Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0008995

Physical Location & Seq

Genomic Coordinates Forward (+)

1024211 .. 1027904

Gene Structure 3694 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0013100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGATGAATCTGGTGAATCGGAAACTGGTTTTCGCGGCGGTGGCGGTTTTCTCTCTCTCCGCCGTCACGATTTTCGCGCGGCCGTTTGTTCTGGTTCTCTCACCAGACGACCTCTTAAACGCCGCTAACCCGGCCGACGGCGGCGACTCTCCCGCCACCGATCCGACTCAGAATGACTCGGCCGACTGGGACGAGTTCGGCGACTCGGCGTATCCGCAATCCGAGGAGGAGCTCGACCCGGGCTCGTGGCGTCCCATCTTCGAACCCGACCCGTTCAAGCCCGACCTGTCCGCCCACCCGGACAAGGAGTACTACTCCACCGTGTCGAAATTGGTCGACTCCGTCAGCTCCGGCGACACGGCGCTCATGGAGGACGCGGTTTCCGAGATCGAGGCGTCCGCTGCCCGCGGTGTGCCTCACGCGCGGTCCGTGCTCGGGTTTCTGTTCGGCACGGGACAGATGAGGAAGCAGAACAAGGCCAAGGCGTTCACGTACCATTACTTCGCCGCGGACGGCGGCAATATGCAGTCGAAGATGGCTCTGGCTTATACTTACTTTAGGCAAGATATGTTTGAGAAAGCGGTGAAGCTGTACTCGGAATTAGCCGAGGCAGCTGTGAATAGCTTCTTGATTTCAAAGGACTCTCCGGTGATTGAGCCGGTGAGGATCCACAATGGAGCTGAAGAGAATAAGGAGGCATTGAGGAAAAGCCGAGGCGAAGAAGATGAGGACTTTCAGATTCTGGAGTATCAGGCTCAGAAGGGGAATTCTCTTGCAATGTATAAGATTGGCCTCTTTTACTATTTCGGGCTCAGAGGGTTGCGCCGTGACCACGCTAAGGCATTGTCGTGGTTTCTCAAGTCTGTGGAGAAGGGAGAGCCTAGGGCTATGGAGTTTCTTGGTGAGATTTATGCTAGAGGAGCTGGGGTTGAGAGGAATTACACTAAGGCTCTGGAGTGGCTTACATTAGCATCCAAACAAGAACTGTATTCGGCTTATAATGGGATGGGCTATTTGTACGTTAAAGGATATGGAGTGGAGAAGAAGAACTACACTAAGGCAAAAGAGTACTTTGAGAAGGCTGCTGAGAATCGAGATGCTGGCGGGCACTATAACTTGGGAGTACTTTATCTCAAAGGGATTGGGGTAAAAAGAGATGTGAAACTTGCATGCCAGTACTTTATAGTGGCTGCTAATCACGGTCAACCAAAGGCATTCTACCAGCTTGCAAAGATGTTTCATGCTGGAGTGGGGCTTAAGAAAAATCTTCCCAGGGCTACTGTGTTGTACAAACTAGTTGCTGAAAGGGGGCCATGGAGTTCCTTGTCCAGATGGGCACTGGAGTCATACTTAAAGGGGGATGTGGGGAAGGCATTTTTCTTATACTCAAGGATGGCTGAGTTAGGGTATGAGGTAGCGCAAAGTAACGCTGCATGGATTCTTGACAAGTACGGAGAACATAGCATGTGCTTGGGAGAATCTGGCTTTTGTACAGATGCAGAAAGGCATCAGCGGGCACATTCTTTGTGGTGGCAAGCATCTGAGCAGGGTAACGAACATGCTGCTTTGCTGATTGGGGATGCATATTACTATGGTCAGGGTACTGAGAGGGATTTTGAACGTGCAGCAGAGGCTTACAAGCATGCTAAGTCCCAATCTAATGCACAGGCCATGTTCAACCTCGGCTACATGCATGAGCATGGACAAGGATTACCTTTGGATCTCCATCTTGCCAAACGTTTCTATGATCAAGCCCTAGAGATTGATCCAGCAGCAAAGTTACCAGTCACGCTAGCCCTTGCAAGCTTATGGATACGAAAGAATTATGCCGATGGTTTTCTGGTCCATTTGATCGACTCATTGCCTGAAGTCTATCCAAAATTGGAAGAATGGATAGATGACGTGTTGCTGGAGGAAGGAAATGCAACAATATTGACTCTTTTTGTTTGTCTCCTCACTGTCCTATATCTCCGTGAGCGACAACGCAGGCATGCTGTAGTAGTCCCTGCTGGAGTGGCTATGCCGCACCAACCAAATGAGCTTGTTGCACCTGCACCTGTCATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0030163 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

688

Amino Acids

77.02

Weight (kDa)

5.87

Isoelectric Point (pI)

43.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sel1	PF08238	258 - 292	1.8e-06	Sel1 repeat
Sel1	PF08238	294 - 327	3e-07	Sel1 repeat
Sel1	PF08238	332 - 364	5.6e-07	Sel1 repeat
Sel1	PF08238	370 - 401	9e-06	Sel1 repeat
Sel1	PF08238	555 - 586	2.7e-06	Sel1 repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008995)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46030 AT2G46030 AT2G46030 AT2G46030
fragaria_vesca	FvH4_5g05040
malus_domestica	MD00G1171400.v1.1 MD06G1177800.v1.1 MD06G1179100.v1.1 MD14G1184400.v1.1
prunus_persica	Prupe.5G177000_v2.0.a1
pyrus_communis	pycom06g15820 pycom14g15340
rosa_chinensis	RchiOBHm_Chr7g0194001
rosa_laevigata	RLG00000004224
rosa_multiflora	Rmu_sc0033848.1_g000001
rosa_roxburghii	Rroxscaffold_3G00261630
rosa_rugosa	Rorug07G0013100
rosa_samantha	Rh7AG140300 Rh7BG140800 Rh7CG144300 Rh7DG141600
rosa_wichuraiana	Rw7G011970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	999
AarI	CACCTGC	1 cut(s)	2059
Acc36I	ACCTGC	1 cut(s)	2059
AccI	GTMKAC	1 cut(s)	336
AccII	CGCG	8 cut(s)	35, 77, 79, 377, 408, 422, 424, 509
AclI	AACGTT	1 cut(s)	1738
AclWI	GGATC	5 cut(s)	155, 661, 674, 1728, 1760
AcoI	YGGCCR	3 cut(s)	80, 132, 180
AcsI	RAATTY	1 cut(s)	766
AcuI	CTGAAG	2 cut(s)	702, 1887
AcyI	GRCGYC	2 cut(s)	250, 395
AfiI	CCNNNNNNNGG	4 cut(s)	137, 304, 435, 838
AflII	CTTAAG	1 cut(s)	1256
AflIII	ACRYGT	1 cut(s)	1902
AgsI	TTSAA	4 cut(s)	277, 636, 1619, 1678
AhlI	ACTAGT	1 cut(s)	1294
AjiI	CACGTC	1 cut(s)	1903
AjnI	CCWGG	1 cut(s)	1271
Alw21I	GWGCWC	2 cut(s)	234, 435
Alw26I	GTCTC	1 cut(s)	1955
AlwI	GGATC	5 cut(s)	155, 661, 674, 1728, 1760
AlwNI	CAGNNNCTG	1 cut(s)	742
Ama87I	CYCGRG	2 cut(s)	238, 434
AoxI	GGCC	7 cut(s)	80, 132, 180, 477, 790, 1310, 1668
ApeKI	GCWGC	8 cut(s)	401, 611, 1082, 1190, 1430, 1562, 1625, 1772
ApoI	RAATTY	1 cut(s)	766
Asp700I	GAANNNNTTC	1 cut(s)	623
AspA2I	CCTAGG	1 cut(s)	881
AspLEI	GCGC	5 cut(s)	79, 364, 424, 825, 1420
AspS9I	GGNCC	3 cut(s)	426, 1310, 1843
AsuC2I	CCSGG	4 cut(s)	131, 239, 240, 299
AsuHPI	GGTGA	6 cut(s)	25, 93, 595, 661, 673, 914
AsuII	TTCGAA	1 cut(s)	261
AsuNHI	GCTAGC	1 cut(s)	1792
AvaI	CYCGRG	2 cut(s)	238, 434
AvaII	GGWCC	2 cut(s)	426, 1843
AvrII	CCTAGG	1 cut(s)	881
BaeGI	GKGCMC	3 cut(s)	1110, 1339, 1519
BamHI	GGATCC	1 cut(s)	666
BanII	GRGCYC	3 cut(s)	234, 245, 813
BarI	GAAGNNNNNNTAC	4 cut(s)	485, 517, 1034, 1066
BauI	CACGAG	1 cut(s)	244
Bbv12I	GWGCWC	2 cut(s)	234, 435
BbvI	GCAGC	8 cut(s)	388, 623, 1069, 1177, 1417, 1549, 1637, 1784
BccI	CCATC	7 cut(s)	263, 529, 1000, 1326, 1387, 1734, 1826
BceAI	ACGGC	6 cut(s)	47, 67, 154, 375, 529, 810
BcgI	CGANNNNNNTGC	2 cut(s)	1544, 1578
BciT130I	CCWGG	1 cut(s)	1273
BciVI	GTATCC	2 cut(s)	222, 1806
BclI	TGATCA	1 cut(s)	1747
BcnI	CCSGG	4 cut(s)	131, 239, 240, 299
BcoDI	GTCTC	1 cut(s)	1955
BcuI	ACTAGT	1 cut(s)	1294
BfaI	CTAG	5 cut(s)	882, 915, 1295, 1757, 1793
BfmI	CTRYAG	1 cut(s)	1995
BfoI	RGCGCY	1 cut(s)	365
BfrI	CTTAAG	1 cut(s)	1256
BfuAI	ACCTGC	1 cut(s)	2059
BfuI	GTATCC	2 cut(s)	222, 1806
BlnI	CCTAGG	1 cut(s)	881
BmcAI	AGTACT	4 cut(s)	311, 1070, 1125, 1178
Bme1390I	CCNGG	5 cut(s)	131, 239, 240, 299, 1273
Bme18I	GGWCC	2 cut(s)	426, 1843
BmeT110I	CYCGRG	2 cut(s)	238, 434
BmgBI	CACGTC	1 cut(s)	1903
BmgT120I	GGNCC	3 cut(s)	426, 1310, 1843
BmiI	GGNNCC	2 cut(s)	668, 1311
BmrFI	CCNGG	5 cut(s)	131, 239, 240, 299, 1273
BmrI	ACTGGG	1 cut(s)	196
BmsI	GCATC	6 cut(s)	980, 1087, 1486, 1516, 1547, 1570
BmtI	GCTAGC	1 cut(s)	1796
BmuI	ACTGGG	1 cut(s)	196
BplI	GAGNNNNNCTC	2 cut(s)	299, 331
BpmI	CTGGAG	6 cut(s)	764, 974, 1266, 1361, 1931, 2031
Bpu10I	CCTNAGC	1 cut(s)	837
Bpu14I	TTCGAA	1 cut(s)	261
BpuEI	CTTGAG	2 cut(s)	842, 1372
BpuMI	CCSGG	4 cut(s)	131, 239, 240, 299
BsaAI	YACGTR	1 cut(s)	492
BsaBI	GATNNNNATC	1 cut(s)	1725
BsaHI	GRCGYC	2 cut(s)	250, 395
BsaWI	WCCGGW	1 cut(s)	646
BsaXI	ACNNNNNCTCC	2 cut(s)	912, 942
Bsc4I	CCNNNNNNNGG	4 cut(s)	137, 304, 435, 838
Bse118I	RCCGGY	1 cut(s)	658
Bse1I	ACTGG	5 cut(s)	30, 191, 1174, 1344, 1784
Bse3DI	GCAATG	2 cut(s)	783, 1859
Bse8I	GATNNNNATC	1 cut(s)	1725
BseBI	CCWGG	1 cut(s)	1273
BseGI	GGATG	5 cut(s)	971, 1011, 1366, 1398, 1585
BseJI	GATNNNNATC	1 cut(s)	1725
BseLI	CCNNNNNNNGG	4 cut(s)	137, 304, 435, 838
BseMI	GCAATG	2 cut(s)	783, 1859
BseMII	CTCAG	7 cut(s)	182, 770, 826, 1077, 1389, 1533, 1596
BseNI	ACTGG	5 cut(s)	30, 191, 1174, 1344, 1784
BseRI	GAGGAG	4 cut(s)	239, 242, 933, 1943
BseSI	GKGCMC	3 cut(s)	1110, 1339, 1519
BseX3I	CGGCCG	3 cut(s)	80, 132, 180
BseXI	GCAGC	8 cut(s)	388, 623, 1069, 1177, 1417, 1549, 1637, 1784
BseYI	CCCAGC	1 cut(s)	923
BsgI	GTGCAG	2 cut(s)	1644, 2037
Bsh1236I	CGCG	8 cut(s)	35, 77, 79, 377, 408, 422, 424, 509
Bsh1285I	CGRYCG	3 cut(s)	83, 135, 183
BshFI	GGCC	7 cut(s)	82, 134, 182, 479, 792, 1312, 1670
BsiEI	CGRYCG	3 cut(s)	83, 135, 183
BsiHKAI	GWGCWC	2 cut(s)	234, 435
BsiHKCI	CYCGRG	2 cut(s)	238, 434
BsiSI	CCGG	6 cut(s)	131, 239, 299, 351, 647, 659
BslFI	GGGAC	5 cut(s)	203, 237, 468, 1636, 1988
BslI	CCNNNNNNNGG	4 cut(s)	137, 304, 435, 838
BsmAI	GTCTC	1 cut(s)	1955
BsmFI	GGGAC	5 cut(s)	203, 237, 468, 1636, 1988
BsmI	GAATGC	1 cut(s)	1214
BsnI	GGCC	7 cut(s)	82, 134, 182, 479, 792, 1312, 1670
BsoBI	CYCGRG	2 cut(s)	238, 434
Bsp119I	TTCGAA	1 cut(s)	261
Bsp1286I	GDGCHC	7 cut(s)	234, 245, 435, 813, 1110, 1339, 1519
Bsp1407I	TGTACA	2 cut(s)	1287, 1490
Bsp143I	GATC	7 cut(s)	160, 387, 666, 1720, 1747, 1765, 1851
Bsp19I	CCATGG	1 cut(s)	1313
BspANI	GGCC	7 cut(s)	82, 134, 182, 479, 792, 1312, 1670
BspCNI	CTCAG	7 cut(s)	181, 769, 825, 1078, 1390, 1534, 1597
BspFNI	CGCG	8 cut(s)	35, 77, 79, 377, 408, 422, 424, 509
BspLI	GGNNCC	2 cut(s)	668, 1311
BspMI	ACCTGC	1 cut(s)	2059
BspOI	GCTAGC	1 cut(s)	1796
BspPI	GGATC	5 cut(s)	155, 661, 674, 1728, 1760
BspT104I	TTCGAA	1 cut(s)	261
BspTI	CTTAAG	1 cut(s)	1256
BsrDI	GCAATG	2 cut(s)	783, 1859
BsrFI	RCCGGY	1 cut(s)	658
BsrGI	TGTACA	2 cut(s)	1287, 1490
BsrI	ACTGG	5 cut(s)	30, 191, 1174, 1344, 1784
BssAI	RCCGGY	1 cut(s)	658
BssMI	GATC	7 cut(s)	160, 387, 666, 1720, 1747, 1765, 1851
BssNI	GRCGYC	2 cut(s)	250, 395
BssSI	CACGAG	1 cut(s)	244
BssT1I	CCWWGG	3 cut(s)	480, 881, 1313
Bst2BI	CACGAG	1 cut(s)	244
Bst2UI	CCWGG	1 cut(s)	1273
Bst4CI	ACNGT	5 cut(s)	322, 987, 1202, 1282, 1960
Bst6I	CTCTTC	1 cut(s)	678
BstACI	GRCGYC	2 cut(s)	250, 395
BstAFI	CTTAAG	1 cut(s)	1256
BstAUI	TGTACA	2 cut(s)	1287, 1490
BstBAI	YACGTR	1 cut(s)	492
BstBI	TTCGAA	1 cut(s)	261
BstDSI	CCRYGG	3 cut(s)	406, 507, 1313
BstF5I	GGATG	5 cut(s)	971, 1011, 1366, 1398, 1585
BstFNI	CGCG	8 cut(s)	35, 77, 79, 377, 408, 422, 424, 509
BstH2I	RGCGCY	1 cut(s)	365
BstHHI	GCGC	5 cut(s)	79, 364, 424, 825, 1420
BstKTI	GATC	7 cut(s)	163, 390, 669, 1723, 1750, 1768, 1854
BstMAI	GTCTC	1 cut(s)	1955
BstMBI	GATC	7 cut(s)	160, 387, 666, 1720, 1747, 1765, 1851
BstMCI	CGRYCG	3 cut(s)	83, 135, 183
BstMWI	GCNNNNNNNGC	9 cut(s)	41, 131, 401, 421, 430, 611, 920, 1631, 2015
BstNI	CCWGG	1 cut(s)	1273
BstNSI	RCATGY	6 cut(s)	1173, 1468, 1562, 1646, 1693, 1994
BstSCI	CCNGG	5 cut(s)	129, 237, 238, 297, 1271
BstSFI	CTRYAG	1 cut(s)	1995
BstSLI	GKGCMC	3 cut(s)	1110, 1339, 1519
BstUI	CGCG	8 cut(s)	35, 77, 79, 377, 408, 422, 424, 509
BstV1I	GCAGC	8 cut(s)	388, 623, 1069, 1177, 1417, 1549, 1637, 1784
BstX2I	RGATCY	2 cut(s)	666, 1720
BstYI	RGATCY	2 cut(s)	666, 1720
BstZI	CGGCCG	3 cut(s)	80, 132, 180
BsuI	GTATCC	2 cut(s)	222, 1806
BsuRI	GGCC	7 cut(s)	82, 134, 182, 479, 792, 1312, 1670
BtgI	CCRYGG	3 cut(s)	406, 507, 1313
BtrI	CACGTC	1 cut(s)	1903
BtsCI	GGATG	5 cut(s)	971, 1011, 1366, 1398, 1585
BtsIMutI	CAGTG	2 cut(s)	1337, 1956
BveI	ACCTGC	1 cut(s)	2059
CaiI	CAGNNNCTG	1 cut(s)	742
CfoI	GCGC	5 cut(s)	79, 364, 424, 825, 1420
Cfr10I	RCCGGY	1 cut(s)	658
Cfr13I	GGNCC	3 cut(s)	426, 1310, 1843
Cfr42I	CCGCGG	2 cut(s)	409, 510
Cfr9I	CCCGGG	1 cut(s)	238
CpoI	CGGWCCG	1 cut(s)	426
CseI	GACGC	3 cut(s)	239, 383, 384
CspI	CGGWCCG	1 cut(s)	426
DpnI	GATC	7 cut(s)	162, 389, 668, 1722, 1749, 1767, 1853
DpnII	GATC	7 cut(s)	160, 387, 666, 1720, 1747, 1765, 1851
EaeI	YGGCCR	3 cut(s)	80, 132, 180
EagI	CGGCCG	3 cut(s)	80, 132, 180
Eam1104I	CTCTTC	1 cut(s)	678
EarI	CTCTTC	1 cut(s)	678
EciI	GGCGGA	2 cut(s)	49, 280
Ecl136II	GAGCTC	1 cut(s)	232
EclXI	CGGCCG	3 cut(s)	80, 132, 180
Eco130I	CCWWGG	3 cut(s)	480, 881, 1313
Eco24I	GRGCYC	3 cut(s)	234, 245, 813
Eco47I	GGWCC	2 cut(s)	426, 1843
Eco52I	CGGCCG	3 cut(s)	80, 132, 180
Eco53kI	GAGCTC	1 cut(s)	232
Eco57I	CTGAAG	2 cut(s)	702, 1887
Eco88I	CYCGRG	2 cut(s)	238, 434
EcoICRI	GAGCTC	1 cut(s)	232
EcoRI	GAATTC	1 cut(s)	766
EcoRII	CCWGG	1 cut(s)	1271
EcoT14I	CCWWGG	3 cut(s)	480, 881, 1313
EcoT22I	ATGCAT	2 cut(s)	1585, 1695
EcoT38I	GRGCYC	3 cut(s)	234, 245, 813
ErhI	CCWWGG	3 cut(s)	480, 881, 1313
FaqI	GGGAC	5 cut(s)	203, 237, 468, 1636, 1988
FauI	CCCGC	4 cut(s)	160, 413, 1097, 1506
FbaI	TGATCA	1 cut(s)	1747
FblI	GTMKAC	1 cut(s)	336
FokI	GGATG	5 cut(s)	958, 1018, 1373, 1405, 1592
FriOI	GRGCYC	3 cut(s)	234, 245, 813
FspBI	CTAG	5 cut(s)	882, 915, 1295, 1757, 1793
GlaI	GCGC	5 cut(s)	78, 363, 423, 824, 1419
GsaI	CCCAGC	1 cut(s)	927
GsuI	CTGGAG	6 cut(s)	764, 974, 1266, 1361, 1931, 2031
HaeII	RGCGCY	1 cut(s)	365
HaeIII	GGCC	7 cut(s)	82, 134, 182, 479, 792, 1312, 1670
HapII	CCGG	6 cut(s)	131, 239, 299, 351, 647, 659
HgaI	GACGC	3 cut(s)	239, 383, 384
HhaI	GCGC	5 cut(s)	79, 364, 424, 825, 1420
Hin1I	GRCGYC	2 cut(s)	250, 395
Hin6I	GCGC	5 cut(s)	77, 362, 422, 823, 1418
HinP1I	GCGC	5 cut(s)	77, 362, 422, 823, 1418
HincII	GTYRAC	2 cut(s)	337, 1205
HindII	GTYRAC	2 cut(s)	337, 1205
HindIII	AAGCTT	1 cut(s)	1804
HpaII	CCGG	6 cut(s)	131, 239, 299, 351, 647, 659
HphI	GGTGA	6 cut(s)	25, 93, 595, 661, 673, 914
Hpy166II	GTNNAC	3 cut(s)	337, 489, 1205
Hpy188III	TCNNGA	7 cut(s)	67, 628, 743, 953, 1094, 1329, 1442
Hpy8I	GTNNAC	3 cut(s)	337, 489, 1205
Hpy99I	CGWCG	1 cut(s)	140
HpyAV	CCTTC	5 cut(s)	754, 865, 1072, 1363, 1910
HpyCH4III	ACNGT	5 cut(s)	322, 987, 1202, 1282, 1960
HpyCH4IV	ACGT	5 cut(s)	491, 1020, 1621, 1738, 1902
HpyF10VI	GCNNNNNNNGC	9 cut(s)	41, 131, 401, 421, 430, 611, 920, 1631, 2015
HpySE526I	ACGT	5 cut(s)	491, 1020, 1621, 1738, 1902
Hsp92I	GRCGYC	2 cut(s)	250, 395
HspAI	GCGC	5 cut(s)	77, 362, 422, 823, 1418
Ksp22I	TGATCA	1 cut(s)	1747
KspI	CCGCGG	2 cut(s)	409, 510
Kzo9I	GATC	7 cut(s)	160, 387, 666, 1720, 1747, 1765, 1851
LmnI	GCTCC	4 cut(s)	229, 353, 677, 920
Lsp1109I	GCAGC	8 cut(s)	388, 623, 1069, 1177, 1417, 1549, 1637, 1784
LweI	GCATC	6 cut(s)	980, 1087, 1486, 1516, 1547, 1570
MaeI	CTAG	5 cut(s)	882, 915, 1295, 1757, 1793
MaeII	ACGT	5 cut(s)	491, 1020, 1621, 1738, 1902
MaeIII	GTNAC	6 cut(s)	64, 827, 1424, 1550, 1779, 1786
MalI	GATC	7 cut(s)	162, 389, 668, 1722, 1749, 1767, 1853
MboI	GATC	7 cut(s)	160, 387, 666, 1720, 1747, 1765, 1851
MboII	GAAGA	9 cut(s)	250, 544, 695, 731, 734, 1054, 1057, 1259, 1898
MflI	RGATCY	2 cut(s)	666, 1720
MhlI	GDGCHC	7 cut(s)	234, 245, 435, 813, 1110, 1339, 1519
MluCI	AATT	6 cut(s)	329, 599, 766, 937, 1822, 1880
MlyI	GAGTC	9 cut(s)	140, 160, 170, 197, 332, 635, 1352, 1850, 1930
MmeI	TCCRAC	1 cut(s)	188
Mph1103I	ATGCAT	2 cut(s)	1585, 1695
MroXI	GAANNNNTTC	1 cut(s)	623
MseI	TTAA	4 cut(s)	116, 1023, 1257, 1352
MslI	CAYNNNNRTG	2 cut(s)	847, 1698
MspA1I	CMGCKG	5 cut(s)	401, 408, 509, 614, 1513
MspCI	CTTAAG	1 cut(s)	1256
MspI	CCGG	6 cut(s)	131, 239, 299, 351, 647, 659
MspR9I	CCNGG	5 cut(s)	131, 239, 240, 299, 1273
Mva1269I	GAATGC	1 cut(s)	1214
MvaI	CCWGG	1 cut(s)	1273
MvnI	CGCG	8 cut(s)	35, 77, 79, 377, 408, 422, 424, 509
MwoI	GCNNNNNNNGC	9 cut(s)	41, 131, 401, 421, 430, 611, 920, 1631, 2015
NciI	CCSGG	4 cut(s)	131, 239, 240, 299
NcoI	CCATGG	1 cut(s)	1313
NdeII	GATC	7 cut(s)	160, 387, 666, 1720, 1747, 1765, 1851
NheI	GCTAGC	1 cut(s)	1792
NlaIV	GGNNCC	2 cut(s)	668, 1311
NmeAIII	GCCGAG	5 cut(s)	158, 185, 631, 737, 1662
NmuCI	GTSAC	3 cut(s)	64, 827, 1786
NsiI	ATGCAT	2 cut(s)	1585, 1695
NspI	RCATGY	6 cut(s)	1173, 1468, 1562, 1646, 1693, 1994
NspV	TTCGAA	1 cut(s)	261
PaeI	GCATGC	3 cut(s)	1173, 1646, 1994
PaqCI	CACCTGC	1 cut(s)	2059
PasI	CCCWGGG	1 cut(s)	1272
PcsI	WCGNNNNNNNCGW	3 cut(s)	198, 381, 426
PctI	GAATGC	1 cut(s)	1214
PdmI	GAANNNNTTC	1 cut(s)	623
PfeI	GAWTC	6 cut(s)	7, 16, 739, 1090, 1438, 1478
PflFI	GACNNNGTC	1 cut(s)	341
PleI	GAGTC	9 cut(s)	140, 160, 170, 197, 332, 635, 1351, 1850, 1930
PpsI	GAGTC	9 cut(s)	140, 160, 170, 197, 332, 635, 1351, 1850, 1930
Ppu21I	YACGTR	1 cut(s)	492
PsiI	TTATAA	1 cut(s)	999
Psp124BI	GAGCTC	1 cut(s)	234
Psp1406I	AACGTT	1 cut(s)	1738
Psp6I	CCWGG	1 cut(s)	1271
PspFI	CCCAGC	1 cut(s)	923
PspGI	CCWGG	1 cut(s)	1271
PspN4I	GGNNCC	2 cut(s)	668, 1311
PspPI	GGNCC	3 cut(s)	426, 1310, 1843
PstNI	CAGNNNCTG	1 cut(s)	742
PsuI	RGATCY	2 cut(s)	666, 1720
PsyI	GACNNNGTC	1 cut(s)	341
PvuII	CAGCTG	1 cut(s)	614
RseI	CAYNNNNRTG	2 cut(s)	847, 1698
Rsr2I	CGGWCCG	1 cut(s)	426
RsrII	CGGWCCG	1 cut(s)	426
SacI	GAGCTC	1 cut(s)	234
SacII	CCGCGG	2 cut(s)	409, 510
SalI	GTCGAC	1 cut(s)	335
SaqAI	TTAA	4 cut(s)	116, 1023, 1257, 1352
Sau3AI	GATC	7 cut(s)	160, 387, 666, 1720, 1747, 1765, 1851
Sau96I	GGNCC	3 cut(s)	426, 1310, 1843
ScaI	AGTACT	4 cut(s)	311, 1070, 1125, 1178
SchI	GAGTC	9 cut(s)	140, 160, 170, 197, 332, 635, 1352, 1850, 1930
ScrFI	CCNGG	5 cut(s)	131, 239, 240, 299, 1273
SduI	GDGCHC	7 cut(s)	234, 245, 435, 813, 1110, 1339, 1519
SfaNI	GCATC	6 cut(s)	980, 1087, 1486, 1516, 1547, 1570
SfcI	CTRYAG	1 cut(s)	1995
Sfr303I	CCGCGG	2 cut(s)	409, 510
SfuI	TTCGAA	1 cut(s)	261
SgrBI	CCGCGG	2 cut(s)	409, 510
SinI	GGWCC	2 cut(s)	426, 1843
SmaI	CCCGGG	1 cut(s)	240
SmiMI	CAYNNNNRTG	2 cut(s)	847, 1698
SmlI	CTYRAG	3 cut(s)	857, 1256, 1387
SmoI	CTYRAG	3 cut(s)	857, 1256, 1387
SpeI	ACTAGT	1 cut(s)	1294
SphI	GCATGC	3 cut(s)	1173, 1646, 1994
Sse9I	AATT	6 cut(s)	329, 599, 766, 937, 1822, 1880
SspI	AATATT	1 cut(s)	1932
SspMI	CTAG	5 cut(s)	882, 915, 1295, 1757, 1793
SstI	GAGCTC	1 cut(s)	234
StyD4I	CCNGG	5 cut(s)	129, 237, 238, 297, 1271
StyI	CCWWGG	3 cut(s)	480, 881, 1313
TaaI	ACNGT	5 cut(s)	322, 987, 1202, 1282, 1960
TaiI	ACGT	5 cut(s)	494, 1023, 1624, 1741, 1905
TaqI	TCGA	8 cut(s)	234, 261, 326, 336, 390, 530, 1093, 1854
TasI	AATT	6 cut(s)	329, 599, 766, 937, 1822, 1880
TatI	WGTACW	7 cut(s)	309, 591, 1068, 1123, 1176, 1287, 1490
TauI	GCSGC	7 cut(s)	38, 82, 125, 144, 509, 519, 2026
TfiI	GAWTC	6 cut(s)	7, 16, 739, 1090, 1438, 1478
Tru1I	TTAA	4 cut(s)	116, 1023, 1257, 1352
Tru9I	TTAA	4 cut(s)	116, 1023, 1257, 1352
TscAI	CASTG	2 cut(s)	1344, 1963
TseFI	GTSAC	3 cut(s)	64, 827, 1786
TseI	GCWGC	8 cut(s)	401, 611, 1082, 1190, 1430, 1562, 1625, 1772
Tsp45I	GTSAC	3 cut(s)	64, 827, 1786
TspDTI	ATGAA	2 cut(s)	20, 1229
TspGWI	ACGGA	4 cut(s)	331, 418, 1467, 1961
TspMI	CCCGGG	1 cut(s)	238
TspRI	CASTG	2 cut(s)	1344, 1963
Tth111I	GACNNNGTC	1 cut(s)	341
Vha464I	CTTAAG	1 cut(s)	1256
VpaK11BI	GGWCC	2 cut(s)	426, 1843
XapI	RAATTY	1 cut(s)	766
XceI	RCATGY	6 cut(s)	1173, 1468, 1562, 1646, 1693, 1994
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1336
XmaI	CCCGGG	1 cut(s)	238
XmaJI	CCTAGG	1 cut(s)	881
XmiI	GTMKAC	1 cut(s)	336
XmnI	GAANNNNTTC	1 cut(s)	623
XspI	CTAG	5 cut(s)	882, 915, 1295, 1757, 1793
ZrmI	AGTACT	4 cut(s)	311, 1070, 1125, 1178
Zsp2I	ATGCAT	2 cut(s)	1585, 1695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.