Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0003843

Physical Location & Seq

Genomic Coordinates Forward (+)

10056711 .. 10060980

Gene Structure 4270 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0127600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGACTCCCAGCTCCGACCACCCTCTCGACTGGAAGTTCTCTCAGGTTTTCGGCGAACGAGCTCCCGGTGATGAACTTCAGGAAGTTGATGTGATATCTGCTATTGGATTCGACAAGAGTGGTGATCACCTTGCCATTGGAGATCGAGGTGGCCGCTGCGTAATCTTCGAGAGGAAGGATGGGAAACATAATTTGGATGAGCACCGTTCTCGACTTGAACTGGAGCAGTTGGACGTTACGTCCACCCAGCATCCGGAATTCCAATTCAAGACCGAGTTTCAGAGTCATGAACCGGAGTTTGACTACTTGAAGAGTGTCGAAATTGAGGAGAAGATCAACAAAGTAAAGTGGTGCGCAACATCCAACGGATCCCAGTTTATTCTTTCAACAAATGACAAGACAATAAAACTGTGGAAGGTTAAGGAAGGTAAGGTGAAGAAAGTAAAAGAAATGAACCCTGGTCCACTTACGAGTTCAGATAATGTGCTTTTGTCTGAAAAGAGTTTCATCAGTAGAGAAGATAAACCTACTGTTGCTAATGGCTATCGTCAAGAATGGGCGGAGAAGATGGCTAATAACGTGTCCCAGTATCAAGACATACATGCCAAGGTTGCTGACGCTGAAGACACTGCCCAAACGAGATGCCGAAAGGTGTATGCTCATGCTCATGATTATAATATTCACTCCATCTCAAATAATAGCGATGGTGAAACTTTTCTTTCTGCAGATGACCTTAGAATAAACTTGTGGAATCTTGAGATCAGCGATCAATGTTTCAATATTATAGACATGAAGCCACCGAACATGGACGATCTGACTGAGGTCATAACATCGGCTGAATTCCATCCCGTTCATTGTAATCTGCTTGCATACAGCAGCTCAAGAGGTTTTATTCGCTTAGTTGACATGAGGCAGTCAGCTTTATGCGATAACAGTGCAAGAATATTACAAGATGGAGATTCAAATGCTTTAAAGTCATTTTTCACAGAAATTATTGCATCCATCTCTGACATCAAGTTTTCAAAGGATGGGCGGTACATCTTAAGTCGTGACTACATGAATCTAAAGCTCTGGGACGTGCATATGGATTCTTCACCAGTTGCAATATACAGGATTCATGAGCACCTGCGCCCTAAGTTATCTGAGTTGTATACTAATGATCGCATATTTGATAAATTTGGGTGCTGCTTCAGTGGAGATGGACTTCATTATGCAACTGGGTCTTATAGCAACCTAGTACGCATTTTCTCCCATGGTATTGGAGGTGAAGAAGGAACTACAATAGAAGCTAGCAAAACTCCTAACAGGAAGCCACTTCCGCGGGCTGCTCCAAGGGTTAGGAGGTCATCCTTGAGCAACCTGGCAAGAGGATTTTACCGGCATGGGCATGAAAATTCAAGCTCGGCCGGTAACGATATCAGTTATGACTTAAGCTCCAAGCTATTACAGGTGGCATGGCATCCAGAAGCAAACTTAATTGCTAGTGCAGCTGGGAATAGCTTGTTCATGTATTATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009791 GO:0009798 GO:0009889 GO:0009908 GO:0009943 GO:0009944 GO:0009955 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065001 GO:0065007 GO:0080090 GO:0090567 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

506

Amino Acids

57.25

Weight (kDa)

5.93

Isoelectric Point (pI)

39.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	186 - 360	2.4e-06	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003843)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32240 AT1G32240 AT1G32240
fragaria_vesca	FvH4_5g22990 FvH4_5g22990 FvH4_5g22990 FvH4_5g22990 FvH4_5g22990 FvH4_5g22990 FvH4_5g22990 FvH4_5g22990
malus_domestica	MD06G1026200.v1.1 MD16G1279800.v1.1
prunus_persica	Prupe.5G028400_v2.0.a1 Prupe.5G028400_v2.0.a1 Prupe.5G028400_v2.0.a1 Prupe.5G028400_v2.0.a1 Prupe.5G028400_v2.0.a1 Prupe.5G028400_v2.0.a1
pyrus_communis	pycom06g02130 pycom16g25010
rosa_chinensis	RchiOBHm_Chr7g0211731
rosa_laevigata	RLG00000002974
rosa_multiflora	Rmu_sc0001875.1_g000015
rosa_roxburghii	Rroxscaffold_3G00247530
rosa_rugosa	Rorug07G0127500 Rorug07G0127600 Rorug07G0127700 Rorug07G0127800
rosa_samantha	Rh7AG260700 Rh7BG253900 Rh7CG277200 Rh7DG267300
rosa_wichuraiana	Rw7G022220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	675
AarI	CACCTGC	1 cut(s)	1134
Acc16I	TGCGCA	1 cut(s)	355
Acc36I	ACCTGC	1 cut(s)	1134
AccI	GTMKAC	1 cut(s)	1151
AccII	CGCG	1 cut(s)	1321
AccIII	TCCGGA	1 cut(s)	253
AciI	CCGC	5 cut(s)	154, 560, 1033, 1319, 1321
AclWI	GGATC	2 cut(s)	363, 376
AcoI	YGGCCR	2 cut(s)	151, 1404
AcsI	RAATTY	4 cut(s)	257, 839, 1175, 1393
AcuI	CTGAAG	3 cut(s)	62, 642, 1174
AfaI	GTAC	2 cut(s)	1037, 1239
AfiI	CCNNNNNNNGG	1 cut(s)	253
AflII	CTTAAG	2 cut(s)	1042, 1429
AflIII	ACRYGT	1 cut(s)	579
AgsI	TTSAA	8 cut(s)	218, 268, 310, 387, 778, 963, 1023, 1398
AhdI	GACNNNNNGTC	1 cut(s)	238
AjiI	CACGTC	1 cut(s)	1078
AjnI	CCWGG	2 cut(s)	457, 1359
AjuI	GAANNNNNNNTTGG	2 cut(s)	176, 208
Alw21I	GWGCWC	3 cut(s)	64, 204, 1125
AlwI	GGATC	2 cut(s)	363, 376
Aor13HI	TCCGGA	1 cut(s)	253
AoxI	GGCC	2 cut(s)	151, 1404
ApeKI	GCWGC	5 cut(s)	156, 876, 1185, 1325, 1487
ApoI	RAATTY	4 cut(s)	257, 839, 1175, 1393
Asp700I	GAANNNNTTC	1 cut(s)	714
AspLEI	GCGC	2 cut(s)	356, 1131
AspS9I	GGNCC	1 cut(s)	461
AsuC2I	CCSGG	1 cut(s)	66
AsuHPI	GGTGA	7 cut(s)	80, 119, 134, 445, 719, 1086, 1277
AsuNHI	GCTAGC	1 cut(s)	1289
AvaII	GGWCC	1 cut(s)	461
BamHI	GGATCC	1 cut(s)	368
BanII	GRGCYC	1 cut(s)	64
BbsI	GAAGAC	1 cut(s)	630
Bbv12I	GWGCWC	3 cut(s)	64, 204, 1125
BbvI	GCAGC	5 cut(s)	143, 888, 1172, 1312, 1499
BccI	CCATC	9 cut(s)	173, 562, 695, 698, 852, 947, 1010, 1022, 1193
BcgI	CGANNNNNNTGC	4 cut(s)	191, 225, 917, 951
BciT130I	CCWGG	2 cut(s)	459, 1361
BclI	TGATCA	1 cut(s)	124
BcnI	CCSGG	1 cut(s)	66
BfaI	CTAG	3 cut(s)	1235, 1290, 1482
BfmI	CTRYAG	1 cut(s)	723
BfrI	CTTAAG	2 cut(s)	1042, 1429
BfuAI	ACCTGC	1 cut(s)	1134
BisI	GCNGC	6 cut(s)	154, 157, 877, 1186, 1326, 1488
BlsI	GCNGC	6 cut(s)	155, 158, 878, 1187, 1327, 1489
Bme1390I	CCNGG	3 cut(s)	66, 459, 1361
Bme18I	GGWCC	1 cut(s)	461
BmeRI	GACNNNNNGTC	1 cut(s)	238
BmgBI	CACGTC	1 cut(s)	1078
BmgT120I	GGNCC	1 cut(s)	461
BmiI	GGNNCC	1 cut(s)	370
BmrFI	CCNGG	3 cut(s)	66, 459, 1361
BmrI	ACTGGG	3 cut(s)	367, 580, 1227
BmsI	GCATC	4 cut(s)	259, 632, 1007, 1468
BmtI	GCTAGC	1 cut(s)	1293
BmuI	ACTGGG	3 cut(s)	367, 580, 1227
BoxI	GACNNNNGTC	1 cut(s)	821
BpiI	GAAGAC	1 cut(s)	630
BpmI	CTGGAG	1 cut(s)	242
BpuEI	CTTGAG	3 cut(s)	776, 865, 1372
BpuMI	CCSGG	1 cut(s)	66
BsaJI	CCNNGG	5 cut(s)	457, 606, 1252, 1319, 1331
BsaWI	WCCGGW	2 cut(s)	253, 292
BsaXI	ACNNNNNCTCC	2 cut(s)	1418, 1448
Bsc4I	CCNNNNNNNGG	1 cut(s)	253
Bse118I	RCCGGY	2 cut(s)	1377, 1406
Bse1I	ACTGG	6 cut(s)	35, 225, 373, 586, 1097, 1222
BseAI	TCCGGA	1 cut(s)	253
BseBI	CCWGG	2 cut(s)	459, 1361
BseDI	CCNNGG	5 cut(s)	457, 606, 1252, 1319, 1331
BseGI	GGATG	9 cut(s)	184, 202, 250, 359, 844, 998, 1033, 1346, 1459
BseLI	CCNNNNNNNGG	1 cut(s)	253
BseMII	CTCAG	3 cut(s)	56, 810, 1134
BseNI	ACTGG	6 cut(s)	35, 225, 373, 586, 1097, 1222
BseRI	GAGGAG	1 cut(s)	341
BseX3I	CGGCCG	1 cut(s)	1404
BseXI	GCAGC	5 cut(s)	143, 888, 1172, 1312, 1499
BseYI	CCCAGC	3 cut(s)	8, 246, 1490
BsgI	GTGCAG	1 cut(s)	1506
Bsh1236I	CGCG	1 cut(s)	1321
Bsh1285I	CGRYCG	1 cut(s)	1407
BshFI	GGCC	2 cut(s)	153, 1406
BsiEI	CGRYCG	1 cut(s)	1407
BsiHKAI	GWGCWC	3 cut(s)	64, 204, 1125
BsiSI	CCGG	5 cut(s)	66, 254, 293, 1378, 1407
BslFI	GGGAC	2 cut(s)	568, 1088
BslI	CCNNNNNNNGG	1 cut(s)	253
BsmFI	GGGAC	2 cut(s)	568, 1088
BsnI	GGCC	2 cut(s)	153, 1406
Bsp1286I	GDGCHC	3 cut(s)	64, 204, 1125
Bsp13I	TCCGGA	1 cut(s)	253
Bsp143I	GATC	8 cut(s)	124, 142, 333, 368, 759, 766, 811, 1159
Bsp19I	CCATGG	1 cut(s)	1252
BspACI	CCGC	5 cut(s)	154, 560, 1033, 1319, 1321
BspANI	GGCC	2 cut(s)	153, 1406
BspCNI	CTCAG	3 cut(s)	55, 811, 1135
BspEI	TCCGGA	1 cut(s)	253
BspFNI	CGCG	1 cut(s)	1321
BspHI	TCATGA	3 cut(s)	286, 667, 1117
BspLI	GGNNCC	1 cut(s)	370
BspMAI	CTGCAG	1 cut(s)	727
BspMI	ACCTGC	1 cut(s)	1134
BspOI	GCTAGC	1 cut(s)	1293
BspPI	GGATC	2 cut(s)	363, 376
BspTI	CTTAAG	2 cut(s)	1042, 1429
BsrFI	RCCGGY	2 cut(s)	1377, 1406
BsrI	ACTGG	6 cut(s)	35, 225, 373, 586, 1097, 1222
BssAI	RCCGGY	2 cut(s)	1377, 1406
BssECI	CCNNGG	5 cut(s)	457, 606, 1252, 1319, 1331
BssMI	GATC	8 cut(s)	124, 142, 333, 368, 759, 766, 811, 1159
BssNAI	GTATAC	1 cut(s)	1152
BssT1I	CCWWGG	3 cut(s)	606, 1252, 1331
Bst1107I	GTATAC	1 cut(s)	1152
Bst2UI	CCWGG	2 cut(s)	459, 1361
Bst4CI	ACNGT	4 cut(s)	206, 411, 532, 935
Bst6I	CTCTTC	1 cut(s)	305
BstAFI	CTTAAG	2 cut(s)	1042, 1429
BstC8I	GCNNGC	3 cut(s)	867, 1291, 1323
BstDEI	CTNAG	6 cut(s)	42, 734, 819, 898, 1134, 1143
BstDSI	CCRYGG	2 cut(s)	1252, 1319
BstF5I	GGATG	9 cut(s)	184, 202, 250, 359, 844, 998, 1033, 1346, 1459
BstFNI	CGCG	1 cut(s)	1321
BstHHI	GCGC	2 cut(s)	356, 1131
BstKTI	GATC	8 cut(s)	127, 145, 336, 371, 762, 769, 814, 1162
BstMBI	GATC	8 cut(s)	124, 142, 333, 368, 759, 766, 811, 1159
BstMCI	CGRYCG	1 cut(s)	1407
BstMWI	GCNNNNNNNGC	3 cut(s)	611, 1318, 1487
BstNI	CCWGG	2 cut(s)	459, 1361
BstNSI	RCATGY	1 cut(s)	605
BstPAI	GACNNNNGTC	1 cut(s)	821
BstSCI	CCNGG	3 cut(s)	64, 457, 1359
BstSFI	CTRYAG	1 cut(s)	723
BstUI	CGCG	1 cut(s)	1321
BstV1I	GCAGC	5 cut(s)	143, 888, 1172, 1312, 1499
BstV2I	GAAGAC	1 cut(s)	630
BstX2I	RGATCY	1 cut(s)	368
BstXI	CCANNNNNNTGG	1 cut(s)	1259
BstYI	RGATCY	1 cut(s)	368
BstZ17I	GTATAC	1 cut(s)	1152
BstZI	CGGCCG	1 cut(s)	1404
BsuRI	GGCC	2 cut(s)	153, 1406
BtgI	CCRYGG	2 cut(s)	1252, 1319
BtgZI	GCGATG	1 cut(s)	717
BtrI	CACGTC	1 cut(s)	1078
BtsCI	GGATG	9 cut(s)	184, 202, 250, 359, 844, 998, 1033, 1346, 1459
BtsI	GCAGTG	1 cut(s)	627
BtsIMutI	CAGTG	3 cut(s)	627, 940, 1198
BveI	ACCTGC	1 cut(s)	1134
Cac8I	GCNNGC	3 cut(s)	867, 1291, 1323
CciI	TCATGA	3 cut(s)	286, 667, 1117
CfoI	GCGC	2 cut(s)	356, 1131
Cfr10I	RCCGGY	2 cut(s)	1377, 1406
Cfr13I	GGNCC	1 cut(s)	461
Cfr42I	CCGCGG	1 cut(s)	1322
CseI	GACGC	1 cut(s)	626
Csp6I	GTAC	2 cut(s)	1036, 1238
CviQI	GTAC	2 cut(s)	1036, 1238
DdeI	CTNAG	6 cut(s)	42, 734, 819, 898, 1134, 1143
DpnI	GATC	8 cut(s)	126, 144, 335, 370, 761, 768, 813, 1161
DpnII	GATC	8 cut(s)	124, 142, 333, 368, 759, 766, 811, 1159
DraI	TTTAAA	1 cut(s)	972
DriI	GACNNNNNGTC	1 cut(s)	238
EaeI	YGGCCR	2 cut(s)	151, 1404
EagI	CGGCCG	1 cut(s)	1404
Eam1104I	CTCTTC	1 cut(s)	305
Eam1105I	GACNNNNNGTC	1 cut(s)	238
EarI	CTCTTC	1 cut(s)	305
EciI	GGCGGA	1 cut(s)	575
Ecl136II	GAGCTC	1 cut(s)	62
EclXI	CGGCCG	1 cut(s)	1404
Eco130I	CCWWGG	3 cut(s)	606, 1252, 1331
Eco24I	GRGCYC	1 cut(s)	64
Eco32I	GATATC	2 cut(s)	96, 1417
Eco47I	GGWCC	1 cut(s)	461
Eco52I	CGGCCG	1 cut(s)	1404
Eco53kI	GAGCTC	1 cut(s)	62
Eco57I	CTGAAG	3 cut(s)	62, 642, 1174
EcoICRI	GAGCTC	1 cut(s)	62
EcoRI	GAATTC	2 cut(s)	257, 839
EcoRII	CCWGG	2 cut(s)	457, 1359
EcoRV	GATATC	2 cut(s)	96, 1417
EcoT14I	CCWWGG	3 cut(s)	606, 1252, 1331
EcoT22I	ATGCAT	1 cut(s)	1519
EcoT38I	GRGCYC	1 cut(s)	64
ErhI	CCWWGG	3 cut(s)	606, 1252, 1331
FaqI	GGGAC	2 cut(s)	568, 1088
FauI	CCCGC	1 cut(s)	1314
FauNDI	CATATG	1 cut(s)	1083
FbaI	TGATCA	1 cut(s)	124
FblI	GTMKAC	1 cut(s)	1151
Fnu4HI	GCNGC	6 cut(s)	154, 157, 877, 1186, 1326, 1488
FokI	GGATG	9 cut(s)	191, 209, 237, 346, 831, 985, 1040, 1333, 1446
FriOI	GRGCYC	1 cut(s)	64
Fsp4HI	GCNGC	6 cut(s)	154, 157, 877, 1186, 1326, 1488
FspBI	CTAG	3 cut(s)	1235, 1290, 1482
FspI	TGCGCA	1 cut(s)	355
GlaI	GCGC	2 cut(s)	355, 1130
GluI	GCNGC	6 cut(s)	154, 157, 877, 1186, 1326, 1488
GsaI	CCCAGC	3 cut(s)	12, 250, 1494
GsuI	CTGGAG	1 cut(s)	242
HaeIII	GGCC	2 cut(s)	153, 1406
HapII	CCGG	5 cut(s)	66, 254, 293, 1378, 1407
HgaI	GACGC	1 cut(s)	626
HhaI	GCGC	2 cut(s)	356, 1131
Hin6I	GCGC	2 cut(s)	354, 1129
HinP1I	GCGC	2 cut(s)	354, 1129
HincII	GTYRAC	1 cut(s)	904
HindII	GTYRAC	1 cut(s)	904
HinfI	GANTC	8 cut(s)	4, 108, 283, 751, 959, 1060, 1088, 1114
HpaII	CCGG	5 cut(s)	66, 254, 293, 1378, 1407
HphI	GGTGA	7 cut(s)	80, 119, 134, 445, 719, 1086, 1277
Hpy166II	GTNNAC	4 cut(s)	243, 464, 904, 1152
Hpy188I	TCNGA	7 cut(s)	16, 282, 478, 496, 816, 1009, 1144
Hpy8I	GTNNAC	4 cut(s)	243, 464, 904, 1152
HpyAV	CCTTC	4 cut(s)	169, 409, 419, 1265
HpyCH4III	ACNGT	4 cut(s)	206, 411, 532, 935
HpyCH4IV	ACGT	4 cut(s)	234, 239, 579, 1077
HpyCH4V	TGCA	9 cut(s)	725, 869, 938, 998, 1081, 1103, 1214, 1487, 1517
HpyF10VI	GCNNNNNNNGC	3 cut(s)	611, 1318, 1487
HpyF3I	CTNAG	6 cut(s)	42, 734, 819, 898, 1134, 1143
HpySE526I	ACGT	4 cut(s)	234, 239, 579, 1077
HspAI	GCGC	2 cut(s)	354, 1129
Kpn2I	TCCGGA	1 cut(s)	253
Ksp22I	TGATCA	1 cut(s)	124
KspI	CCGCGG	1 cut(s)	1322
Kzo9I	GATC	8 cut(s)	124, 142, 333, 368, 759, 766, 811, 1159
LmnI	GCTCC	5 cut(s)	17, 67, 223, 1333, 1439
Lsp1109I	GCAGC	5 cut(s)	143, 888, 1172, 1312, 1499
LweI	GCATC	4 cut(s)	259, 632, 1007, 1468
MaeI	CTAG	3 cut(s)	1235, 1290, 1482
MaeII	ACGT	4 cut(s)	234, 239, 579, 1077
MaeIII	GTNAC	3 cut(s)	235, 1049, 1409
MalI	GATC	8 cut(s)	126, 144, 335, 370, 761, 768, 813, 1161
MboI	GATC	8 cut(s)	124, 142, 333, 368, 759, 766, 811, 1159
MboII	GAAGA	9 cut(s)	157, 322, 343, 448, 530, 577, 635, 1083, 1280
MflI	RGATCY	1 cut(s)	368
MhlI	GDGCHC	3 cut(s)	64, 204, 1125
MluCI	AATT	9 cut(s)	190, 257, 263, 321, 839, 990, 1175, 1393, 1476
MlyI	GAGTC	1 cut(s)	292
MmeI	TCCRAC	3 cut(s)	39, 210, 387
Mph1103I	ATGCAT	1 cut(s)	1519
MroI	TCCGGA	1 cut(s)	253
MroXI	GAANNNNTTC	1 cut(s)	714
MseI	TTAA	5 cut(s)	420, 971, 1043, 1430, 1475
MslI	CAYNNNNRTG	2 cut(s)	666, 1386
MspA1I	CMGCKG	3 cut(s)	156, 1321, 1490
MspCI	CTTAAG	2 cut(s)	1042, 1429
MspI	CCGG	5 cut(s)	66, 254, 293, 1378, 1407
MspR9I	CCNGG	3 cut(s)	66, 459, 1361
MvaI	CCWGG	2 cut(s)	459, 1361
MvnI	CGCG	1 cut(s)	1321
MwoI	GCNNNNNNNGC	3 cut(s)	611, 1318, 1487
NciI	CCSGG	1 cut(s)	66
NcoI	CCATGG	1 cut(s)	1252
NdeI	CATATG	1 cut(s)	1083
NdeII	GATC	8 cut(s)	124, 142, 333, 368, 759, 766, 811, 1159
NheI	GCTAGC	1 cut(s)	1289
NlaIV	GGNNCC	1 cut(s)	370
NmeAIII	GCCGAG	1 cut(s)	1382
NmuCI	GTSAC	1 cut(s)	1049
NsbI	TGCGCA	1 cut(s)	355
NsiI	ATGCAT	1 cut(s)	1519
NspI	RCATGY	1 cut(s)	605
PagI	TCATGA	3 cut(s)	286, 667, 1117
PaqCI	CACCTGC	1 cut(s)	1134
PdmI	GAANNNNTTC	1 cut(s)	714
PfeI	GAWTC	6 cut(s)	108, 751, 959, 1060, 1088, 1114
PkrI	GCNGC	6 cut(s)	155, 158, 878, 1187, 1327, 1489
PleI	GAGTC	1 cut(s)	291
PpsI	GAGTC	1 cut(s)	291
PshAI	GACNNNNGTC	1 cut(s)	821
PsiI	TTATAA	1 cut(s)	675
Psp124BI	GAGCTC	1 cut(s)	64
Psp6I	CCWGG	2 cut(s)	457, 1359
PspFI	CCCAGC	3 cut(s)	8, 246, 1490
PspGI	CCWGG	2 cut(s)	457, 1359
PspN4I	GGNNCC	1 cut(s)	370
PspPI	GGNCC	1 cut(s)	461
PstI	CTGCAG	1 cut(s)	727
PsuI	RGATCY	1 cut(s)	368
PvuII	CAGCTG	1 cut(s)	1490
RsaI	GTAC	2 cut(s)	1037, 1239
RsaNI	GTAC	2 cut(s)	1036, 1238
RseI	CAYNNNNRTG	2 cut(s)	666, 1386
SacI	GAGCTC	1 cut(s)	64
SacII	CCGCGG	1 cut(s)	1322
SaqAI	TTAA	5 cut(s)	420, 971, 1043, 1430, 1475
SatI	GCNGC	6 cut(s)	154, 157, 877, 1186, 1326, 1488
Sau3AI	GATC	8 cut(s)	124, 142, 333, 368, 759, 766, 811, 1159
Sau96I	GGNCC	1 cut(s)	461
SchI	GAGTC	1 cut(s)	292
ScrFI	CCNGG	3 cut(s)	66, 459, 1361
SduI	GDGCHC	3 cut(s)	64, 204, 1125
SfaNI	GCATC	4 cut(s)	259, 632, 1007, 1468
SfcI	CTRYAG	1 cut(s)	723
Sfr303I	CCGCGG	1 cut(s)	1322
SgrBI	CCGCGG	1 cut(s)	1322
SinI	GGWCC	1 cut(s)	461
SmiMI	CAYNNNNRTG	2 cut(s)	666, 1386
SmlI	CTYRAG	5 cut(s)	755, 880, 1042, 1351, 1429
SmoI	CTYRAG	5 cut(s)	755, 880, 1042, 1351, 1429
Sse9I	AATT	9 cut(s)	190, 257, 263, 321, 839, 990, 1175, 1393, 1476
SsiI	CCGC	5 cut(s)	154, 560, 1033, 1319, 1321
SspI	AATATT	3 cut(s)	679, 781, 945
SspMI	CTAG	3 cut(s)	1235, 1290, 1482
SstI	GAGCTC	1 cut(s)	64
StyD4I	CCNGG	3 cut(s)	64, 457, 1359
StyI	CCWWGG	3 cut(s)	606, 1252, 1331
TaaI	ACNGT	4 cut(s)	206, 411, 532, 935
TaiI	ACGT	4 cut(s)	237, 242, 582, 1080
TaqI	TCGA	6 cut(s)	27, 111, 145, 168, 211, 318
TaqII	GACCGA	1 cut(s)	287
TasI	AATT	9 cut(s)	190, 257, 263, 321, 839, 990, 1175, 1393, 1476
TauI	GCSGC	1 cut(s)	156
TfiI	GAWTC	6 cut(s)	108, 751, 959, 1060, 1088, 1114
Tru1I	TTAA	5 cut(s)	420, 971, 1043, 1430, 1475
Tru9I	TTAA	5 cut(s)	420, 971, 1043, 1430, 1475
TscAI	CASTG	3 cut(s)	634, 940, 1198
TseFI	GTSAC	1 cut(s)	1049
TseI	GCWGC	5 cut(s)	156, 876, 1185, 1325, 1487
Tsp45I	GTSAC	1 cut(s)	1049
TspGWI	ACGGA	1 cut(s)	381
TspRI	CASTG	3 cut(s)	634, 940, 1198
Vha464I	CTTAAG	2 cut(s)	1042, 1429
VpaK11BI	GGWCC	1 cut(s)	461
XapI	RAATTY	4 cut(s)	257, 839, 1175, 1393
XceI	RCATGY	1 cut(s)	605
XmiI	GTMKAC	1 cut(s)	1151
XmnI	GAANNNNTTC	1 cut(s)	714
XspI	CTAG	3 cut(s)	1235, 1290, 1482
Zsp2I	ATGCAT	1 cut(s)	1519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.