Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0006281

Physical Location & Seq

Genomic Coordinates Forward (+)

5465598 .. 5469792

Gene Structure 4195 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0071500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGTCGACCACCACCACCGACGGCCTTCCTCTTCACACCCACAAACACTCTCTTCGCACTCCCATCAACCGCCTCTTCGTTCTAATTTACTGCTGCGCCATCCTAGCCTTGCTCTATCACCACACACTCTCCCTCCTCCACTCCGCAACTCTAACCTCCTTCTTCATCACCCTCACCCTCCTCATCTCCGACTCCATCCTCGCTTTCTTGAACATCACCACGCAAGCTTTCCGAATGAAGCCCATCTACCGCAAAGAATACCCCGAAAACCTCAAAAGAGTTCTTCGAAAAGCCGACTTCCCGGCACTTGATGTGTTCATATGCACTGCGGATCCCTACAAGGAGCCTCCGATGAACGTCGTCAACACGGCGTTGTCGGTGATGGGTTATGATTATCCGACGGAGAAGGTGTCAGTGTATGTTTCCGACGACGGAGGATCGGCTCTAACTCTGTTTGCGTTCATGGAGGCTGCAAAGTTTGCAAGGCACTGGTTACCTTTCTGCAGGGAGAACAACATTGTGGAAAGGTGTCCAGAAGCTTTTTTCCAAATGGATTCCTCTAGGTTTTCTGAGGCTGAGGAAATTAAGATTATGTACCAAGGCATGAAAGTGAGGGTGGACAATGTAATCGAGAGAGGCAAAGTAGACAGTGAATACGTAACCGGTGAATGGGAAACTCAGGCTTTTAGCAAATGGACCGATGGATTTACCCGGCCAGATCATCCTACAGTCATTCAGGTTTTGGAGGACAGTAGCAAAGACAGAGATATCACAGATAATGTTATGCCAAACTTAATCTATGTCTCTAGAGAAAAAAGCAGAAAATCAGAACATAACTTTAAAGCTGGTGCCCTTAATGTCCTTATTCGAGTTTCAGCTGTCATGACCAATGCGCCAATAGTCTTAACCCAAGACTGTGACATGTACTCCAATGACCCACAAACGCCTTCTCGTGTGCTATGCTACTTATCGGATCCTAAACTTCGATCCAAATTAGGATATGTGCAGTTTCCGCAGCGATTTCGCGGAATCAACAAGAATGACATATATGGATGTGAACACAAGTGTTTGTTTGTGATTAATCCTGAGGGAATGGATGGGGTTTCGGGGCCAAATTATGTGGGAACAGGATGCTTTTTCAATAGGCGAGTTTTCTTCGGAGGTCCGTCACAGTTGTTATCACCTGAAATTCCTGAATTAGCACCAGATAATGTGGTGGACAAGCCCATTCAGTCTACTGAGGTCTTGGAGTTGGCACATTCTGTTGCGGCTTGCAATTATGAGAATAACACGGATTGGGGATGGAAGATTGGTGTAAGATACGGCTCTCTGGTGGAGGACTACTTCACTGGTTATCGTTTGCAATGTGAAGGATGGAAATCTGTATTCTGCAATCCTGCTAGGGCAGCATTTTATGGAGATGCCCCGATCAACCTTGTTGATGTGCTCAATCAAACCAAGCGATGGACCATAGGCCTCCTTGAGGTTGCTTTCTCTAAATATAGTCCAATTACGTTTGGCATTCGGTCCATGGGCCTTTTGATGGGCCTTTCATATGCTCACTATGCATTTTGGCCCTTTTGGTCAATTCCAATCACGGTTTATGCCTTCCTCCCCCAGCTAGCTCTCCTCAATGGAATCAACATCTTTCCCAAGGTCTCGGAGCCATGGTTTCTCTTGTACGTCTTCCTTTTCATTGGATCCTATATCAAAAACTGCCTAGACTTTGTGGTAGAAGGAGGAACATTCCCAAAGTGGTGGAATGACCAAAGAATGTGGATGGTTAGGGCACTCTCATCCTTCTTGTTTGGATCCATAGAGTACCTTCTCATGTCCTTGGGCATTTCCACCCATGGGTTCAATGTGACTAGCAAAGTCCTTGATGAAGACCAAAGCAAAAGATATGACCAAGGGATCTTTGAGTTTGGAGTGGCATCACCCATGTTTGTGCCTCTAACATCGGCTGCCATTGTCAACTTGGCTGCGTTTGCTTGGGGACATGTAGAGGCTTTCAAAGGCAGCAATGGCTTGGAGGGGATGTTCTTGCAGATGTTTATAGCTGGTTTTGGCGTTGTGAATTGTATACCAATTTATGAAGCCATCATCAGTAGGAGTGACAAAGGGAGAATTCCTACAAAAACGACTATGGTTTCATTACTCTTAGCTTTTGCTCTTTATGTAGTGGCTTATGTTACTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF863

Protein Analysis

733

Amino Acids

82.89

Weight (kDa)

6.3

Isoelectric Point (pI)

36.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	103 - 387	3.7e-83	Cellulose synthase
Cellulose_synt	PF03552	405 - 727	8.5e-57	Cellulose synthase
Glyco_trans_2_3	PF13632	441 - 536	1.5e-08	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12120 AT1G62530 AT1G62530
fragaria_vesca	FvH4_5g00200 FvH4_5g00200 FvH4_5g00200 FvH4_5g00200 FvH4_5g00200 FvH4_5g00200 FvH4_5g00200
malus_domestica	MD04G1085400.v1.1 MD06G1062900.v1.1
prunus_persica	Prupe.5G074300_v2.0.a1
pyrus_communis	pycom04g07660 pycom06g06040 pycom06g06050
rosa_chinensis	RchiOBHm_Chr7g0202661
rosa_laevigata	RLG00000003583
rosa_multiflora	Rmu_sc0002365.1_g000023
rosa_roxburghii	Rroxscaffold_3G00254430
rosa_rugosa	Rorug07G0071500 Rorug07G0071600
rosa_samantha	Rh7AG199500 Rh7BG200300 Rh7CG211000 Rh7DG206400
rosa_wichuraiana	Rw7G017470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	848
AccB7I	CCANNNNNTGG	1 cut(s)	1464
AccI	GTMKAC	4 cut(s)	5, 645, 1235, 2083
AccII	CGCG	1 cut(s)	1026
AciI	CCGC	7 cut(s)	70, 144, 250, 329, 1013, 1026, 1268
AcoI	YGGCCR	1 cut(s)	713
AcsI	RAATTY	2 cut(s)	1188, 2127
AfaI	GTAC	4 cut(s)	596, 926, 1682, 1823
AfiI	CCNNNNNNNGG	5 cut(s)	669, 1464, 1483, 1543, 1854
AflIII	ACRYGT	2 cut(s)	921, 1999
AgeI	ACCGGT	1 cut(s)	662
AgsI	TTSAA	4 cut(s)	211, 1141, 1861, 2014
AloI	GAACNNNNNNTCC	2 cut(s)	2024, 2056
AluBI	AGCT	8 cut(s)	227, 539, 845, 878, 1621, 1625, 2060, 2165
AluI	AGCT	8 cut(s)	227, 539, 845, 878, 1621, 1625, 2060, 2165
Alw21I	GWGCWC	1 cut(s)	1449
Alw26I	GTCTC	2 cut(s)	808, 1663
AoxI	GGCC	7 cut(s)	22, 713, 1109, 1474, 1534, 1546, 1574
ApeKI	GCWGC	7 cut(s)	93, 470, 1015, 1406, 1964, 1982, 2019
ApoI	RAATTY	2 cut(s)	1188, 2127
AseI	ATTAAT	1 cut(s)	1080
AsiGI	ACCGGT	1 cut(s)	662
AspLEI	GCGC	2 cut(s)	98, 895
AspS9I	GGNCC	8 cut(s)	696, 1109, 1163, 1467, 1527, 1534, 1546, 1575
AsuC2I	CCSGG	2 cut(s)	302, 712
AsuHPI	GGTGA	8 cut(s)	110, 160, 166, 208, 391, 677, 1173, 1929
AsuII	TTCGAA	1 cut(s)	286
AsuNHI	GCTAGC	1 cut(s)	1621
AvaII	GGWCC	4 cut(s)	696, 1163, 1467, 1527
AxyI	CCTNAGG	1 cut(s)	1086
BaeGI	GKGCMC	2 cut(s)	853, 1792
BamHI	GGATCC	4 cut(s)	331, 973, 1700, 1811
BanI	GGYRCC	1 cut(s)	848
BarI	GAAGNNNNNNTAC	2 cut(s)	230, 262
BauI	CACGAG	1 cut(s)	951
BbsI	GAAGAC	2 cut(s)	1678, 1893
Bbv12I	GWGCWC	1 cut(s)	1449
BbvCI	CCTCAGC	1 cut(s)	576
BbvI	GCAGC	7 cut(s)	80, 457, 1027, 1418, 1951, 1969, 2031
BceAI	ACGGC	3 cut(s)	37, 384, 1339
BcgI	CGANNNNNNTGC	2 cut(s)	1004, 1038
BcnI	CCSGG	2 cut(s)	302, 712
BcoDI	GTCTC	2 cut(s)	808, 1663
BfaI	CTAG	7 cut(s)	104, 561, 807, 1401, 1622, 1721, 1869
BfmI	CTRYAG	2 cut(s)	502, 726
BisI	GCNGC	8 cut(s)	94, 471, 1016, 1269, 1407, 1965, 1983, 2020
BlsI	GCNGC	8 cut(s)	95, 472, 1017, 1270, 1408, 1966, 1984, 2021
Bme1390I	CCNGG	2 cut(s)	302, 712
Bme18I	GGWCC	4 cut(s)	696, 1163, 1467, 1527
BmgT120I	GGNCC	8 cut(s)	696, 1109, 1163, 1467, 1527, 1534, 1546, 1575
BmiI	GGNNCC	8 cut(s)	333, 345, 850, 975, 1110, 1665, 1702, 1813
BmrFI	CCNGG	2 cut(s)	302, 712
BmsI	GCATC	3 cut(s)	1121, 1411, 1943
BmtI	GCTAGC	1 cut(s)	1625
BpiI	GAAGAC	2 cut(s)	1678, 1893
Bpu10I	CCTNAGC	1 cut(s)	576
Bpu14I	TTCGAA	1 cut(s)	286
BpuEI	CTTGAG	1 cut(s)	1502
BpuMI	CCSGG	2 cut(s)	302, 712
BsaAI	YACGTR	1 cut(s)	658
BsaBI	GATNNNNATC	1 cut(s)	1378
BsaI	GGTCTC	1 cut(s)	1663
BsaJI	CCNNGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
BsaWI	WCCGGW	1 cut(s)	662
Bsc4I	CCNNNNNNNGG	5 cut(s)	669, 1464, 1483, 1543, 1854
Bse118I	RCCGGY	1 cut(s)	662
Bse1I	ACTGG	2 cut(s)	494, 1354
Bse21I	CCTNAGG	1 cut(s)	1086
Bse3DI	GCAATG	2 cut(s)	1370, 2029
Bse8I	GATNNNNATC	1 cut(s)	1378
BseDI	CCNNGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
BseJI	GATNNNNATC	1 cut(s)	1378
BseLI	CCNNNNNNNGG	5 cut(s)	669, 1464, 1483, 1543, 1854
BseMI	GCAATG	2 cut(s)	1370, 2029
BseMII	CTCAG	5 cut(s)	561, 567, 692, 1077, 1230
BseNI	ACTGG	2 cut(s)	494, 1354
BseRI	GAGGAG	3 cut(s)	125, 170, 1619
BseSI	GKGCMC	2 cut(s)	853, 1792
BseXI	GCAGC	7 cut(s)	80, 457, 1027, 1418, 1951, 1969, 2031
BseYI	CCCAGC	1 cut(s)	1617
BsgI	GTGCAG	1 cut(s)	1025
Bsh1236I	CGCG	1 cut(s)	1026
BshFI	GGCC	7 cut(s)	24, 715, 1111, 1476, 1536, 1548, 1576
BshNI	GGYRCC	1 cut(s)	848
BshTI	ACCGGT	1 cut(s)	662
BsiHKAI	GWGCWC	1 cut(s)	1449
BsiSI	CCGG	3 cut(s)	302, 663, 712
BslFI	GGGAC	1 cut(s)	2010
BslI	CCNNNNNNNGG	5 cut(s)	669, 1464, 1483, 1543, 1854
BsmAI	GTCTC	2 cut(s)	808, 1663
BsmFI	GGGAC	1 cut(s)	2010
BsmI	GAATGC	1 cut(s)	1521
BsnI	GGCC	7 cut(s)	24, 715, 1111, 1476, 1536, 1548, 1576
Bso31I	GGTCTC	1 cut(s)	1663
Bsp119I	TTCGAA	1 cut(s)	286
Bsp1286I	GDGCHC	3 cut(s)	853, 1449, 1792
Bsp143I	GATC	9 cut(s)	331, 437, 718, 973, 986, 1428, 1700, 1811, 1914
Bsp19I	CCATGG	3 cut(s)	1530, 1667, 1852
BspACI	CCGC	7 cut(s)	70, 144, 250, 329, 1013, 1026, 1268
BspANI	GGCC	7 cut(s)	24, 715, 1111, 1476, 1536, 1548, 1576
BspCNI	CTCAG	5 cut(s)	562, 568, 691, 1078, 1231
BspFNI	CGCG	1 cut(s)	1026
BspHI	TCATGA	1 cut(s)	882
BspLI	GGNNCC	8 cut(s)	333, 345, 850, 975, 1110, 1665, 1702, 1813
BspMAI	CTGCAG	1 cut(s)	506
BspOI	GCTAGC	1 cut(s)	1625
BspT104I	TTCGAA	1 cut(s)	286
BspT107I	GGYRCC	1 cut(s)	848
BspTNI	GGTCTC	1 cut(s)	1663
BsrDI	GCAATG	2 cut(s)	1370, 2029
BsrFI	RCCGGY	1 cut(s)	662
BsrI	ACTGG	2 cut(s)	494, 1354
BssAI	RCCGGY	1 cut(s)	662
BssECI	CCNNGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
BssMI	GATC	9 cut(s)	331, 437, 718, 973, 986, 1428, 1700, 1811, 1914
BssNAI	GTATAC	1 cut(s)	2084
BssSI	CACGAG	1 cut(s)	951
BssT1I	CCWWGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
Bst1107I	GTATAC	1 cut(s)	2084
Bst2BI	CACGAG	1 cut(s)	951
Bst4CI	ACNGT	6 cut(s)	650, 730, 752, 917, 1173, 1600
Bst6I	CTCTTC	3 cut(s)	36, 57, 80
BstAPI	GCANNNNNTGC	1 cut(s)	479
BstBAI	YACGTR	1 cut(s)	658
BstBI	TTCGAA	1 cut(s)	286
BstC8I	GCNNGC	3 cut(s)	225, 1273, 1623
BstDEI	CTNAG	6 cut(s)	570, 576, 678, 1086, 1239, 2161
BstDSI	CCRYGG	3 cut(s)	1530, 1667, 1852
BstEII	GGTNACC	1 cut(s)	492
BstENI	CCTNNNNNAGG	1 cut(s)	1481
BstFNI	CGCG	1 cut(s)	1026
BstHHI	GCGC	2 cut(s)	98, 895
BstKTI	GATC	9 cut(s)	334, 440, 721, 976, 989, 1431, 1703, 1814, 1917
BstMAI	GTCTC	2 cut(s)	808, 1663
BstMBI	GATC	9 cut(s)	331, 437, 718, 973, 986, 1428, 1700, 1811, 1914
BstMWI	GCNNNNNNNGC	7 cut(s)	104, 479, 1012, 1406, 1565, 1988, 2025
BstNSI	RCATGY	2 cut(s)	925, 2003
BstPI	GGTNACC	1 cut(s)	492
BstSCI	CCNGG	2 cut(s)	300, 710
BstSFI	CTRYAG	2 cut(s)	502, 726
BstSLI	GKGCMC	2 cut(s)	853, 1792
BstSNI	TACGTA	1 cut(s)	658
BstUI	CGCG	1 cut(s)	1026
BstV1I	GCAGC	7 cut(s)	80, 457, 1027, 1418, 1951, 1969, 2031
BstV2I	GAAGAC	2 cut(s)	1678, 1893
BstX2I	RGATCY	5 cut(s)	331, 973, 1700, 1811, 1914
BstXI	CCANNNNNNTGG	1 cut(s)	1758
BstYI	RGATCY	5 cut(s)	331, 973, 1700, 1811, 1914
BstZ17I	GTATAC	1 cut(s)	2084
Bsu36I	CCTNAGG	1 cut(s)	1086
BsuRI	GGCC	7 cut(s)	24, 715, 1111, 1476, 1536, 1548, 1576
BtgI	CCRYGG	3 cut(s)	1530, 1667, 1852
BtgZI	GCGATG	1 cut(s)	1477
BtsI	GCAGTG	1 cut(s)	324
BtsIMutI	CAGTG	5 cut(s)	324, 420, 487, 655, 1347
Cac8I	GCNNGC	3 cut(s)	225, 1273, 1623
CciI	TCATGA	1 cut(s)	882
CfoI	GCGC	2 cut(s)	98, 895
Cfr10I	RCCGGY	1 cut(s)	662
Cfr13I	GGNCC	8 cut(s)	696, 1109, 1163, 1467, 1527, 1534, 1546, 1575
Csp6I	GTAC	4 cut(s)	595, 925, 1681, 1822
CspAI	ACCGGT	1 cut(s)	662
CspCI	CAANNNNNGTGG	4 cut(s)	1101, 1136, 1757, 1792
CviQI	GTAC	4 cut(s)	595, 925, 1681, 1822
DdeI	CTNAG	6 cut(s)	570, 576, 678, 1086, 1239, 2161
DpnI	GATC	9 cut(s)	333, 439, 720, 975, 988, 1430, 1702, 1813, 1916
DpnII	GATC	9 cut(s)	331, 437, 718, 973, 986, 1428, 1700, 1811, 1914
DraI	TTTAAA	1 cut(s)	841
EaeI	YGGCCR	1 cut(s)	713
Eam1104I	CTCTTC	3 cut(s)	36, 57, 80
EarI	CTCTTC	3 cut(s)	36, 57, 80
Eco105I	TACGTA	1 cut(s)	658
Eco130I	CCWWGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
Eco147I	AGGCCT	1 cut(s)	1476
Eco31I	GGTCTC	1 cut(s)	1663
Eco32I	GATATC	1 cut(s)	769
Eco47I	GGWCC	4 cut(s)	696, 1163, 1467, 1527
Eco81I	CCTNAGG	1 cut(s)	1086
Eco91I	GGTNACC	1 cut(s)	492
EcoNI	CCTNNNNNAGG	1 cut(s)	1481
EcoO65I	GGTNACC	1 cut(s)	492
EcoRI	GAATTC	1 cut(s)	2127
EcoRV	GATATC	1 cut(s)	769
EcoT14I	CCWWGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
EcoT22I	ATGCAT	1 cut(s)	1570
ErhI	CCWWGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
FaqI	GGGAC	1 cut(s)	2010
FauNDI	CATATG	2 cut(s)	320, 1555
FblI	GTMKAC	4 cut(s)	5, 645, 1235, 2083
Fnu4HI	GCNGC	8 cut(s)	94, 471, 1016, 1269, 1407, 1965, 1983, 2020
Fsp4HI	GCNGC	8 cut(s)	94, 471, 1016, 1269, 1407, 1965, 1983, 2020
FspBI	CTAG	7 cut(s)	104, 561, 807, 1401, 1622, 1721, 1869
GlaI	GCGC	2 cut(s)	97, 894
GluI	GCNGC	8 cut(s)	94, 471, 1016, 1269, 1407, 1965, 1983, 2020
GsaI	CCCAGC	1 cut(s)	1621
HaeIII	GGCC	7 cut(s)	24, 715, 1111, 1476, 1536, 1548, 1576
HapII	CCGG	3 cut(s)	302, 663, 712
HhaI	GCGC	2 cut(s)	98, 895
Hin6I	GCGC	2 cut(s)	96, 893
HinP1I	GCGC	2 cut(s)	96, 893
HincII	GTYRAC	3 cut(s)	6, 364, 1975
HindII	GTYRAC	3 cut(s)	6, 364, 1975
HindIII	AAGCTT	2 cut(s)	225, 537
HinfI	GANTC	4 cut(s)	191, 554, 1029, 1638
HpaII	CCGG	3 cut(s)	302, 663, 712
HphI	GGTGA	8 cut(s)	110, 160, 166, 208, 391, 677, 1173, 1929
Hpy166II	GTNNAC	9 cut(s)	6, 364, 619, 646, 1058, 1219, 1236, 1975, 2084
Hpy188III	TCNNGA	7 cut(s)	208, 533, 631, 807, 883, 1085, 1193
Hpy8I	GTNNAC	9 cut(s)	6, 364, 619, 646, 1058, 1219, 1236, 1975, 2084
Hpy99I	CGWCG	5 cut(s)	23, 362, 403, 431, 434
HpyAV	CCTTC	9 cut(s)	35, 169, 400, 957, 1364, 1618, 1730, 1810, 1835
HpyCH4III	ACNGT	6 cut(s)	650, 730, 752, 917, 1173, 1600
HpyCH4IV	ACGT	4 cut(s)	357, 657, 1514, 1683
HpyF10VI	GCNNNNNNNGC	7 cut(s)	104, 479, 1012, 1406, 1565, 1988, 2025
HpyF3I	CTNAG	6 cut(s)	570, 576, 678, 1086, 1239, 2161
HpySE526I	ACGT	4 cut(s)	357, 657, 1514, 1683
HspAI	GCGC	2 cut(s)	96, 893
Kzo9I	GATC	9 cut(s)	331, 437, 718, 973, 986, 1428, 1700, 1811, 1914
LmnI	GCTCC	2 cut(s)	343, 1663
Lsp1109I	GCAGC	7 cut(s)	80, 457, 1027, 1418, 1951, 1969, 2031
LweI	GCATC	3 cut(s)	1121, 1411, 1943
MaeI	CTAG	7 cut(s)	104, 561, 807, 1401, 1622, 1721, 1869
MaeII	ACGT	4 cut(s)	357, 657, 1514, 1683
MaeIII	GTNAC	7 cut(s)	492, 658, 917, 1167, 1864, 2114, 2191
MalI	GATC	9 cut(s)	333, 439, 720, 975, 988, 1430, 1702, 1813, 1916
MboI	GATC	9 cut(s)	331, 437, 718, 973, 986, 1428, 1700, 1811, 1914
MboII	GAAGA	9 cut(s)	23, 44, 67, 154, 275, 1147, 1318, 1678, 1898
MflI	RGATCY	5 cut(s)	331, 973, 1700, 1811, 1914
MhlI	GDGCHC	3 cut(s)	853, 1449, 1792
MlyI	GAGTC	1 cut(s)	185
MmeI	TCCRAC	3 cut(s)	213, 422, 450
Mph1103I	ATGCAT	1 cut(s)	1570
MseI	TTAA	7 cut(s)	585, 794, 840, 855, 905, 1080, 2200
MslI	CAYNNNNRTG	2 cut(s)	608, 1946
MspA1I	CMGCKG	1 cut(s)	878
MspI	CCGG	3 cut(s)	302, 663, 712
MspR9I	CCNGG	2 cut(s)	302, 712
Mva1269I	GAATGC	1 cut(s)	1521
MvnI	CGCG	1 cut(s)	1026
MwoI	GCNNNNNNNGC	7 cut(s)	104, 479, 1012, 1406, 1565, 1988, 2025
NciI	CCSGG	2 cut(s)	302, 712
NcoI	CCATGG	3 cut(s)	1530, 1667, 1852
NdeI	CATATG	2 cut(s)	320, 1555
NdeII	GATC	9 cut(s)	331, 437, 718, 973, 986, 1428, 1700, 1811, 1914
NheI	GCTAGC	1 cut(s)	1621
NlaIV	GGNNCC	8 cut(s)	333, 345, 850, 975, 1110, 1665, 1702, 1813
NmuCI	GTSAC	4 cut(s)	917, 1167, 1864, 2114
NsiI	ATGCAT	1 cut(s)	1570
NspI	RCATGY	2 cut(s)	925, 2003
NspV	TTCGAA	1 cut(s)	286
PagI	TCATGA	1 cut(s)	882
PceI	AGGCCT	1 cut(s)	1476
PciI	ACATGT	2 cut(s)	921, 1999
PctI	GAATGC	1 cut(s)	1521
PfeI	GAWTC	3 cut(s)	554, 1029, 1638
PflMI	CCANNNNNTGG	1 cut(s)	1464
PinAI	ACCGGT	1 cut(s)	662
PkrI	GCNGC	8 cut(s)	95, 472, 1017, 1270, 1408, 1966, 1984, 2021
PleI	GAGTC	1 cut(s)	185
PpsI	GAGTC	1 cut(s)	185
Ppu21I	YACGTR	1 cut(s)	658
PscI	ACATGT	2 cut(s)	921, 1999
PshBI	ATTAAT	1 cut(s)	1080
PspEI	GGTNACC	1 cut(s)	492
PspFI	CCCAGC	1 cut(s)	1617
PspN4I	GGNNCC	8 cut(s)	333, 345, 850, 975, 1110, 1665, 1702, 1813
PspPI	GGNCC	8 cut(s)	696, 1109, 1163, 1467, 1527, 1534, 1546, 1575
PstI	CTGCAG	1 cut(s)	506
PsuI	RGATCY	5 cut(s)	331, 973, 1700, 1811, 1914
PvuII	CAGCTG	1 cut(s)	878
RsaI	GTAC	4 cut(s)	596, 926, 1682, 1823
RsaNI	GTAC	4 cut(s)	595, 925, 1681, 1822
RseI	CAYNNNNRTG	2 cut(s)	608, 1946
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	7 cut(s)	585, 794, 840, 855, 905, 1080, 2200
SatI	GCNGC	8 cut(s)	94, 471, 1016, 1269, 1407, 1965, 1983, 2020
Sau3AI	GATC	9 cut(s)	331, 437, 718, 973, 986, 1428, 1700, 1811, 1914
Sau96I	GGNCC	8 cut(s)	696, 1109, 1163, 1467, 1527, 1534, 1546, 1575
SchI	GAGTC	1 cut(s)	185
ScrFI	CCNGG	2 cut(s)	302, 712
SduI	GDGCHC	3 cut(s)	853, 1449, 1792
SfaNI	GCATC	3 cut(s)	1121, 1411, 1943
SfcI	CTRYAG	2 cut(s)	502, 726
SfuI	TTCGAA	1 cut(s)	286
SinI	GGWCC	4 cut(s)	696, 1163, 1467, 1527
SmiMI	CAYNNNNRTG	2 cut(s)	608, 1946
SmlI	CTYRAG	1 cut(s)	1481
SmoI	CTYRAG	1 cut(s)	1481
SnaBI	TACGTA	1 cut(s)	658
SseBI	AGGCCT	1 cut(s)	1476
SsiI	CCGC	7 cut(s)	70, 144, 250, 329, 1013, 1026, 1268
SspMI	CTAG	7 cut(s)	104, 561, 807, 1401, 1622, 1721, 1869
StuI	AGGCCT	1 cut(s)	1476
StyD4I	CCNGG	2 cut(s)	300, 710
StyI	CCWWGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
TaaI	ACNGT	6 cut(s)	650, 730, 752, 917, 1173, 1600
TaiI	ACGT	4 cut(s)	360, 660, 1517, 1686
TaqI	TCGA	5 cut(s)	5, 286, 630, 868, 985
TaqII	GACCGA	2 cut(s)	713, 1515
TatI	WGTACW	1 cut(s)	924
TauI	GCSGC	1 cut(s)	1271
TfiI	GAWTC	3 cut(s)	554, 1029, 1638
Tru1I	TTAA	7 cut(s)	585, 794, 840, 855, 905, 1080, 2200
Tru9I	TTAA	7 cut(s)	585, 794, 840, 855, 905, 1080, 2200
TscAI	CASTG	5 cut(s)	331, 420, 494, 655, 1354
TseFI	GTSAC	4 cut(s)	917, 1167, 1864, 2114
TseI	GCWGC	7 cut(s)	93, 470, 1015, 1406, 1964, 1982, 2019
Tsp45I	GTSAC	4 cut(s)	917, 1167, 1864, 2114
TspGWI	ACGGA	4 cut(s)	416, 447, 1155, 1307
TspRI	CASTG	5 cut(s)	331, 420, 494, 655, 1354
Van91I	CCANNNNNTGG	1 cut(s)	1464
VpaK11BI	GGWCC	4 cut(s)	696, 1163, 1467, 1527
VspI	ATTAAT	1 cut(s)	1080
XagI	CCTNNNNNAGG	1 cut(s)	1481
XapI	RAATTY	2 cut(s)	1188, 2127
XbaI	TCTAGA	1 cut(s)	806
XceI	RCATGY	2 cut(s)	925, 2003
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1975
XmiI	GTMKAC	4 cut(s)	5, 645, 1235, 2083
XspI	CTAG	7 cut(s)	104, 561, 807, 1401, 1622, 1721, 1869
Zsp2I	ATGCAT	1 cut(s)	1570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.