Rorug07G0044000

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0013364
Physical Location & Seq
Forward (+)
3204400 .. 3205866
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0044000.1

Sequence Viewer

Length: 1467 bp
ATGGATTTGAAAAGTATAGTTTGCGATTTAAAGGACTACCTTAAACCCACAACCTCCTCTACTACTAGAGCTTTAGAGCAGCGCCTCTTTCATCTATTACAACAGAGCTGCAGCACAGTCCGAAATCTGACCCAAATTCATACACAGATACTAGTCCATGGATTCACCCAGAAAAGCTACCTTCTTTCTAAGCTACTAGCGTTGTACGTAGGTTGTGGGTGTCTTGATAATGCGCTGAGAGTTTTCGGGAATGTAAAGAGTCCGAGTACTACTGTGTGGAACCAGATAATCAGAGGGTATGCTGGTAGCGAAACTCCGGGGAAGGCGGTTGAGTTGTATAACAGGCTGGCGGCGACGGAAACCGAGCCGGATGGGTATACGTATTCGTATGTTGTTAGTGCTTGCGCTAGGTCAGGGATGGTTAGAGAGGGGGAACAGTTGCATGGGAGAGTTTTGGGTGGTGGGTTTGGTTCTAATGTGTTTGTTCAGACCAGTTTGGTTAGTTTGTATGCAGGTGGTGGAGGGTTGAGTGGTGGTGTTGAGTGCGCGCGCAAGGTGTTTGATGAAATGCGTGAGAGGAGTGTTGTCAGTTGGAATACGCTGCTTTCGGGGTATGTGAGGAGCCGGGATTTTGATGGGGCGCGGCGAGTTTTTGATGGGATGCCGGAGAGGAATGTGGTGTCGTGGACGACAATGATTGCGGGGTGTGCTCAGAATGGGAGGTGTAAGGAAGCTTTGAGTTTGTTTGGGCGGATGAGGAAGGCGAATGTGGAACCCGACCAGGTTGCGCTAGTGGCGGTGTTATCGGCCTGTGCTGAGATTGGGGACTTGAGATTCGGAAGGTGGGTTCACTGGTACGTTGAAGAGGGATTGTGTGTTAGAGCTAAGTCGCGGTTGGTGACTTTGTACAATGCACTCATACATATGTACGCCAGTTGTGGTTTGGTTGATGAAGCCTATAAGGTGTTCAAGCAGATGCCTAGACGGAGCACTGTCTCGTGGACCAGCATCATAGTTGGGTTCGCAAAGCAGGGTCGCGGGGAGGAAGCTCTTCGTATATTTCAATTGATGCTGAGCTCGGAACTTGACGATGTAAGACCCGATGAAATTACTTTCCTTGGGGTGTTGTGTGCCTGTAGCCATGCTGGATTAGTTGATGAGGGCCGAAGACTTTTCAAGTTCATGACGCAGACTTGGGGACTCGAACCAAGGATTGAGCACTATGGCTGCATGGTCGATCTATTAAGCCGTGCTGGTCTTTTAAATGAAGCTCATGTACTTGTGGAGACTATGCCAATGGAGCCAAATGACGCTGTGTGGGGAGCTCTCCTCGGCGGTTGCATGCTTCACAAGAATTCTGAGCTTGCATCACTTGCAGCTCAAAAGTTAACAGTTGCACTTGACCCTGACCAAGCTGCAGGGTATCTTGTGCTCTTATCGAATGTGTATGCTTCTGCTAAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RuvX

Protein Analysis

488

Amino Acids

53.79

Weight (kDa)

8.29

Isoelectric Point (pI)

40.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 88 - 137 3.9e-07 PPR repeat family
PPR_2 PF13041 194 - 226 1.9e-06 PPR repeat family
PPR PF01535 196 - 226 1.4e-06 PPR repeat
PPR_2 PF13041 224 - 272 4.8e-11 PPR repeat family
PPR PF01535 227 - 256 2.4e-09 PPR repeat
PPR_2 PF13041 301 - 330 7e-06 PPR repeat family
PPR PF01535 302 - 329 5.4e-07 PPR repeat
PPR_1 PF12854 303 - 326 2.4e-06 PPR repeat
PPR_2 PF13041 330 - 380 1.8e-06 PPR repeat family
PPR PF01535 332 - 360 4.4e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013364)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52905
fragaria_vesca FvH4_5g02300 FvH4_5g02300 FvH4_5g02300
malus_domestica MD14G1103600.v1.1
prunus_persica Prupe.5G098900_v2.0.a1
pyrus_communis pycom14g09950
rosa_chinensis RchiOBHm_Chr7g0197851
rosa_laevigata RLG00000003905
rosa_roxburghii Rroxscaffold_3G00258140
rosa_rugosa Rorug07G0044000
rosa_samantha Rh7AG167900 Rh7AG168000 Rh7BG170800 Rh7CG177200 Rh7CG177300 Rh7DG169700
rosa_wichuraiana Rw7G014630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 503
Acc36I ACCTGC 1 cut(s) 503
AccI GTMKAC 1 cut(s) 377
AccII CGCG 5 cut(s) 548, 550, 643, 892, 1038
AciI CCGC 9 cut(s) 326, 350, 643, 701, 751, 797, 892, 1038, 1335
AcsI RAATTY 2 cut(s) 135, 1354
AfaI GTAC 6 cut(s) 206, 268, 857, 908, 929, 1278
AgsI TTSAA 5 cut(s) 10, 863, 970, 1064, 1177
AhlI ACTAGT 1 cut(s) 151
AjnI CCWGG 1 cut(s) 780
AloI GAACNNNNNNTCC 2 cut(s) 831, 863
Alw21I GWGCWC 6 cut(s) 712, 992, 1079, 1221, 1327, 1434
Alw26I GTCTC 2 cut(s) 1000, 1280
AoxI GGCC 2 cut(s) 807, 1162
ApeKI GCWGC 7 cut(s) 79, 108, 111, 601, 1227, 1376, 1415
ApoI RAATTY 2 cut(s) 135, 1354
ArsI GACNNNNNNTTYG 2 cut(s) 818, 850
Asp700I GAANNNNTTC 1 cut(s) 1050
AspLEI GCGC 8 cut(s) 84, 235, 407, 548, 550, 552, 643, 790
AspS9I GGNCC 2 cut(s) 1002, 1162
AsuC2I CCSGG 2 cut(s) 318, 626
AsuHPI GGTGA 2 cut(s) 157, 910
AvaII GGWCC 1 cut(s) 1002
BanII GRGCYC 2 cut(s) 1079, 1327
BarI GAAGNNNNNNTAC 2 cut(s) 1260, 1292
BauI CACGAG 1 cut(s) 997
BbsI GAAGAC 1 cut(s) 1174
Bbv12I GWGCWC 6 cut(s) 712, 992, 1079, 1221, 1327, 1434
BbvI GCAGC 7 cut(s) 91, 95, 123, 588, 1214, 1388, 1402
BccI CCATC 4 cut(s) 365, 412, 629, 650
BceAI ACGGC 1 cut(s) 1233
BcgI CGANNNNNNTGC 2 cut(s) 767, 801
BciT130I CCWGG 1 cut(s) 782
BcnI CCSGG 2 cut(s) 318, 626
BcoDI GTCTC 2 cut(s) 1000, 1280
BcuI ACTAGT 1 cut(s) 151
BfaI CTAG 6 cut(s) 66, 152, 197, 408, 791, 981
BfmI CTRYAG 3 cut(s) 109, 1135, 1416
BfoI RGCGCY 1 cut(s) 85
BfuAI ACCTGC 1 cut(s) 503
BisI GCNGC 9 cut(s) 80, 109, 112, 351, 602, 644, 1228, 1377, 1416
BlpI GCTNAGC 1 cut(s) 1073
BlsI GCNGC 9 cut(s) 81, 110, 113, 352, 603, 645, 1229, 1378, 1417
BmcAI AGTACT 1 cut(s) 268
Bme1390I CCNGG 3 cut(s) 318, 626, 782
Bme18I GGWCC 1 cut(s) 1002
BmgT120I GGNCC 2 cut(s) 1002, 1162
BmiI GGNNCC 4 cut(s) 281, 623, 774, 1302
BmrFI CCNGG 3 cut(s) 318, 626, 782
BmsI GCATC 5 cut(s) 651, 966, 1017, 1059, 1376
BpiI GAAGAC 1 cut(s) 1174
BplI GAGNNNNNCTC 2 cut(s) 1314, 1346
Bpu1102I GCTNAGC 1 cut(s) 1073
BpuEI CTTGAG 1 cut(s) 850
BpuMI CCSGG 2 cut(s) 318, 626
BsaAI YACGTR 2 cut(s) 208, 381
BsaJI CCNNGG 5 cut(s) 157, 317, 1117, 1208, 1330
Bse1I ACTGG 3 cut(s) 492, 857, 933
BseBI CCWGG 1 cut(s) 782
BseDI CCNNGG 5 cut(s) 157, 317, 1117, 1208, 1330
BseGI GGATG 4 cut(s) 376, 423, 666, 759
BseMII CTCAG 5 cut(s) 227, 725, 807, 1064, 1350
BseNI ACTGG 3 cut(s) 492, 857, 933
BsePI GCGCGC 2 cut(s) 546, 548
BseRI GAGGAG 4 cut(s) 46, 592, 634, 1319
BseXI GCAGC 7 cut(s) 91, 95, 123, 588, 1214, 1388, 1402
Bsh1236I CGCG 5 cut(s) 548, 550, 643, 892, 1038
BshFI GGCC 2 cut(s) 809, 1164
BsiHKAI GWGCWC 6 cut(s) 712, 992, 1079, 1221, 1327, 1434
BsiSI CCGG 4 cut(s) 317, 368, 625, 665
BslFI GGGAC 2 cut(s) 839, 1212
BsmAI GTCTC 2 cut(s) 1000, 1280
BsmFI GGGAC 2 cut(s) 839, 1212
BsnI GGCC 2 cut(s) 809, 1164
Bsp1286I GDGCHC 6 cut(s) 712, 992, 1079, 1221, 1327, 1434
Bsp1407I TGTACA 1 cut(s) 906
Bsp143I GATC 1 cut(s) 1237
Bsp1720I GCTNAGC 1 cut(s) 1073
Bsp19I CCATGG 1 cut(s) 157
BspACI CCGC 9 cut(s) 326, 350, 643, 701, 751, 797, 892, 1038, 1335
BspANI GGCC 2 cut(s) 809, 1164
BspCNI CTCAG 5 cut(s) 228, 724, 808, 1065, 1351
BspFNI CGCG 5 cut(s) 548, 550, 643, 892, 1038
BspHI TCATGA 1 cut(s) 1182
BspLI GGNNCC 4 cut(s) 281, 623, 774, 1302
BspMAI CTGCAG 2 cut(s) 113, 1420
BspMI ACCTGC 1 cut(s) 503
BspQI GCTCTTC 1 cut(s) 1056
BsrGI TGTACA 1 cut(s) 906
BsrI ACTGG 3 cut(s) 492, 857, 933
BssECI CCNNGG 5 cut(s) 157, 317, 1117, 1208, 1330
BssHII GCGCGC 2 cut(s) 546, 548
BssMI GATC 1 cut(s) 1237
BssNAI GTATAC 1 cut(s) 378
BssSI CACGAG 1 cut(s) 997
BssT1I CCWWGG 3 cut(s) 157, 1117, 1208
Bst1107I GTATAC 1 cut(s) 378
Bst2BI CACGAG 1 cut(s) 997
Bst2UI CCWGG 1 cut(s) 782
Bst4CI ACNGT 5 cut(s) 118, 274, 438, 994, 1393
Bst6I CTCTTC 2 cut(s) 858, 1056
BstAPI GCANNNNNTGC 1 cut(s) 1373
BstAUI TGTACA 1 cut(s) 906
BstBAI YACGTR 2 cut(s) 208, 381
BstC8I GCNNGC 6 cut(s) 348, 403, 548, 550, 1343, 1365
BstDEI CTNAG 7 cut(s) 189, 236, 711, 816, 885, 1073, 1359
BstDSI CCRYGG 1 cut(s) 157
BstF5I GGATG 4 cut(s) 376, 423, 666, 759
BstFNI CGCG 5 cut(s) 548, 550, 643, 892, 1038
BstH2I RGCGCY 1 cut(s) 85
BstHHI GCGC 8 cut(s) 84, 235, 407, 548, 550, 552, 643, 790
BstKTI GATC 1 cut(s) 1240
BstMAI GTCTC 2 cut(s) 1000, 1280
BstMBI GATC 1 cut(s) 1237
BstMWI GCNNNNNNNGC 4 cut(s) 707, 794, 1300, 1373
BstNI CCWGG 1 cut(s) 782
BstNSI RCATGY 1 cut(s) 1345
BstSCI CCNGG 3 cut(s) 316, 624, 780
BstSFI CTRYAG 3 cut(s) 109, 1135, 1416
BstSNI TACGTA 2 cut(s) 208, 381
BstUI CGCG 5 cut(s) 548, 550, 643, 892, 1038
BstV1I GCAGC 7 cut(s) 91, 95, 123, 588, 1214, 1388, 1402
BstV2I GAAGAC 1 cut(s) 1174
BstZ17I GTATAC 1 cut(s) 378
BsuRI GGCC 2 cut(s) 809, 1164
BtgI CCRYGG 1 cut(s) 157
BtsCI GGATG 4 cut(s) 376, 423, 666, 759
BtsIMutI CAGTG 2 cut(s) 850, 990
BveI ACCTGC 1 cut(s) 503
Cac8I GCNNGC 6 cut(s) 348, 403, 548, 550, 1343, 1365
CciI TCATGA 1 cut(s) 1182
CfoI GCGC 8 cut(s) 84, 235, 407, 548, 550, 552, 643, 790
Cfr13I GGNCC 2 cut(s) 1002, 1162
CseI GACGC 2 cut(s) 1195, 1319
CsiI ACCWGGT 1 cut(s) 780
Csp6I GTAC 6 cut(s) 205, 267, 856, 907, 928, 1277
CviAII CATG 7 cut(s) 158, 443, 1142, 1183, 1231, 1274, 1342
CviQI GTAC 6 cut(s) 205, 267, 856, 907, 928, 1277
DdeI CTNAG 7 cut(s) 189, 236, 711, 816, 885, 1073, 1359
DpnI GATC 1 cut(s) 1239
DpnII GATC 1 cut(s) 1237
DraI TTTAAA 2 cut(s) 30, 1263
Eam1104I CTCTTC 2 cut(s) 858, 1056
EarI CTCTTC 2 cut(s) 858, 1056
EciI GGCGGA 1 cut(s) 766
Ecl136II GAGCTC 2 cut(s) 1077, 1325
Eco105I TACGTA 2 cut(s) 208, 381
Eco130I CCWWGG 3 cut(s) 157, 1117, 1208
Eco24I GRGCYC 2 cut(s) 1079, 1327
Eco47I GGWCC 1 cut(s) 1002
Eco53kI GAGCTC 2 cut(s) 1077, 1325
EcoICRI GAGCTC 2 cut(s) 1077, 1325
EcoRI GAATTC 1 cut(s) 1354
EcoRII CCWGG 1 cut(s) 780
EcoT14I CCWWGG 3 cut(s) 157, 1117, 1208
EcoT38I GRGCYC 2 cut(s) 1079, 1327
ErhI CCWWGG 3 cut(s) 157, 1117, 1208
FaeI CATG 7 cut(s) 161, 446, 1145, 1186, 1234, 1277, 1345
FaqI GGGAC 2 cut(s) 839, 1212
FatI CATG 7 cut(s) 157, 442, 1141, 1182, 1230, 1273, 1341
FauI CCCGC 2 cut(s) 694, 1031
FauNDI CATATG 1 cut(s) 924
FblI GTMKAC 1 cut(s) 377
Fnu4HI GCNGC 9 cut(s) 80, 109, 112, 351, 602, 644, 1228, 1377, 1416
FokI GGATG 4 cut(s) 383, 430, 673, 766
FriOI GRGCYC 2 cut(s) 1079, 1327
Fsp4HI GCNGC 9 cut(s) 80, 109, 112, 351, 602, 644, 1228, 1377, 1416
FspBI CTAG 6 cut(s) 66, 152, 197, 408, 791, 981
GlaI GCGC 8 cut(s) 83, 234, 406, 547, 549, 551, 642, 789
GluI GCNGC 9 cut(s) 80, 109, 112, 351, 602, 644, 1228, 1377, 1416
HaeII RGCGCY 1 cut(s) 85
HaeIII GGCC 2 cut(s) 809, 1164
HapII CCGG 4 cut(s) 317, 368, 625, 665
HgaI GACGC 2 cut(s) 1195, 1319
HhaI GCGC 8 cut(s) 84, 235, 407, 548, 550, 552, 643, 790
Hin1II CATG 7 cut(s) 161, 446, 1145, 1186, 1234, 1277, 1345
Hin6I GCGC 8 cut(s) 82, 233, 405, 546, 548, 550, 641, 788
HinP1I GCGC 8 cut(s) 82, 233, 405, 546, 548, 550, 641, 788
HincII GTYRAC 1 cut(s) 1389
HindII GTYRAC 1 cut(s) 1389
HindIII AAGCTT 1 cut(s) 732
HinfI GANTC 4 cut(s) 162, 259, 834, 1200
HpaI GTTAAC 1 cut(s) 1389
HpaII CCGG 4 cut(s) 317, 368, 625, 665
HphI GGTGA 2 cut(s) 157, 910
Hpy166II GTNNAC 5 cut(s) 378, 687, 850, 1002, 1389
Hpy188I TCNGA 9 cut(s) 122, 129, 264, 293, 489, 714, 839, 1081, 1360
Hpy188III TCNNGA 3 cut(s) 224, 247, 1183
Hpy8I GTNNAC 5 cut(s) 378, 687, 850, 1002, 1389
Hpy99I CGWCG 1 cut(s) 358
HpyAV CCTTC 4 cut(s) 191, 316, 754, 834
HpyCH4III ACNGT 5 cut(s) 118, 274, 438, 994, 1393
HpyCH4IV ACGT 3 cut(s) 207, 380, 858
HpyF10VI GCNNNNNNNGC 4 cut(s) 707, 794, 1300, 1373
HpyF3I CTNAG 7 cut(s) 189, 236, 711, 816, 885, 1073, 1359
HpySE526I ACGT 3 cut(s) 207, 380, 858
Hsp92II CATG 7 cut(s) 161, 446, 1145, 1186, 1234, 1277, 1345
HspAI GCGC 8 cut(s) 82, 233, 405, 546, 548, 550, 641, 788
KspAI GTTAAC 1 cut(s) 1389
Kzo9I GATC 1 cut(s) 1237
LguI GCTCTTC 1 cut(s) 1056
LmnI GCTCC 4 cut(s) 621, 987, 1300, 1322
Lsp1109I GCAGC 7 cut(s) 91, 95, 123, 588, 1214, 1388, 1402
LweI GCATC 5 cut(s) 651, 966, 1017, 1059, 1376
MabI ACCWGGT 1 cut(s) 780
MaeI CTAG 6 cut(s) 66, 152, 197, 408, 791, 981
MaeII ACGT 3 cut(s) 207, 380, 858
MaeIII GTNAC 1 cut(s) 898
MalI GATC 1 cut(s) 1239
MboI GATC 1 cut(s) 1237
MboII GAAGA 3 cut(s) 875, 1043, 1179
MfeI CAATTG 1 cut(s) 1064
MhlI GDGCHC 6 cut(s) 712, 992, 1079, 1221, 1327, 1434
MluCI AATT 4 cut(s) 135, 1064, 1107, 1354
MlyI GAGTC 2 cut(s) 268, 1194
MmeI TCCRAC 1 cut(s) 572
MroXI GAANNNNTTC 1 cut(s) 1050
MseI TTAA 5 cut(s) 29, 42, 1244, 1262, 1388
MslI CAYNNNNRTG 1 cut(s) 923
MspI CCGG 4 cut(s) 317, 368, 625, 665
MspR9I CCNGG 3 cut(s) 318, 626, 782
MunI CAATTG 1 cut(s) 1064
MvaI CCWGG 1 cut(s) 782
MvnI CGCG 5 cut(s) 548, 550, 643, 892, 1038
MwoI GCNNNNNNNGC 4 cut(s) 707, 794, 1300, 1373
NciI CCSGG 2 cut(s) 318, 626
NcoI CCATGG 1 cut(s) 157
NdeI CATATG 1 cut(s) 924
NdeII GATC 1 cut(s) 1237
NlaIII CATG 7 cut(s) 161, 446, 1145, 1186, 1234, 1277, 1345
NlaIV GGNNCC 4 cut(s) 281, 623, 774, 1302
NmeAIII GCCGAG 1 cut(s) 1311
NmuCI GTSAC 1 cut(s) 898
NspI RCATGY 1 cut(s) 1345
PaeI GCATGC 1 cut(s) 1345
PagI TCATGA 1 cut(s) 1182
PaqCI CACCTGC 1 cut(s) 503
PauI GCGCGC 2 cut(s) 546, 548
PciSI GCTCTTC 1 cut(s) 1056
PdmI GAANNNNTTC 1 cut(s) 1050
PfeI GAWTC 2 cut(s) 162, 834
PkrI GCNGC 9 cut(s) 81, 110, 113, 352, 603, 645, 1229, 1378, 1417
PleI GAGTC 2 cut(s) 267, 1194
PpsI GAGTC 2 cut(s) 267, 1194
Ppu21I YACGTR 2 cut(s) 208, 381
Psp124BI GAGCTC 2 cut(s) 1079, 1327
Psp6I CCWGG 1 cut(s) 780
PspGI CCWGG 1 cut(s) 780
PspN4I GGNNCC 4 cut(s) 281, 623, 774, 1302
PspPI GGNCC 2 cut(s) 1002, 1162
PstI CTGCAG 2 cut(s) 113, 1420
PteI GCGCGC 2 cut(s) 546, 548
RsaI GTAC 6 cut(s) 206, 268, 857, 908, 929, 1278
RsaNI GTAC 6 cut(s) 205, 267, 856, 907, 928, 1277
RseI CAYNNNNRTG 1 cut(s) 923
SacI GAGCTC 2 cut(s) 1079, 1327
SapI GCTCTTC 1 cut(s) 1056
SaqAI TTAA 5 cut(s) 29, 42, 1244, 1262, 1388
SatI GCNGC 9 cut(s) 80, 109, 112, 351, 602, 644, 1228, 1377, 1416
Sau3AI GATC 1 cut(s) 1237
Sau96I GGNCC 2 cut(s) 1002, 1162
ScaI AGTACT 1 cut(s) 268
SchI GAGTC 2 cut(s) 268, 1194
ScrFI CCNGG 3 cut(s) 318, 626, 782
SduI GDGCHC 6 cut(s) 712, 992, 1079, 1221, 1327, 1434
SexAI ACCWGGT 1 cut(s) 780
SfaNI GCATC 5 cut(s) 651, 966, 1017, 1059, 1376
SfcI CTRYAG 3 cut(s) 109, 1135, 1416
SinI GGWCC 1 cut(s) 1002
SmiMI CAYNNNNRTG 1 cut(s) 923
SmlI CTYRAG 1 cut(s) 829
SmoI CTYRAG 1 cut(s) 829
SnaBI TACGTA 2 cut(s) 208, 381
SpeI ACTAGT 1 cut(s) 151
SphI GCATGC 1 cut(s) 1345
Sse9I AATT 4 cut(s) 135, 1064, 1107, 1354
SsiI CCGC 9 cut(s) 326, 350, 643, 701, 751, 797, 892, 1038, 1335
SspMI CTAG 6 cut(s) 66, 152, 197, 408, 791, 981
SstI GAGCTC 2 cut(s) 1079, 1327
StyD4I CCNGG 3 cut(s) 316, 624, 780
StyI CCWWGG 3 cut(s) 157, 1117, 1208
TaaI ACNGT 5 cut(s) 118, 274, 438, 994, 1393
TaiI ACGT 3 cut(s) 210, 383, 861
TaqI TCGA 3 cut(s) 1203, 1236, 1439
TasI AATT 4 cut(s) 135, 1064, 1107, 1354
TatI WGTACW 3 cut(s) 266, 906, 1276
TauI GCSGC 2 cut(s) 353, 646
TfiI GAWTC 2 cut(s) 162, 834
Tru1I TTAA 5 cut(s) 29, 42, 1244, 1262, 1388
Tru9I TTAA 5 cut(s) 29, 42, 1244, 1262, 1388
TscAI CASTG 2 cut(s) 857, 997
TseFI GTSAC 1 cut(s) 898
TseI GCWGC 7 cut(s) 79, 108, 111, 601, 1227, 1376, 1415
Tsp45I GTSAC 1 cut(s) 898
TspDTI ATGAA 7 cut(s) 80, 128, 579, 966, 1119, 1171, 1281
TspGWI ACGGA 2 cut(s) 371, 1000
TspRI CASTG 2 cut(s) 857, 997
VpaK11BI GGWCC 1 cut(s) 1002
XapI RAATTY 2 cut(s) 135, 1354
XceI RCATGY 1 cut(s) 1345
XcmI CCANNNNNNNNNTGG 1 cut(s) 940
XmiI GTMKAC 1 cut(s) 377
XmnI GAANNNNTTC 1 cut(s) 1050
XspI CTAG 6 cut(s) 66, 152, 197, 408, 791, 981
ZrmI AGTACT 1 cut(s) 268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.