Rorug07G0173900

Pectate lyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0008415
Physical Location & Seq
Reverse (-)
14251667 .. 14255954
4288 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0173900.1

Sequence Viewer

Length: 1443 bp
ATGGGCAAAGCTTCTAGATGGTTTCGCAGCGTTCTCGGCCTCAAAAAGTCCGATAAGACCCACAACAACAACAACAACTCCTCATCACCTTGTCCCAAACCGCCATCCACCAAGCGCAGATGGAGCTTTGTCAAGTCCTACAGAGAAAAACACCACCCACACAATCACAACCACCAAACCGACCCCGCTGACGAGTCCTCCTCCGCTAACGACGTCGCTGATCCGAACAAGCATGCCATCGCCGTGGCGGCCGCGACAGCTGCTGTGGCCGAGGCCGCTGTTGCCGCCGCCCAAGCTGCCGCGGCCGTCGTCCGCCTCACCAGCAGCGGACGGTGTCCCAACAACAACAACAACCCCGCGGCGTACGTTAGCGGAGGCGGAGGAGGAAGCGTTGGGATTCGCGAGGAGTGGGCAGCTGTGAAAATCCAAGCGGCGTTCCGTGGCTGTTTGGCGAGGAGAGCATTGCGTGCATTAAAAGGACTGGTGAGGCTTCAAGCACTGGTTAGAGGTCATATTGAGAGGAAGAAGTGGGCTAAGCGGTACCAGCGGTTTCAAGCAATATTGCGAGCGCAGGCCAGAGCTCGAGCAGGGCGAACCCAGATCTCAGAGCTCTCACATTCACATTCAAGTTCCCAATCTTCTCAGATTCACCAACCTGGTCCTGCAACCCCTGAAAAATTTGAACATGGCCTTCGATCCAGGAGTACAAAACATGAACATTCATCAATACTCCGGAGAAATAGCTCAAGATCAAATGGTAGGATTATTGGTGATCATGACAGAGCTCACTCGGAACGATCATGGGAGCAACCAGGGTCTGCAGTGAAGAATGGCACTCCTGAGGATGAGAAGAACGACAAGGTCCTCGAAATCGATACTGGGAAACCCCATATTGCAGCTAAACGTAGAAATCTCTTCCACTCTACTCATCTTGCTGTCGCTTCAGACCAATACAGCCATAGCTTTACTACATCAAAGGACTCAACAACTCATCAGACACTTCCAAGTCCGTCTTCTTGTGAAGTCCAATCGTTAACCCCATTGAAATTCTCTAGAGAGCTGGAGGAAGACGCATTCTGCACAGCTAACAATAGCCCACAGTTTTATTCTGCTACTTCTTCAAGGGGTGGTAATTCAAAGAAAAGTCCTTTCACTCCCACAAAGAGCGATGGCTCGAAAAGTTACCTGAGTGGGTACTCAGATTACCCGAACTACATGGCATGCACTCAATCTTCAAAGGCTAAGCTGAGGTCACTTAGTGCTCCGAAGCAGAGGCCTCAGTATGAGAGGTCTAGTTCAGCAAAGAGGTACTCTGTAGGCTTTGGTGAATCAAGATCAAATGCACAAAGGAGTTCAGCCTTGCATTCAAACTTCACAAATAAAGCCTACCCAGGATCTGGTCGCTTGGACAAGCTTGGCATGCCTGTAGGTTACAGATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00040 ko02024 map00040 map02024
Pfam Domains
Protein Families
Pec_lyase_C

Protein Analysis

480

Amino Acids

52.57

Weight (kDa)

10.23

Isoelectric Point (pI)

63.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4005 PF13178 365 - 452 1.1e-09 Protein of unknown function (DUF4005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 216
Acc65I GGTACC 1 cut(s) 540
AccB1I GGYRCC 1 cut(s) 540
AccB7I CCANNNNNTGG 1 cut(s) 1397
AccII CGCG 4 cut(s) 254, 302, 359, 402
AccIII TCCGGA 1 cut(s) 732
AclWI GGATC 3 cut(s) 215, 690, 1402
AcoI YGGCCR 3 cut(s) 249, 267, 303
AcsI RAATTY 2 cut(s) 677, 1046
AcuI CTGAAG 1 cut(s) 927
AcyI GRCGYC 1 cut(s) 213
AdeI CACNNNGTG 1 cut(s) 1259
AfaI GTAC 5 cut(s) 365, 542, 706, 1196, 1310
AfiI CCNNNNNNNGG 1 cut(s) 1397
AgsI TTSAA 9 cut(s) 494, 554, 627, 683, 1045, 1122, 1137, 1236, 1368
AjnI CCWGG 4 cut(s) 655, 698, 811, 1390
AjuI GAANNNNNNNTTGG 2 cut(s) 997, 1029
Alw21I GWGCWC 4 cut(s) 583, 612, 787, 1264
AlwI GGATC 3 cut(s) 215, 690, 1402
AlwNI CAGNNNCTG 3 cut(s) 263, 818, 1397
Ama87I CYCGRG 1 cut(s) 582
Aor13HI TCCGGA 1 cut(s) 732
AoxI GGCC 8 cut(s) 37, 249, 267, 273, 303, 573, 688, 1274
ApeKI GCWGC 6 cut(s) 27, 260, 296, 324, 413, 896
ApoI RAATTY 2 cut(s) 677, 1046
Asp718I GGTACC 1 cut(s) 540
AspLEI GCGC 2 cut(s) 117, 571
AspS9I GGNCC 2 cut(s) 659, 862
AsuHPI GGTGA 6 cut(s) 78, 310, 496, 641, 782, 1337
AvaI CYCGRG 1 cut(s) 582
AvaII GGWCC 2 cut(s) 659, 862
AxyI CCTNAGG 1 cut(s) 840
BanI GGYRCC 1 cut(s) 540
BanII GRGCYC 3 cut(s) 583, 612, 787
BbsI GAAGAC 2 cut(s) 1005, 1074
Bbv12I GWGCWC 4 cut(s) 583, 612, 787, 1264
BbvCI CCTCAGC 1 cut(s) 1247
BbvI GCAGC 6 cut(s) 39, 247, 283, 336, 425, 908
BccI CCATC 5 cut(s) 12, 112, 114, 245, 1163
BceAI ACGGC 2 cut(s) 227, 290
BcgI CGANNNNNNTGC 2 cut(s) 16, 50
BciT130I CCWGG 4 cut(s) 657, 700, 813, 1392
BclI TGATCA 1 cut(s) 772
BfaI CTAG 3 cut(s) 15, 1053, 1293
BfmI CTRYAG 4 cut(s) 139, 819, 1314, 1425
BglI GCCNNNNNGGC 1 cut(s) 248
BglII AGATCT 1 cut(s) 600
BlpI GCTNAGC 2 cut(s) 534, 1242
Bme1390I CCNGG 4 cut(s) 657, 700, 813, 1392
Bme18I GGWCC 2 cut(s) 659, 862
BmeT110I CYCGRG 1 cut(s) 582
BmgT120I GGNCC 2 cut(s) 659, 862
BmiI GGNNCC 1 cut(s) 542
BmrFI CCNGG 4 cut(s) 657, 700, 813, 1392
BmrI ACTGGG 1 cut(s) 888
BmuI ACTGGG 1 cut(s) 888
BpiI GAAGAC 2 cut(s) 1005, 1074
BplI GAGNNNNNCTC 2 cut(s) 185, 217
BpmI CTGGAG 1 cut(s) 1082
Bpu10I CCTNAGC 1 cut(s) 1247
Bpu1102I GCTNAGC 2 cut(s) 534, 1242
BpuEI CTTGAG 1 cut(s) 730
Bsa29I ATCGAT 1 cut(s) 873
BsaHI GRCGYC 1 cut(s) 213
BsaJI CCNNGG 7 cut(s) 243, 270, 300, 357, 439, 812, 1390
BsaWI WCCGGW 1 cut(s) 732
BsaXI ACNNNNNCTCC 6 cut(s) 62, 92, 182, 212, 375, 405
Bsc4I CCNNNNNNNGG 1 cut(s) 1397
Bse1I ACTGG 3 cut(s) 486, 504, 883
Bse21I CCTNAGG 1 cut(s) 840
Bse3DI GCAATG 1 cut(s) 461
BseAI TCCGGA 1 cut(s) 732
BseBI CCWGG 4 cut(s) 657, 700, 813, 1392
BseCI ATCGAT 1 cut(s) 873
BseDI CCNNGG 7 cut(s) 243, 270, 300, 357, 439, 812, 1390
BseGI GGATG 2 cut(s) 104, 850
BseLI CCNNNNNNNGG 1 cut(s) 1397
BseMI GCAATG 1 cut(s) 461
BseMII CTCAG 7 cut(s) 618, 656, 831, 1178, 1212, 1238, 1292
BseNI ACTGG 3 cut(s) 486, 504, 883
BseRI GAGGAG 5 cut(s) 70, 190, 396, 419, 469
BseX3I CGGCCG 2 cut(s) 249, 303
BseXI GCAGC 6 cut(s) 39, 247, 283, 336, 425, 908
BsgI GTGCAG 1 cut(s) 1063
Bsh1236I CGCG 4 cut(s) 254, 302, 359, 402
Bsh1285I CGRYCG 2 cut(s) 252, 306
BshFI GGCC 8 cut(s) 39, 251, 269, 275, 305, 575, 690, 1276
BshNI GGYRCC 1 cut(s) 540
BshVI ATCGAT 1 cut(s) 873
BsiEI CGRYCG 2 cut(s) 252, 306
BsiHKAI GWGCWC 4 cut(s) 583, 612, 787, 1264
BsiHKCI CYCGRG 1 cut(s) 582
BsiSI CCGG 1 cut(s) 733
BsiWI CGTACG 1 cut(s) 363
BslFI GGGAC 2 cut(s) 78, 321
BslI CCNNNNNNNGG 1 cut(s) 1397
BsmFI GGGAC 2 cut(s) 78, 321
BsmI GAATGC 2 cut(s) 1073, 1363
BsnI GGCC 8 cut(s) 39, 251, 269, 275, 305, 575, 690, 1276
BsoBI CYCGRG 1 cut(s) 582
Bsp1286I GDGCHC 4 cut(s) 583, 612, 787, 1264
Bsp13I TCCGGA 1 cut(s) 732
Bsp143I GATC 8 cut(s) 220, 600, 695, 749, 772, 797, 1334, 1394
Bsp1720I GCTNAGC 2 cut(s) 534, 1242
Bsp68I TCGCGA 1 cut(s) 402
BspANI GGCC 8 cut(s) 39, 251, 269, 275, 305, 575, 690, 1276
BspCNI CTCAG 7 cut(s) 617, 655, 832, 1179, 1211, 1239, 1291
BspDI ATCGAT 1 cut(s) 873
BspEI TCCGGA 1 cut(s) 732
BspFNI CGCG 4 cut(s) 254, 302, 359, 402
BspHI TCATGA 1 cut(s) 775
BspLI GGNNCC 1 cut(s) 542
BspMAI CTGCAG 1 cut(s) 823
BspPI GGATC 3 cut(s) 215, 690, 1402
BspT107I GGYRCC 1 cut(s) 540
BsrDI GCAATG 1 cut(s) 461
BsrI ACTGG 3 cut(s) 486, 504, 883
BssECI CCNNGG 7 cut(s) 243, 270, 300, 357, 439, 812, 1390
BssMI GATC 8 cut(s) 220, 600, 695, 749, 772, 797, 1334, 1394
BssNI GRCGYC 1 cut(s) 213
Bst2UI CCWGG 4 cut(s) 657, 700, 813, 1392
Bst4CI ACNGT 2 cut(s) 333, 1101
Bst6I CTCTTC 1 cut(s) 920
BstACI GRCGYC 1 cut(s) 213
BstAPI GCANNNNNTGC 1 cut(s) 467
BstC8I GCNNGC 6 cut(s) 234, 468, 567, 573, 1222, 1421
BstDSI CCRYGG 4 cut(s) 243, 300, 357, 439
BstF5I GGATG 2 cut(s) 104, 850
BstFNI CGCG 4 cut(s) 254, 302, 359, 402
BstHHI GCGC 2 cut(s) 117, 571
BstKTI GATC 8 cut(s) 223, 603, 698, 752, 775, 800, 1337, 1397
BstMBI GATC 8 cut(s) 220, 600, 695, 749, 772, 797, 1334, 1394
BstMCI CGRYCG 2 cut(s) 252, 306
BstNI CCWGG 4 cut(s) 657, 700, 813, 1392
BstNSI RCATGY 3 cut(s) 236, 1224, 1423
BstSCI CCNGG 4 cut(s) 655, 698, 811, 1390
BstSFI CTRYAG 4 cut(s) 139, 819, 1314, 1425
BstUI CGCG 4 cut(s) 254, 302, 359, 402
BstV1I GCAGC 6 cut(s) 39, 247, 283, 336, 425, 908
BstV2I GAAGAC 2 cut(s) 1005, 1074
BstX2I RGATCY 2 cut(s) 600, 1394
BstXI CCANNNNNNTGG 1 cut(s) 244
BstYI RGATCY 2 cut(s) 600, 1394
BstZI CGGCCG 2 cut(s) 249, 303
Bsu15I ATCGAT 1 cut(s) 873
Bsu36I CCTNAGG 1 cut(s) 840
BsuRI GGCC 8 cut(s) 39, 251, 269, 275, 305, 575, 690, 1276
BsuTUI ATCGAT 1 cut(s) 873
BtgI CCRYGG 4 cut(s) 243, 300, 357, 439
BtgZI GCGATG 2 cut(s) 223, 1182
BtsCI GGATG 2 cut(s) 104, 850
BtsI GCAGTG 1 cut(s) 828
BtsIMutI CAGTG 2 cut(s) 497, 828
BtuMI TCGCGA 1 cut(s) 402
Cac8I GCNNGC 6 cut(s) 234, 468, 567, 573, 1222, 1421
CaiI CAGNNNCTG 3 cut(s) 263, 818, 1397
CciI TCATGA 1 cut(s) 775
CciNI GCGGCCGC 1 cut(s) 249
CfoI GCGC 2 cut(s) 117, 571
Cfr13I GGNCC 2 cut(s) 659, 862
Cfr42I CCGCGG 2 cut(s) 303, 360
ClaI ATCGAT 1 cut(s) 873
CseI GACGC 1 cut(s) 1079
CsiI ACCWGGT 1 cut(s) 655
Csp6I GTAC 5 cut(s) 364, 541, 705, 1195, 1309
CviAII CATG 8 cut(s) 233, 686, 713, 776, 801, 1216, 1221, 1420
CviQI GTAC 5 cut(s) 364, 541, 705, 1195, 1309
DpnI GATC 8 cut(s) 222, 602, 697, 751, 774, 799, 1336, 1396
DpnII GATC 8 cut(s) 220, 600, 695, 749, 772, 797, 1334, 1394
DraIII CACNNNGTG 1 cut(s) 1259
EaeI YGGCCR 3 cut(s) 249, 267, 303
EagI CGGCCG 2 cut(s) 249, 303
Eam1104I CTCTTC 1 cut(s) 920
EarI CTCTTC 1 cut(s) 920
EciI GGCGGA 2 cut(s) 302, 393
Ecl136II GAGCTC 3 cut(s) 581, 610, 785
EclXI CGGCCG 2 cut(s) 249, 303
Eco147I AGGCCT 1 cut(s) 1276
Eco24I GRGCYC 3 cut(s) 583, 612, 787
Eco47I GGWCC 2 cut(s) 659, 862
Eco52I CGGCCG 2 cut(s) 249, 303
Eco53kI GAGCTC 3 cut(s) 581, 610, 785
Eco57I CTGAAG 1 cut(s) 927
Eco81I CCTNAGG 1 cut(s) 840
Eco88I CYCGRG 1 cut(s) 582
EcoICRI GAGCTC 3 cut(s) 581, 610, 785
EcoO109I RGGNCCY 1 cut(s) 862
EcoRII CCWGG 4 cut(s) 655, 698, 811, 1390
EcoT38I GRGCYC 3 cut(s) 583, 612, 787
FaeI CATG 8 cut(s) 236, 689, 716, 779, 804, 1219, 1224, 1423
FalI AAGNNNNNCTT 2 cut(s) 997, 1029
FaqI GGGAC 2 cut(s) 78, 321
FatI CATG 8 cut(s) 232, 685, 712, 775, 800, 1215, 1220, 1419
FauI CCCGC 2 cut(s) 193, 364
FbaI TGATCA 1 cut(s) 772
FokI GGATG 2 cut(s) 91, 857
FriOI GRGCYC 3 cut(s) 583, 612, 787
FspBI CTAG 3 cut(s) 15, 1053, 1293
GlaI GCGC 2 cut(s) 116, 570
GsuI CTGGAG 1 cut(s) 1082
HaeIII GGCC 8 cut(s) 39, 251, 269, 275, 305, 575, 690, 1276
HapII CCGG 1 cut(s) 733
HgaI GACGC 1 cut(s) 1079
HhaI GCGC 2 cut(s) 117, 571
Hin1I GRCGYC 1 cut(s) 213
Hin1II CATG 8 cut(s) 236, 689, 716, 779, 804, 1219, 1224, 1423
Hin6I GCGC 2 cut(s) 115, 569
HinP1I GCGC 2 cut(s) 115, 569
HincII GTYRAC 1 cut(s) 1035
HindII GTYRAC 1 cut(s) 1035
HindIII AAGCTT 2 cut(s) 9, 1412
HinfI GANTC 5 cut(s) 194, 397, 646, 980, 1328
HpaI GTTAAC 1 cut(s) 1035
HpaII CCGG 1 cut(s) 733
HphI GGTGA 6 cut(s) 78, 310, 496, 641, 782, 1337
Hpy166II GTNNAC 1 cut(s) 1035
Hpy188I TCNGA 9 cut(s) 52, 225, 607, 645, 793, 946, 996, 1201, 1266
Hpy188III TCNNGA 8 cut(s) 15, 401, 733, 747, 776, 839, 1053, 1332
Hpy8I GTNNAC 1 cut(s) 1035
Hpy99I CGWCG 3 cut(s) 215, 218, 311
HpyAV CCTTC 1 cut(s) 701
HpyCH4III ACNGT 2 cut(s) 333, 1101
HpyCH4IV ACGT 3 cut(s) 213, 366, 904
HpyCH4V TGCA 8 cut(s) 470, 665, 821, 896, 1080, 1224, 1343, 1363
HpySE526I ACGT 3 cut(s) 213, 366, 904
Hsp92I GRCGYC 1 cut(s) 213
Hsp92II CATG 8 cut(s) 236, 689, 716, 779, 804, 1219, 1224, 1423
HspAI GCGC 2 cut(s) 115, 569
Kpn2I TCCGGA 1 cut(s) 732
KpnI GGTACC 1 cut(s) 544
Ksp22I TGATCA 1 cut(s) 772
KspAI GTTAAC 1 cut(s) 1035
KspI CCGCGG 2 cut(s) 303, 360
Kzo9I GATC 8 cut(s) 220, 600, 695, 749, 772, 797, 1334, 1394
LmnI GCTCC 3 cut(s) 123, 805, 1267
Lsp1109I GCAGC 6 cut(s) 39, 247, 283, 336, 425, 908
MabI ACCWGGT 1 cut(s) 655
MaeI CTAG 3 cut(s) 15, 1053, 1293
MaeII ACGT 3 cut(s) 213, 366, 904
MaeIII GTNAC 3 cut(s) 1181, 1251, 1430
MalI GATC 8 cut(s) 222, 602, 697, 751, 774, 799, 1336, 1396
MboI GATC 8 cut(s) 220, 600, 695, 749, 772, 797, 1334, 1394
MboII GAAGA 9 cut(s) 535, 630, 838, 862, 907, 1005, 1079, 1110, 1224
MflI RGATCY 2 cut(s) 600, 1394
MhlI GDGCHC 4 cut(s) 583, 612, 787, 1264
MluCI AATT 3 cut(s) 677, 1046, 1132
MlyI GAGTC 2 cut(s) 203, 974
MroI TCCGGA 1 cut(s) 732
MseI TTAA 2 cut(s) 473, 1034
MslI CAYNNNNRTG 1 cut(s) 242
MspA1I CMGCKG 8 cut(s) 188, 260, 278, 302, 327, 359, 416, 547
MspI CCGG 1 cut(s) 733
MspR9I CCNGG 4 cut(s) 657, 700, 813, 1392
Mva1269I GAATGC 2 cut(s) 1073, 1363
MvaI CCWGG 4 cut(s) 657, 700, 813, 1392
MvnI CGCG 4 cut(s) 254, 302, 359, 402
NdeII GATC 8 cut(s) 220, 600, 695, 749, 772, 797, 1334, 1394
NlaIII CATG 8 cut(s) 236, 689, 716, 779, 804, 1219, 1224, 1423
NlaIV GGNNCC 1 cut(s) 542
NmeAIII GCCGAG 2 cut(s) 15, 295
NmuCI GTSAC 1 cut(s) 1251
NotI GCGGCCGC 1 cut(s) 249
NruI TCGCGA 1 cut(s) 402
NspI RCATGY 3 cut(s) 236, 1224, 1423
PaeI GCATGC 3 cut(s) 236, 1224, 1423
PaeR7I CTCGAG 1 cut(s) 582
PagI TCATGA 1 cut(s) 775
PceI AGGCCT 1 cut(s) 1276
PcsI WCGNNNNNNNCGW 1 cut(s) 589
PctI GAATGC 2 cut(s) 1073, 1363
PfeI GAWTC 3 cut(s) 397, 646, 1328
Pfl23II CGTACG 1 cut(s) 363
PflFI GACNNNGTC 2 cut(s) 333, 860
PflMI CCANNNNNTGG 1 cut(s) 1397
PfoI TCCNGGA 1 cut(s) 698
PleI GAGTC 2 cut(s) 202, 974
PpsI GAGTC 2 cut(s) 202, 974
PpuMI RGGWCCY 1 cut(s) 862
Psp124BI GAGCTC 3 cut(s) 583, 612, 787
Psp5II RGGWCCY 1 cut(s) 862
Psp6I CCWGG 4 cut(s) 655, 698, 811, 1390
PspGI CCWGG 4 cut(s) 655, 698, 811, 1390
PspLI CGTACG 1 cut(s) 363
PspN4I GGNNCC 1 cut(s) 542
PspPI GGNCC 2 cut(s) 659, 862
PspPPI RGGWCCY 1 cut(s) 862
PspXI VCTCGAGB 1 cut(s) 582
PstI CTGCAG 1 cut(s) 823
PstNI CAGNNNCTG 3 cut(s) 263, 818, 1397
PsuI RGATCY 2 cut(s) 600, 1394
PsyI GACNNNGTC 2 cut(s) 333, 860
PvuII CAGCTG 2 cut(s) 260, 416
RruI TCGCGA 1 cut(s) 402
RsaI GTAC 5 cut(s) 365, 542, 706, 1196, 1310
RsaNI GTAC 5 cut(s) 364, 541, 705, 1195, 1309
RseI CAYNNNNRTG 1 cut(s) 242
SacI GAGCTC 3 cut(s) 583, 612, 787
SacII CCGCGG 2 cut(s) 303, 360
SaqAI TTAA 2 cut(s) 473, 1034
Sau3AI GATC 8 cut(s) 220, 600, 695, 749, 772, 797, 1334, 1394
Sau96I GGNCC 2 cut(s) 659, 862
SchI GAGTC 2 cut(s) 203, 974
ScrFI CCNGG 4 cut(s) 657, 700, 813, 1392
SduI GDGCHC 4 cut(s) 583, 612, 787, 1264
SexAI ACCWGGT 1 cut(s) 655
SfcI CTRYAG 4 cut(s) 139, 819, 1314, 1425
Sfr274I CTCGAG 1 cut(s) 582
Sfr303I CCGCGG 2 cut(s) 303, 360
SgrBI CCGCGG 2 cut(s) 303, 360
SinI GGWCC 2 cut(s) 659, 862
SlaI CTCGAG 1 cut(s) 582
SmiMI CAYNNNNRTG 1 cut(s) 242
SmlI CTYRAG 2 cut(s) 582, 745
SmoI CTYRAG 2 cut(s) 582, 745
SphI GCATGC 3 cut(s) 236, 1224, 1423
Sse9I AATT 3 cut(s) 677, 1046, 1132
SseBI AGGCCT 1 cut(s) 1276
SspI AATATT 1 cut(s) 561
SspMI CTAG 3 cut(s) 15, 1053, 1293
SstI GAGCTC 3 cut(s) 583, 612, 787
StuI AGGCCT 1 cut(s) 1276
StyD4I CCNGG 4 cut(s) 655, 698, 811, 1390
TaaI ACNGT 2 cut(s) 333, 1101
TaiI ACGT 3 cut(s) 216, 369, 907
TaqI TCGA 5 cut(s) 583, 694, 867, 873, 1175
TasI AATT 3 cut(s) 677, 1046, 1132
TatI WGTACW 1 cut(s) 704
TauI GCSGC 9 cut(s) 251, 254, 278, 287, 290, 302, 305, 362, 434
TfiI GAWTC 3 cut(s) 397, 646, 1328
Tru1I TTAA 2 cut(s) 473, 1034
Tru9I TTAA 2 cut(s) 473, 1034
TscAI CASTG 2 cut(s) 504, 828
TseFI GTSAC 1 cut(s) 1251
TseI GCWGC 6 cut(s) 27, 260, 296, 324, 413, 896
Tsp45I GTSAC 1 cut(s) 1251
TspDTI ATGAA 2 cut(s) 711, 729
TspGWI ACGGA 2 cut(s) 428, 999
TspRI CASTG 2 cut(s) 504, 828
Tth111I GACNNNGTC 2 cut(s) 333, 860
Van91I CCANNNNNTGG 1 cut(s) 1397
VpaK11BI GGWCC 2 cut(s) 659, 862
XapI RAATTY 2 cut(s) 677, 1046
XbaI TCTAGA 2 cut(s) 14, 1052
XceI RCATGY 3 cut(s) 236, 1224, 1423
XhoI CTCGAG 1 cut(s) 582
XspI CTAG 3 cut(s) 15, 1053, 1293
ZraI GACGTC 1 cut(s) 214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.