cut(s) | 398, 1963 |
| TspRI | CASTG | 9 cut(s) | 100, 301, 630, 904, 1916, 2772, 2999, 3064, 3105 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1654, 2014, 2735 |
| VneI | GTGCAC | 1 cut(s) | 900 |
| VpaK11BI | GGWCC | 4 cut(s) | 1645, 2017, 2130, 2795 |
| VspI | ATTAAT | 1 cut(s) | 1038 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2325 |
| XapI | RAATTY | 4 cut(s) | 525, 1839, 2297, 2687 |
| XceI | RCATGY | 6 cut(s) | 401, 488, 609, 680, 729, 2407 |
| XhoI | CTCGAG | 1 cut(s) | 1923 |
| XmiI | GTMKAC | 4 cut(s) | 156, 1305, 2292, 2840 |
| XmnI | GAANNNNTTC | 3 cut(s) | 855, 933, 2389 |
| XspI | CTAG | 3 cut(s) | 1335, 1680, 2999 |
| ZrmI | AGTACT | 1 cut(s) | 166 |
| Zsp2I | ATGCAT | 1 cut(s) | 711 |