Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0003225

Physical Location & Seq

Genomic Coordinates Reverse (-)

9374390 .. 9376828

Gene Structure 2439 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0119800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGATGATGATGATGATAAGTTCCATCTCGCCCTTACCTGCAGCTCCTCCTACTTCTGTTACGACACATACAAAGCCTATTGGCATCATCCCTCCTCCTCCAGAAACAGCAAAAATCATCAACAAAACTGCCAAGCACGTTTCCAGGAATGGACCGGAATTTGAGAAGAAGGTCATCACTGAAAAGACTAAACTAAATCCAGATCCAAAATTCGACTTTTTGAATTCCTCACATCCCTACCATGCATATTATCAGCACCGGGTGGCCGAATTCCGTGCCCAGCCTGATCAGTCTTCTGAAGAGCCAGCTCCGGTTGTAGATGTTGAAGCTGGAGCACCAAAGCCTGATTCCCTCTCCCAGCTTAGACCTGAATGCAAAGTGCCCGAACCACCAGAACCCGAAGAGTTTACTGTTCAGCTCCCTCAAGGAATTAGTGGAGAAGAACTGGATTTTATGAAGCTCACAGCCCAGTTTGTAGCTCGGAATGGGAAATCGTTTTTGACAGAATTGAGAAGCAGAGAGAGTAAAAACCCCCAGTTCTATTTTCTCGATCATAAACATAGCTTGTTCAAGTTTTTTACTTCTCTGGCGGATGCATATTCAAAGGTATTGATGCCACAAGAAGGGATGACAGAGAAACTGAAGAAGAACACGGCGGACATGACCATCGTGCTAGAACGGTGTGTGCATCGGCTGGAGTGGGAGCATTATCAAAAGCAGGCAAAGCAGAAGACTGAAGATGAGATTGAGCAGGACAGGTTACAAATGGCTGCAATTGATTGGCACGATAATGTCTTGGTCGAAGTCATAGACTTTGATGATGTTGAGGATGACTATTTACCTCCTCCGCTGAGCCTTGAAGAGGTTATAAGTAGGAGCAAAGTTGTTATGGAAGCAGATGATAATGTCGAGGAGCATAGGGATGTTGAAATGGAGTTGGATGAAGAAGAGATGCAGCTTGTTGAAGAAGGCATGAAAGTAACAGAGGTGGAACAAGCACCAATGAGAATTGTGAAGAACTGGAAGAGACCCGAGGAGAGGATGATCCAATCCAGTGCCGAAAGAGACATGACGATTTCCCCCATTACCGGGGAGCTTGTCCCTAACAATGAGATGTCTGAGCACATGAGGATTTCCCTCATTGATCCAAGATACAGAGAACAGAAAGAAAGGATGTTTGCTAAGATTCGGGAGACTAGTCTTGTTCTTGCTCAGGACGATGAGATCTCAAGAAACATTGTGAACCTTGCGAGAACCCGTCCTGACATTTTTGGTTCCACAGAGGAGGAAGTTTCCAATGCTGTTAAGGCTGAGATTGGAAAGCAGGAAAAGCAGCAGGTCATATGGGATGGTCATGCTGGAAGCACTGGCCGTGCAGCAAATCCAGCCATGTCACAGAATGCCAATGGAGATGATAAAACTGATGTTGTGAACAATGAGGCAAGGAACCTTCCTGGTCCGGCGAGACCTTCAGTTCTTCCTCTTCCACCACCTGGTGTTCTTGCCGTTAATCTTCCTAGTGTTCCTGCAAACACAGTTCAGTACGCAGGTACAAATAGCAGTGATTTCCCTGTCCAATTTCCATTGGTTAAGACTACTATGCCTCCGTCAATGTTTATGTCTGCAGCTAGTATACCTGTACCTCCTCCACCTGTATCTGAGTTTACAACCATGCAAATGGCTTACATACCTACAAACACAATGCCGATGCCTCCACCGCCTTTGCCTCATGTGCGGCCACCAACACCTCCGCATGCAGAACCTAAGCCAAAGCGACAGAAGCTTGATGATTCAATGCTTATTCCAGAAGATAAATTTCTGGCACAGCACCCGGGACCGGTTGGCATCAATATATCTGTTCCCAATGTTGATGAAGGTAACCTCAAGGGACAACTTTTGGAGATCACAGTGCAGTCTTTATCTGAAACTGTTGGCAGTCTGAAAGAGAAAATTTCTGGGGAAATCCAGCTTCCGGCAAACAAACAGAAATTGAGTGGAAATTCGGGATTTCTGAAAGACAATTTGTCCCTTGCATATTACAATGTAGGCGCAGGACAAACACTTGCTCTTTCAATAAGAGAGCGTGGTGGAAGAAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vma12

Protein Analysis

700

Amino Acids

78.33

Weight (kDa)

5.24

Isoelectric Point (pI)

54.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	38 - 91	2.5e-18	Surp module
Surp	PF01805	149 - 200	8.5e-17	Surp module
PRP21_like_P	PF12230	220 - 418	9.7e-48	Pre-mRNA splicing factor PRP21 like protein
ubiquitin	PF00240	629 - 695	1.1e-08	Ubiquitin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52980 AT5G52980
fragaria_vesca	FvH4_5g22440 FvH4_5g22440
malus_domestica	MD06G1036800.v1.1
prunus_persica	Prupe.5G032500_v2.0.a1 Prupe.5G032500_v2.0.a1 Prupe.5G032500_v2.0.a1 Prupe.5G032500_v2.0.a1 Prupe.5G032500_v2.0.a1 Prupe.5G032500_v2.0.a1 Prupe.5G032500_v2.0.a1 Prupe.5G032500_v2.0.a1 Prupe.5G032500_v2.0.a1 Prupe.5G032500_v2.0.a1 Prupe.5G032500_v2.0.a1
pyrus_communis	pycom06g03010
rosa_chinensis	RchiOBHm_Chr7g0210201 RchiOBHm_Chr7g0210231
rosa_laevigata	RLG00000003057
rosa_multiflora	Rmu_sc0005438.1_g000010 Rmu_sc0006908.1_g000007 Rmu_sc0019437.1_g000003
rosa_roxburghii	Rroxscaffold_3G00248540
rosa_rugosa	Rorug07G0119300 Rorug07G0119400 Rorug07G0119500 Rorug07G0119600 Rorug07G0119700 Rorug07G0119800
rosa_samantha	Rh1AG349500 Rh7AG252700 Rh7BG247800 Rh7CG269700 Rh7DG260300
rosa_wichuraiana	Rw1G031130 Rw7G021490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	869
Acc36I	ACCTGC	3 cut(s)	46, 1327, 1538
AccB7I	CCANNNNNTGG	1 cut(s)	1493
AccI	GTMKAC	1 cut(s)	1633
AciI	CCGC	6 cut(s)	590, 656, 848, 1718, 1735, 1751
AclWI	GGATC	3 cut(s)	197, 1039, 1139
AcoI	YGGCCR	3 cut(s)	264, 1369, 1736
AcsI	RAATTY	7 cut(s)	158, 209, 223, 269, 1814, 1950, 1999
AcuI	CTGAAG	4 cut(s)	318, 662, 756, 1455
AdeI	CACNNNGTG	2 cut(s)	262, 1496
AfaI	GTAC	3 cut(s)	1544, 1552, 1641
AfiI	CCNNNNNNNGG	8 cut(s)	623, 862, 1038, 1088, 1089, 1493, 1837, 1972
AgeI	ACCGGT	1 cut(s)	1837
AgsI	TTSAA	9 cut(s)	223, 326, 571, 603, 860, 929, 965, 1794, 2073
AhdI	GACNNNNNGTC	1 cut(s)	2023
AhlI	ACTAGT	1 cut(s)	1196
AjnI	CCWGG	3 cut(s)	143, 1453, 1492
AjuI	GAANNNNNNNTTGG	2 cut(s)	331, 363
Alw21I	GWGCWC	2 cut(s)	337, 1125
Alw26I	GTCTC	4 cut(s)	1021, 1059, 1187, 1459
AlwI	GGATC	3 cut(s)	197, 1039, 1139
Ama87I	CYCGRG	2 cut(s)	1031, 1831
AoxI	GGCC	3 cut(s)	264, 1369, 1736
ApeKI	GCWGC	6 cut(s)	41, 770, 955, 1333, 1376, 1625
ApoI	RAATTY	7 cut(s)	158, 209, 223, 269, 1814, 1950, 1999
AsiGI	ACCGGT	1 cut(s)	1837
AspLEI	GCGC	1 cut(s)	2051
AspS9I	GGNCC	3 cut(s)	152, 1457, 1835
AsuC2I	CCSGG	4 cut(s)	260, 1090, 1832, 1833
AvaI	CYCGRG	2 cut(s)	1031, 1831
AvaII	GGWCC	3 cut(s)	152, 1457, 1835
BaeGI	GKGCMC	2 cut(s)	280, 384
BbsI	GAAGAC	2 cut(s)	285, 737
Bbv12I	GWGCWC	2 cut(s)	337, 1125
BbvI	GCAGC	6 cut(s)	53, 757, 967, 1345, 1388, 1637
BccI	CCATC	3 cut(s)	32, 674, 1343
BceAI	ACGGC	3 cut(s)	669, 1356, 1490
BcgI	CGANNNNNNTGC	2 cut(s)	257, 291
BciT130I	CCWGG	3 cut(s)	145, 1455, 1494
BclI	TGATCA	1 cut(s)	286
BcnI	CCSGG	4 cut(s)	260, 1090, 1832, 1833
BcoDI	GTCTC	4 cut(s)	1021, 1059, 1187, 1459
BcuI	ACTAGT	1 cut(s)	1196
BfaI	CTAG	4 cut(s)	674, 1197, 1518, 1629
BfmI	CTRYAG	2 cut(s)	39, 1623
BfuAI	ACCTGC	3 cut(s)	46, 1327, 1538
BglII	AGATCT	1 cut(s)	1224
BisI	GCNGC	7 cut(s)	42, 771, 956, 1334, 1377, 1626, 1736
BlpI	GCTNAGC	1 cut(s)	851
BlsI	GCNGC	7 cut(s)	43, 772, 957, 1335, 1378, 1627, 1737
Bme1390I	CCNGG	7 cut(s)	145, 260, 1090, 1455, 1494, 1832, 1833
Bme18I	GGWCC	3 cut(s)	152, 1457, 1835
BmeRI	GACNNNNNGTC	1 cut(s)	2023
BmeT110I	CYCGRG	2 cut(s)	1031, 1831
BmgT120I	GGNCC	3 cut(s)	152, 1457, 1835
BmiI	GGNNCC	3 cut(s)	1276, 1448, 1836
BmrFI	CCNGG	7 cut(s)	145, 260, 1090, 1455, 1494, 1832, 1833
BmrI	ACTGGG	2 cut(s)	463, 529
BmsI	GCATC	7 cut(s)	93, 583, 603, 697, 942, 1698, 1854
BmuI	ACTGGG	2 cut(s)	463, 529
BpiI	GAAGAC	2 cut(s)	285, 737
BpmI	CTGGAG	3 cut(s)	84, 351, 716
Bpu10I	CCTNAGC	2 cut(s)	1212, 1764
Bpu1102I	GCTNAGC	1 cut(s)	851
BpuEI	CTTGAG	3 cut(s)	408, 1213, 1868
BpuMI	CCSGG	4 cut(s)	260, 1090, 1832, 1833
BsaI	GGTCTC	2 cut(s)	1021, 1459
BsaJI	CCNNGG	3 cut(s)	1032, 1089, 1831
BsaWI	WCCGGW	3 cut(s)	154, 310, 1837
BsaXI	ACNNNNNCTCC	2 cut(s)	1588, 1618
Bsc4I	CCNNNNNNNGG	8 cut(s)	623, 862, 1038, 1088, 1089, 1493, 1837, 1972
Bse118I	RCCGGY	1 cut(s)	1837
Bse1I	ACTGG	6 cut(s)	450, 469, 535, 1025, 1053, 1372
BseBI	CCWGG	3 cut(s)	145, 1455, 1494
BseDI	CCNNGG	3 cut(s)	1032, 1089, 1831
BseLI	CCNNNNNNNGG	8 cut(s)	623, 862, 1038, 1088, 1089, 1493, 1837, 1972
BseMII	CTCAG	5 cut(s)	842, 1110, 1226, 1302, 1650
BseNI	ACTGG	6 cut(s)	450, 469, 535, 1025, 1053, 1372
BseRI	GAGGAG	8 cut(s)	36, 84, 87, 834, 926, 1049, 1298, 1635
BseSI	GKGCMC	2 cut(s)	280, 384
BseXI	GCAGC	6 cut(s)	53, 757, 967, 1345, 1388, 1637
BseYI	CCCAGC	2 cut(s)	279, 357
BsgI	GTGCAG	2 cut(s)	1395, 1931
BshFI	GGCC	3 cut(s)	266, 1371, 1738
BshTI	ACCGGT	1 cut(s)	1837
BsiHKAI	GWGCWC	2 cut(s)	337, 1125
BsiHKCI	CYCGRG	2 cut(s)	1031, 1831
BsiSI	CCGG	8 cut(s)	155, 259, 311, 1089, 1460, 1832, 1838, 1973
BslFI	GGGAC	4 cut(s)	1085, 1848, 1902, 2011
BslI	CCNNNNNNNGG	8 cut(s)	623, 862, 1038, 1088, 1089, 1493, 1837, 1972
BsmAI	GTCTC	4 cut(s)	1021, 1059, 1187, 1459
BsmFI	GGGAC	4 cut(s)	1085, 1848, 1902, 2011
BsmI	GAATGC	2 cut(s)	377, 1405
BsnI	GGCC	3 cut(s)	266, 1371, 1738
Bso31I	GGTCTC	2 cut(s)	1021, 1459
BsoBI	CYCGRG	2 cut(s)	1031, 1831
Bsp1286I	GDGCHC	4 cut(s)	280, 337, 384, 1125
Bsp143I	GATC	7 cut(s)	202, 286, 550, 1044, 1144, 1224, 1902
Bsp1720I	GCTNAGC	1 cut(s)	851
BspACI	CCGC	6 cut(s)	590, 656, 848, 1718, 1735, 1751
BspANI	GGCC	3 cut(s)	266, 1371, 1738
BspCNI	CTCAG	5 cut(s)	843, 1111, 1225, 1303, 1651
BspLI	GGNNCC	3 cut(s)	1276, 1448, 1836
BspMAI	CTGCAG	2 cut(s)	43, 1627
BspMI	ACCTGC	3 cut(s)	46, 1327, 1538
BspPI	GGATC	3 cut(s)	197, 1039, 1139
BspQI	GCTCTTC	1 cut(s)	294
BspTNI	GGTCTC	2 cut(s)	1021, 1459
BsrFI	RCCGGY	1 cut(s)	1837
BsrI	ACTGG	6 cut(s)	450, 469, 535, 1025, 1053, 1372
BssAI	RCCGGY	1 cut(s)	1837
BssECI	CCNNGG	3 cut(s)	1032, 1089, 1831
BssMI	GATC	7 cut(s)	202, 286, 550, 1044, 1144, 1224, 1902
BssNAI	GTATAC	1 cut(s)	1634
Bst1107I	GTATAC	1 cut(s)	1634
Bst2UI	CCWGG	3 cut(s)	145, 1455, 1494
Bst4CI	ACNGT	5 cut(s)	412, 681, 1537, 1909, 1930
Bst6I	CTCTTC	6 cut(s)	294, 396, 855, 942, 1019, 1488
BstC8I	GCNNGC	3 cut(s)	306, 720, 1755
BstDEI	CTNAG	8 cut(s)	362, 851, 1119, 1182, 1212, 1311, 1659, 1764
BstEII	GGTNACC	1 cut(s)	1877
BstENI	CCTNNNNNAGG	1 cut(s)	860
BstHHI	GCGC	1 cut(s)	2051
BstKTI	GATC	7 cut(s)	205, 289, 553, 1047, 1147, 1227, 1905
BstMAI	GTCTC	4 cut(s)	1021, 1059, 1187, 1459
BstMBI	GATC	7 cut(s)	202, 286, 550, 1044, 1144, 1224, 1902
BstMWI	GCNNNNNNNGC	7 cut(s)	724, 1307, 1330, 1385, 1717, 1732, 1780
BstNI	CCWGG	3 cut(s)	145, 1455, 1494
BstNSI	RCATGY	1 cut(s)	1757
BstPI	GGTNACC	1 cut(s)	1877
BstSCI	CCNGG	7 cut(s)	143, 258, 1088, 1453, 1492, 1830, 1831
BstSFI	CTRYAG	2 cut(s)	39, 1623
BstSLI	GKGCMC	2 cut(s)	280, 384
BstV1I	GCAGC	6 cut(s)	53, 757, 967, 1345, 1388, 1637
BstV2I	GAAGAC	2 cut(s)	285, 737
BstX2I	RGATCY	2 cut(s)	202, 1224
BstXI	CCANNNNNNTGG	1 cut(s)	1678
BstYI	RGATCY	2 cut(s)	202, 1224
BstZ17I	GTATAC	1 cut(s)	1634
BsuRI	GGCC	3 cut(s)	266, 1371, 1738
BtsI	GCAGTG	1 cut(s)	1567
BtsIMutI	CAGTG	5 cut(s)	177, 1060, 1365, 1567, 1914
BveI	ACCTGC	3 cut(s)	46, 1327, 1538
Cac8I	GCNNGC	3 cut(s)	306, 720, 1755
CfoI	GCGC	1 cut(s)	2051
Cfr10I	RCCGGY	1 cut(s)	1837
Cfr13I	GGNCC	3 cut(s)	152, 1457, 1835
Cfr9I	CCCGGG	1 cut(s)	1831
CsiI	ACCWGGT	1 cut(s)	1492
Csp6I	GTAC	3 cut(s)	1543, 1551, 1640
CspAI	ACCGGT	1 cut(s)	1837
CspCI	CAANNNNNGTGG	2 cut(s)	1704, 1739
CviQI	GTAC	3 cut(s)	1543, 1551, 1640
DdeI	CTNAG	8 cut(s)	362, 851, 1119, 1182, 1212, 1311, 1659, 1764
DpnI	GATC	7 cut(s)	204, 288, 552, 1046, 1146, 1226, 1904
DpnII	GATC	7 cut(s)	202, 286, 550, 1044, 1144, 1224, 1902
DraIII	CACNNNGTG	2 cut(s)	262, 1496
DriI	GACNNNNNGTC	1 cut(s)	2023
EaeI	YGGCCR	3 cut(s)	264, 1369, 1736
Eam1104I	CTCTTC	6 cut(s)	294, 396, 855, 942, 1019, 1488
Eam1105I	GACNNNNNGTC	1 cut(s)	2023
EarI	CTCTTC	6 cut(s)	294, 396, 855, 942, 1019, 1488
EciI	GGCGGA	2 cut(s)	605, 671
Eco31I	GGTCTC	2 cut(s)	1021, 1459
Eco47I	GGWCC	3 cut(s)	152, 1457, 1835
Eco57I	CTGAAG	4 cut(s)	318, 662, 756, 1455
Eco88I	CYCGRG	2 cut(s)	1031, 1831
Eco91I	GGTNACC	1 cut(s)	1877
EcoNI	CCTNNNNNAGG	1 cut(s)	860
EcoO65I	GGTNACC	1 cut(s)	1877
EcoRI	GAATTC	2 cut(s)	223, 269
EcoRII	CCWGG	3 cut(s)	143, 1453, 1492
EcoT22I	ATGCAT	2 cut(s)	247, 598
FaqI	GGGAC	4 cut(s)	1085, 1848, 1902, 2011
FauNDI	CATATG	1 cut(s)	1343
FbaI	TGATCA	1 cut(s)	286
FblI	GTMKAC	1 cut(s)	1633
Fnu4HI	GCNGC	7 cut(s)	42, 771, 956, 1334, 1377, 1626, 1736
Fsp4HI	GCNGC	7 cut(s)	42, 771, 956, 1334, 1377, 1626, 1736
FspBI	CTAG	4 cut(s)	674, 1197, 1518, 1629
GlaI	GCGC	1 cut(s)	2050
GluI	GCNGC	7 cut(s)	42, 771, 956, 1334, 1377, 1626, 1736
GsaI	CCCAGC	2 cut(s)	283, 361
GsuI	CTGGAG	3 cut(s)	84, 351, 716
HaeIII	GGCC	3 cut(s)	266, 1371, 1738
HapII	CCGG	8 cut(s)	155, 259, 311, 1089, 1460, 1832, 1838, 1973
HhaI	GCGC	1 cut(s)	2051
Hin6I	GCGC	1 cut(s)	2049
HinP1I	GCGC	1 cut(s)	2049
HindIII	AAGCTT	1 cut(s)	1781
HinfI	GANTC	3 cut(s)	347, 1186, 1790
HpaII	CCGG	8 cut(s)	155, 259, 311, 1089, 1460, 1832, 1838, 1973
Hpy166II	GTNNAC	5 cut(s)	408, 1243, 1432, 1634, 1665
Hpy188I	TCNGA	7 cut(s)	298, 483, 1120, 1660, 1924, 1941, 2013
Hpy188III	TCNNGA	9 cut(s)	101, 200, 548, 1190, 1214, 1230, 1262, 1805, 2004
Hpy8I	GTNNAC	5 cut(s)	408, 1243, 1432, 1634, 1665
HpyAV	CCTTC	6 cut(s)	163, 617, 962, 1460, 1479, 1868
HpyCH4III	ACNGT	5 cut(s)	412, 681, 1537, 1909, 1930
HpyCH4IV	ACGT	1 cut(s)	138
HpyF10VI	GCNNNNNNNGC	7 cut(s)	724, 1307, 1330, 1385, 1717, 1732, 1780
HpyF3I	CTNAG	8 cut(s)	362, 851, 1119, 1182, 1212, 1311, 1659, 1764
HpySE526I	ACGT	1 cut(s)	138
HspAI	GCGC	1 cut(s)	2049
Ksp22I	TGATCA	1 cut(s)	286
Kzo9I	GATC	7 cut(s)	202, 286, 550, 1044, 1144, 1224, 1902
LguI	GCTCTTC	1 cut(s)	294
LmnI	GCTCC	8 cut(s)	49, 313, 332, 423, 703, 876, 913, 1093
Lsp1109I	GCAGC	6 cut(s)	53, 757, 967, 1345, 1388, 1637
LweI	GCATC	7 cut(s)	93, 583, 603, 697, 942, 1698, 1854
MabI	ACCWGGT	1 cut(s)	1492
MaeI	CTAG	4 cut(s)	674, 1197, 1518, 1629
MaeII	ACGT	1 cut(s)	138
MaeIII	GTNAC	5 cut(s)	58, 759, 979, 1392, 1877
MalI	GATC	7 cut(s)	204, 288, 552, 1046, 1146, 1226, 1904
MboI	GATC	7 cut(s)	202, 286, 550, 1044, 1144, 1224, 1902
MfeI	CAATTG	1 cut(s)	774
MflI	RGATCY	2 cut(s)	202, 1224
MhlI	GDGCHC	4 cut(s)	280, 337, 384, 1125
MmeI	TCCRAC	1 cut(s)	918
Mph1103I	ATGCAT	2 cut(s)	247, 598
MseI	TTAA	3 cut(s)	1305, 1509, 1590
MslI	CAYNNNNRTG	3 cut(s)	789, 921, 1676
MspA1I	CMGCKG	1 cut(s)	850
MspI	CCGG	8 cut(s)	155, 259, 311, 1089, 1460, 1832, 1838, 1973
MspR9I	CCNGG	7 cut(s)	145, 260, 1090, 1455, 1494, 1832, 1833
MunI	CAATTG	1 cut(s)	774
Mva1269I	GAATGC	2 cut(s)	377, 1405
MvaI	CCWGG	3 cut(s)	145, 1455, 1494
MwoI	GCNNNNNNNGC	7 cut(s)	724, 1307, 1330, 1385, 1717, 1732, 1780
NciI	CCSGG	4 cut(s)	260, 1090, 1832, 1833
NdeI	CATATG	1 cut(s)	1343
NdeII	GATC	7 cut(s)	202, 286, 550, 1044, 1144, 1224, 1902
NlaIV	GGNNCC	3 cut(s)	1276, 1448, 1836
NmuCI	GTSAC	1 cut(s)	1392
NsiI	ATGCAT	2 cut(s)	247, 598
NspI	RCATGY	1 cut(s)	1757
PaeI	GCATGC	1 cut(s)	1757
PciSI	GCTCTTC	1 cut(s)	294
PctI	GAATGC	2 cut(s)	377, 1405
PfeI	GAWTC	3 cut(s)	347, 1186, 1790
PflMI	CCANNNNNTGG	1 cut(s)	1493
PfoI	TCCNGGA	1 cut(s)	143
PinAI	ACCGGT	1 cut(s)	1837
PkrI	GCNGC	7 cut(s)	43, 772, 957, 1335, 1378, 1627, 1737
PsiI	TTATAA	1 cut(s)	869
Psp6I	CCWGG	3 cut(s)	143, 1453, 1492
PspEI	GGTNACC	1 cut(s)	1877
PspFI	CCCAGC	2 cut(s)	279, 357
PspGI	CCWGG	3 cut(s)	143, 1453, 1492
PspN4I	GGNNCC	3 cut(s)	1276, 1448, 1836
PspPI	GGNCC	3 cut(s)	152, 1457, 1835
PstI	CTGCAG	2 cut(s)	43, 1627
PsuI	RGATCY	2 cut(s)	202, 1224
RsaI	GTAC	3 cut(s)	1544, 1552, 1641
RsaNI	GTAC	3 cut(s)	1543, 1551, 1640
RseI	CAYNNNNRTG	3 cut(s)	789, 921, 1676
SapI	GCTCTTC	1 cut(s)	294
SaqAI	TTAA	3 cut(s)	1305, 1509, 1590
SatI	GCNGC	7 cut(s)	42, 771, 956, 1334, 1377, 1626, 1736
Sau3AI	GATC	7 cut(s)	202, 286, 550, 1044, 1144, 1224, 1902
Sau96I	GGNCC	3 cut(s)	152, 1457, 1835
ScrFI	CCNGG	7 cut(s)	145, 260, 1090, 1455, 1494, 1832, 1833
SduI	GDGCHC	4 cut(s)	280, 337, 384, 1125
SexAI	ACCWGGT	1 cut(s)	1492
SfaNI	GCATC	7 cut(s)	93, 583, 603, 697, 942, 1698, 1854
SfcI	CTRYAG	2 cut(s)	39, 1623
SinI	GGWCC	3 cut(s)	152, 1457, 1835
SmaI	CCCGGG	1 cut(s)	1833
SmiMI	CAYNNNNRTG	3 cut(s)	789, 921, 1676
SmlI	CTYRAG	3 cut(s)	423, 1228, 1883
SmoI	CTYRAG	3 cut(s)	423, 1228, 1883
SpeI	ACTAGT	1 cut(s)	1196
SphI	GCATGC	1 cut(s)	1757
SsiI	CCGC	6 cut(s)	590, 656, 848, 1718, 1735, 1751
SspMI	CTAG	4 cut(s)	674, 1197, 1518, 1629
StyD4I	CCNGG	7 cut(s)	143, 258, 1088, 1453, 1492, 1830, 1831
TaaI	ACNGT	5 cut(s)	412, 681, 1537, 1909, 1930
TaiI	ACGT	1 cut(s)	141
TaqI	TCGA	4 cut(s)	213, 549, 801, 909
TauI	GCSGC	1 cut(s)	1738
TfiI	GAWTC	3 cut(s)	347, 1186, 1790
Tru1I	TTAA	3 cut(s)	1305, 1509, 1590
Tru9I	TTAA	3 cut(s)	1305, 1509, 1590
TscAI	CASTG	5 cut(s)	184, 1060, 1372, 1567, 1914
TseFI	GTSAC	1 cut(s)	1392
TseI	GCWGC	6 cut(s)	41, 770, 955, 1333, 1376, 1625
Tsp45I	GTSAC	1 cut(s)	1392
TspDTI	ATGAA	4 cut(s)	470, 957, 989, 1887
TspGWI	ACGGA	2 cut(s)	263, 1596
TspMI	CCCGGG	1 cut(s)	1831
TspRI	CASTG	5 cut(s)	184, 1060, 1372, 1567, 1914
Van91I	CCANNNNNTGG	1 cut(s)	1493
VpaK11BI	GGWCC	3 cut(s)	152, 1457, 1835
XagI	CCTNNNNNAGG	1 cut(s)	860
XapI	RAATTY	7 cut(s)	158, 209, 223, 269, 1814, 1950, 1999
XceI	RCATGY	1 cut(s)	1757
XmaI	CCCGGG	1 cut(s)	1831
XmiI	GTMKAC	1 cut(s)	1633
XspI	CTAG	4 cut(s)	674, 1197, 1518, 1629
Zsp2I	ATGCAT	2 cut(s)	247, 598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.