Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0006516

Physical Location & Seq

Genomic Coordinates Reverse (-)

36088701 .. 36093610

Gene Structure 4910 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0330100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2421 bp

ATGAGTTCCCACTACATGACGCCGGAGCCACCCTCGGCCTCGGGTCGGAGCTCCGAGAAGATGAGCCTGCCGACACTTCAATCCAAGATGAAGTGCGACCCGGAAGGCTACGAGACGGAGCTCCTCCTTGTGTACAACCAATTCAAGTCGTCGCTGGAGCTCTTCAAGCAACAAGCCGATCTCGGATTCAAGTCCGTCACCGGCAGCGGCGGCAGCGACCCCACCGTGGCCAAGGACCTCGCCGACCGGGCATTGTTTCTCGCCCACGTCACCCCCTTTTACCTGGCCCAATTGGCCCAATTCCCCTCACAGCTCTCTGAGTTTCTGCACTCCTCCGCCCGAACGCTTCCCTCTGGTCTCAGATTGCATGTTGCGCAAGCTCTCATTCTTCTTATGAACAGAAAGATGGTGGATATTGCAGACAATCTAGGTTTGTTCATGGAGATACAGACTTATGGCGATAAGGCTTTAAAGACCCTGGCATACAATCACGTCATACATAGCATAAAGCGAATGAATATGAAGCATAAGAACGAAGCTAAGAATCGGGTGCTTCAGAATGTCTTGTTTCGGATGCTACAGCTAGAGGATGAAACAAAAGCAAAGAGAGCACTTATCACTCTGCGTGAGCTTCACCGGAGAAGGGTGTGGTTTGATGAAAATACAGCGAACGCAATCTGCTCAGCATGTTTTCATCCATCGTCGAGGATAATGATTGCTTGTCTCTCATTTCTGCTTGATTACGAGAAGATTGAGGAGGAGGATGATAGTGATGTGTCAAGTAGTGATGAGGACACTCCTATTAAATCTCATCTAGCCATTAATAGAGAGGATATATATAAGGCGCACCATAAGGGTACACTTGCTAGCAAGAAGAAAAAGAAAGCAAAACTGCAGCGTGCCATCCGTAGCCTGAAAAAACAGCAACGCGTAACATCAGAAAAAAGTACTTCAAATTATCATACGCCACTTAATCATTTGAGAGATCCACAGGAATTCGCTGAGAAGCTATTCTCCCGTCTTCAAAATAGTACAAGAGTTGAACGCTTTGAGGTCAAAATGATGATGTTGAAAGTAGTTGCTCGAACTATTGGGCTTCATCGCTTGGTTCTGTTGAACTTTTATCCTTATTTTATCAACTACATTACGCCTCATCAAAATGGTGTCACTGAATTACTCGCTGCAGCAGTACAGGCCTGCCATGATATGGTTCCTCCTGATGCAGTTGAACCACTTTTCAAACAGATAGTTAACAAATTTATAGATGATCGTGCACAGCCAGAGGCCATAGCTGTTGGACTGAATACAACAAGGGAAATTTCTTTACGAATGCCTTTGTTGATGACAGAAGATTTGCTGCAAGATCTTGCATTATATAAGAAATCACATACAAAAGCAGTGTCAGTAGCAGCCCGTTCGCTTATTGGCTTATTCAGAGAGCTTAACCCCTCGCTGCTGATTAAGAAGGATCGTGGTCGCCAACATGTTGACTCAAAGGCAAGGCCAAAAGCGTATGGAGAAGTCGATGTACTTAGCAATGTTCCTGGTCTTGATTTACTAAAACATGATGATGACAATGGGGAGAGTGATGATGATGAACCTTCAGTAAGGGGCACTGTTGAGATGGTAGCTTCCAGTGATGATGAAGGCTTGCAAATAACCAACACTGATAGTGGAAGTGAAGATGACAACATGATATCTGAAGATGGTGATGAGATAGATGAGAATGACAGTGATGTGAGTGGTGATGAGGATGAGGTGGAAGCGGAGGATGAAGATGAGGATGAGGATGAGGAAGAGAATACAGAGGATGAGGAGGAAGAATTTGACAATAATGATGCCAAAGATGGTGGATCTGGAGTAAAAGAAAACATAGCAAAAAAGAGGAAATTTGCTGATTTTGATACACAACTTAATGACGCTGAAGCAAGTCTTAGGACTTTGAAGAGATTAGCCAAAGAAAATATGGGTCCTGCTCCATCAGACTCGACAGATGGTTTTCTTTCTAATGAGGACTTCCGGAGGATTAAGGAATTAAAGGCAAAGCAGCGATTGGCTCAGCAGGGGTTGTTGAAAAAGAGCTCAGATGCGAAGTCAACAGCATTCAAGATTCCCACTTCTGATGAATTAAGCATTAAGCGAATAGATCCTGCTAAGCTTGAAGTCCATGTAAAAAGAAGAATGACCAAGGAGGAGAAGCTGGCATTAGTGAAAGCAGGGAGGGAGGATAGAGGGAAGTACATGGCTAAAGCTGCTGTAAAACAGAAGAAGTCGGGAGGCCTGAGCAATAAGCAGAAGGAACATAAGAAGGCTATGCCACTTGTTGCAAAGAGGGCAAAGGTAGCTAAATCTCGAGTGGAAAAACGCAAAAAGCAGCAGCTTTCTGGCAAAAATTTCCGAGGGAAGAAAGCATGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

806

Amino Acids

90.97

Weight (kDa)

7.1

Isoelectric Point (pI)

49.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SDA1_HEAT	PF08158	86 - 462	7.9e-126	SDA1, HEAT repeat
SDA1_C	PF21638	759 - 804	1.8e-07	SDA1, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006516)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08690 AT4G08690 AT4G08690
fragaria_vesca	FvH4_5g37870 FvH4_5g37870 FvH4_5g37870
malus_domestica	MD08G1179500.v1.1 MD15G1364800.v1.1
prunus_persica	Prupe.1G512800_v2.0.a1
pyrus_communis	pycom08g15370 pycom15g32720
rosa_chinensis	RchiOBHm_Chr7g0239851
rosa_laevigata	RLG00000000725
rosa_multiflora	Rmu_co8357749.1_g000001
rosa_roxburghii	Rroxscaffold_3G00220760
rosa_rugosa	Rorug07G0330100 Rorug07G0330200 Rorug07G0330300 Rorug07G0330400 Rorug07G0330500 Rorug07G0330500
rosa_samantha	Rh7AG484000 Rh7BG457100 Rh7CG501500 Rh7DG469700
rosa_wichuraiana	Rw7G040600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	375
AccB7I	CCANNNNNTGG	1 cut(s)	1207
AccII	CGCG	1 cut(s)	930
AccIII	TCCGGA	1 cut(s)	2019
AciI	CCGC	4 cut(s)	207, 210, 336, 1766
AclWI	GGATC	4 cut(s)	980, 1476, 1861, 2141
AcoI	YGGCCR	1 cut(s)	228
AcsI	RAATTY	6 cut(s)	995, 1256, 1317, 1823, 1889, 2392
AcuI	CTGAAG	4 cut(s)	539, 1587, 1722, 1944
AcyI	GRCGYC	1 cut(s)	20
AfaI	GTAC	7 cut(s)	134, 859, 949, 1033, 1191, 1530, 2240
AfiI	CCNNNNNNNGG	4 cut(s)	45, 226, 643, 1207
AflIII	ACRYGT	2 cut(s)	928, 1483
AjiI	CACGTC	2 cut(s)	268, 493
AjnI	CCWGG	3 cut(s)	282, 477, 1543
Alw21I	GWGCWC	6 cut(s)	53, 123, 162, 613, 1276, 2084
Alw26I	GTCTC	3 cut(s)	107, 362, 728
Alw44I	GTGCAC	1 cut(s)	1272
AlwI	GGATC	4 cut(s)	980, 1476, 1861, 2141
Ama87I	CYCGRG	2 cut(s)	40, 2352
Aor13HI	TCCGGA	1 cut(s)	2019
AoxI	GGCC	8 cut(s)	36, 228, 285, 294, 1194, 1284, 1502, 2278
ApaLI	GTGCAC	1 cut(s)	1272
ApoI	RAATTY	6 cut(s)	995, 1256, 1317, 1823, 1889, 2392
ArsI	GACNNNNNNTTYG	4 cut(s)	1336, 1368, 1385, 1417
AseI	ATTAAT	1 cut(s)	822
Asp700I	GAANNNNTTC	1 cut(s)	1010
AspLEI	GCGC	2 cut(s)	376, 847
AspS9I	GGNCC	4 cut(s)	235, 286, 295, 1970
AsuC2I	CCSGG	2 cut(s)	101, 248
AsuHPI	GGTGA	5 cut(s)	190, 262, 626, 1721, 1757
AsuNHI	GCTAGC	1 cut(s)	866
AvaI	CYCGRG	2 cut(s)	40, 2352
AvaII	GGWCC	2 cut(s)	235, 1970
BaeGI	GKGCMC	2 cut(s)	1276, 1616
BalI	TGGCCA	1 cut(s)	230
BanII	GRGCYC	4 cut(s)	53, 123, 162, 2084
BarI	GAAGNNNNNNTAC	2 cut(s)	1512, 1544
BbsI	GAAGAC	1 cut(s)	1013
Bbv12I	GWGCWC	6 cut(s)	53, 123, 162, 613, 1276, 2084
BccI	CCATC	8 cut(s)	400, 706, 911, 1618, 1700, 1841, 1987, 1988
BcgI	CGANNNNNNTGC	2 cut(s)	1398, 1432
BciT130I	CCWGG	3 cut(s)	284, 479, 1545
BcnI	CCSGG	2 cut(s)	101, 248
BcoDI	GTCTC	3 cut(s)	107, 362, 728
BfaI	CTAG	4 cut(s)	428, 584, 815, 867
BfmI	CTRYAG	3 cut(s)	578, 893, 1182
BglI	GCCNNNNNGGC	2 cut(s)	248, 293
BglII	AGATCT	1 cut(s)	1363
BlpI	GCTNAGC	3 cut(s)	682, 2058, 2154
BmcAI	AGTACT	1 cut(s)	949
Bme1390I	CCNGG	5 cut(s)	101, 248, 284, 479, 1545
Bme18I	GGWCC	2 cut(s)	235, 1970
BmeT110I	CYCGRG	2 cut(s)	40, 2352
BmgBI	CACGTC	2 cut(s)	268, 493
BmgT120I	GGNCC	4 cut(s)	235, 286, 295, 1970
BmiI	GGNNCC	3 cut(s)	27, 1212, 1971
BmrFI	CCNGG	5 cut(s)	101, 248, 284, 479, 1545
BmsI	GCATC	4 cut(s)	564, 1210, 1828, 2077
BmtI	GCTAGC	1 cut(s)	870
BpiI	GAAGAC	1 cut(s)	1013
BplI	GAGNNNNNCTC	2 cut(s)	17, 49
BpmI	CTGGAG	2 cut(s)	176, 1878
Bpu10I	CCTNAGC	1 cut(s)	2282
Bpu1102I	GCTNAGC	3 cut(s)	682, 2058, 2154
BpuMI	CCSGG	2 cut(s)	101, 248
BsaHI	GRCGYC	1 cut(s)	20
BsaI	GGTCTC	1 cut(s)	362
BsaJI	CCNNGG	7 cut(s)	33, 39, 225, 231, 477, 2187, 2398
BsaWI	WCCGGW	2 cut(s)	636, 2019
Bsc4I	CCNNNNNNNGG	4 cut(s)	45, 226, 643, 1207
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	1 cut(s)	1635
Bse3DI	GCAATG	1 cut(s)	1543
BseAI	TCCGGA	1 cut(s)	2019
BseBI	CCWGG	3 cut(s)	284, 479, 1545
BseDI	CCNNGG	7 cut(s)	33, 39, 225, 231, 477, 2187, 2398
BseLI	CCNNNNNNNGG	4 cut(s)	45, 226, 643, 1207
BseMI	GCAATG	1 cut(s)	1543
BseMII	CTCAG	7 cut(s)	309, 373, 696, 993, 2072, 2097, 2273
BseNI	ACTGG	1 cut(s)	1635
BseRI	GAGGAG	6 cut(s)	113, 322, 770, 773, 1829, 2207
BseSI	GKGCMC	2 cut(s)	1276, 1616
BsgI	GTGCAG	1 cut(s)	311
Bsh1236I	CGCG	1 cut(s)	930
Bsh1285I	CGRYCG	1 cut(s)	247
BshFI	GGCC	8 cut(s)	38, 230, 287, 296, 1196, 1286, 1504, 2280
BsiEI	CGRYCG	1 cut(s)	247
BsiHKAI	GWGCWC	6 cut(s)	53, 123, 162, 613, 1276, 2084
BsiHKCI	CYCGRG	2 cut(s)	40, 2352
BsiSI	CCGG	6 cut(s)	23, 101, 201, 247, 637, 2020
BslI	CCNNNNNNNGG	4 cut(s)	45, 226, 643, 1207
BsmAI	GTCTC	3 cut(s)	107, 362, 728
BsmBI	CGTCTC	1 cut(s)	107
BsmI	GAATGC	2 cut(s)	1335, 2102
BsnI	GGCC	8 cut(s)	38, 230, 287, 296, 1196, 1286, 1504, 2280
Bso31I	GGTCTC	1 cut(s)	362
BsoBI	CYCGRG	2 cut(s)	40, 2352
Bsp1286I	GDGCHC	7 cut(s)	53, 123, 162, 613, 1276, 1616, 2084
Bsp13I	TCCGGA	1 cut(s)	2019
Bsp1407I	TGTACA	1 cut(s)	132
Bsp143I	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1853, 2146
Bsp1720I	GCTNAGC	3 cut(s)	682, 2058, 2154
BspACI	CCGC	4 cut(s)	207, 210, 336, 1766
BspANI	GGCC	8 cut(s)	38, 230, 287, 296, 1196, 1286, 1504, 2280
BspCNI	CTCAG	7 cut(s)	310, 372, 695, 994, 2071, 2096, 2274
BspEI	TCCGGA	1 cut(s)	2019
BspFNI	CGCG	1 cut(s)	930
BspLI	GGNNCC	3 cut(s)	27, 1212, 1971
BspMAI	CTGCAG	2 cut(s)	897, 1186
BspOI	GCTAGC	1 cut(s)	870
BspPI	GGATC	4 cut(s)	980, 1476, 1861, 2141
BspQI	GCTCTTC	1 cut(s)	167
BspTNI	GGTCTC	1 cut(s)	362
BsrDI	GCAATG	1 cut(s)	1543
BsrFI	RCCGGY	1 cut(s)	200
BsrGI	TGTACA	1 cut(s)	132
BsrI	ACTGG	1 cut(s)	1635
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	7 cut(s)	33, 39, 225, 231, 477, 2187, 2398
BssMI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1853, 2146
BssNI	GRCGYC	1 cut(s)	20
BssT1I	CCWWGG	2 cut(s)	231, 2187
Bst2UI	CCWGG	3 cut(s)	284, 479, 1545
Bst4CI	ACNGT	3 cut(s)	226, 1618, 1733
Bst6I	CTCTTC	3 cut(s)	167, 1791, 1940
BstACI	GRCGYC	1 cut(s)	20
BstAUI	TGTACA	1 cut(s)	132
BstC8I	GCNNGC	7 cut(s)	68, 378, 868, 900, 1198, 1652, 2202
BstDSI	CCRYGG	1 cut(s)	225
BstFNI	CGCG	1 cut(s)	930
BstHHI	GCGC	2 cut(s)	376, 847
BstKTI	GATC	7 cut(s)	181, 988, 1270, 1366, 1471, 1856, 2149
BstMAI	GTCTC	3 cut(s)	107, 362, 728
BstMBI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1853, 2146
BstMCI	CGRYCG	1 cut(s)	247
BstNI	CCWGG	3 cut(s)	284, 479, 1545
BstNSI	RCATGY	3 cut(s)	371, 690, 1487
BstSCI	CCNGG	5 cut(s)	99, 246, 282, 477, 1543
BstSFI	CTRYAG	3 cut(s)	578, 893, 1182
BstSLI	GKGCMC	2 cut(s)	1276, 1616
BstUI	CGCG	1 cut(s)	930
BstV2I	GAAGAC	1 cut(s)	1013
BstX2I	RGATCY	4 cut(s)	985, 1363, 1853, 2146
BstYI	RGATCY	4 cut(s)	985, 1363, 1853, 2146
BsuRI	GGCC	8 cut(s)	38, 230, 287, 296, 1196, 1286, 1504, 2280
BtgI	CCRYGG	1 cut(s)	225
BtgZI	GCGATG	1 cut(s)	1085
BtrI	CACGTC	2 cut(s)	268, 493
BtsI	GCAGTG	1 cut(s)	1404
BtsIMutI	CAGTG	6 cut(s)	1167, 1404, 1614, 1642, 1665, 1738
Cac8I	GCNNGC	7 cut(s)	68, 378, 868, 900, 1198, 1652, 2202
CfoI	GCGC	2 cut(s)	376, 847
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	4 cut(s)	235, 286, 295, 1970
CseI	GACGC	2 cut(s)	28, 1928
Csp6I	GTAC	7 cut(s)	133, 858, 948, 1032, 1190, 1529, 2239
CspCI	CAANNNNNGTGG	2 cut(s)	1831, 1866
CviQI	GTAC	7 cut(s)	133, 858, 948, 1032, 1190, 1529, 2239
DpnI	GATC	7 cut(s)	180, 987, 1269, 1365, 1470, 1855, 2148
DpnII	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1853, 2146
DraI	TTTAAA	1 cut(s)	471
EaeI	YGGCCR	1 cut(s)	228
Eam1104I	CTCTTC	3 cut(s)	167, 1791, 1940
EarI	CTCTTC	3 cut(s)	167, 1791, 1940
EciI	GGCGGA	1 cut(s)	325
Ecl136II	GAGCTC	4 cut(s)	51, 121, 160, 2082
Eco130I	CCWWGG	2 cut(s)	231, 2187
Eco147I	AGGCCT	2 cut(s)	1196, 2280
Eco24I	GRGCYC	4 cut(s)	53, 123, 162, 2084
Eco31I	GGTCTC	1 cut(s)	362
Eco32I	GATATC	1 cut(s)	1698
Eco47I	GGWCC	2 cut(s)	235, 1970
Eco53kI	GAGCTC	4 cut(s)	51, 121, 160, 2082
Eco57I	CTGAAG	4 cut(s)	539, 1587, 1722, 1944
Eco88I	CYCGRG	2 cut(s)	40, 2352
EcoICRI	GAGCTC	4 cut(s)	51, 121, 160, 2082
EcoO109I	RGGNCCY	2 cut(s)	235, 1970
EcoRI	GAATTC	1 cut(s)	995
EcoRII	CCWGG	3 cut(s)	282, 477, 1543
EcoRV	GATATC	1 cut(s)	1698
EcoT14I	CCWWGG	2 cut(s)	231, 2187
EcoT38I	GRGCYC	4 cut(s)	53, 123, 162, 2084
ErhI	CCWWGG	2 cut(s)	231, 2187
Esp3I	CGTCTC	1 cut(s)	107
FalI	AAGNNNNNCTT	2 cut(s)	1917, 1949
FriOI	GRGCYC	4 cut(s)	53, 123, 162, 2084
FspBI	CTAG	4 cut(s)	428, 584, 815, 867
FspI	TGCGCA	1 cut(s)	375
GlaI	GCGC	2 cut(s)	375, 846
GsuI	CTGGAG	2 cut(s)	176, 1878
HaeIII	GGCC	8 cut(s)	38, 230, 287, 296, 1196, 1286, 1504, 2280
HapII	CCGG	6 cut(s)	23, 101, 201, 247, 637, 2020
HgaI	GACGC	2 cut(s)	28, 1928
HhaI	GCGC	2 cut(s)	376, 847
Hin1I	GRCGYC	1 cut(s)	20
Hin6I	GCGC	2 cut(s)	374, 845
HinP1I	GCGC	2 cut(s)	374, 845
HincII	GTYRAC	3 cut(s)	1252, 1489, 2097
HindII	GTYRAC	3 cut(s)	1252, 1489, 2097
HindIII	AAGCTT	1 cut(s)	2156
HinfI	GANTC	5 cut(s)	186, 544, 1490, 1985, 2110
HpaI	GTTAAC	1 cut(s)	1252
HpaII	CCGG	6 cut(s)	23, 101, 201, 247, 637, 2020
HphI	GGTGA	5 cut(s)	190, 262, 626, 1721, 1757
Hpy166II	GTNNAC	6 cut(s)	133, 860, 1252, 1274, 1489, 2097
Hpy188III	TCNNGA	7 cut(s)	1217, 1550, 1857, 2020, 2107, 2274, 2352
Hpy8I	GTNNAC	6 cut(s)	133, 860, 1252, 1274, 1489, 2097
Hpy99I	CGWCG	2 cut(s)	154, 706
HpyAV	CCTTC	7 cut(s)	98, 636, 1459, 1611, 1640, 2290, 2302
HpyCH4III	ACNGT	3 cut(s)	226, 1618, 1733
HpyCH4IV	ACGT	2 cut(s)	267, 492
HpySE526I	ACGT	2 cut(s)	267, 492
Hsp92I	GRCGYC	1 cut(s)	20
HspAI	GCGC	2 cut(s)	374, 845
Kpn2I	TCCGGA	1 cut(s)	2019
KspAI	GTTAAC	1 cut(s)	1252
Kzo9I	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1853, 2146
LguI	GCTCTTC	1 cut(s)	167
LmnI	GCTCC	7 cut(s)	25, 48, 56, 118, 126, 157, 1981
LweI	GCATC	4 cut(s)	564, 1210, 1828, 2077
MaeI	CTAG	4 cut(s)	428, 584, 815, 867
MaeII	ACGT	2 cut(s)	267, 492
MaeIII	GTNAC	4 cut(s)	196, 268, 931, 1165
MalI	GATC	7 cut(s)	180, 987, 1269, 1365, 1470, 1855, 2148
MboI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1853, 2146
MfeI	CAATTG	1 cut(s)	290
MflI	RGATCY	4 cut(s)	985, 1363, 1853, 2146
MhlI	GDGCHC	7 cut(s)	53, 123, 162, 613, 1276, 1616, 2084
MlsI	TGGCCA	1 cut(s)	230
MluI	ACGCGT	1 cut(s)	928
MluNI	TGGCCA	1 cut(s)	230
MlyI	GAGTC	2 cut(s)	1484, 1979
MmeI	TCCRAC	2 cut(s)	26, 1276
Mox20I	TGGCCA	1 cut(s)	230
MroI	TCCGGA	1 cut(s)	2019
MroXI	GAANNNNTTC	1 cut(s)	1010
MscI	TGGCCA	1 cut(s)	230
MslI	CAYNNNNRTG	3 cut(s)	1158, 1569, 2416
Msp20I	TGGCCA	1 cut(s)	230
MspA1I	CMGCKG	1 cut(s)	207
MspI	CCGG	6 cut(s)	23, 101, 201, 247, 637, 2020
MspR9I	CCNGG	5 cut(s)	101, 248, 284, 479, 1545
MunI	CAATTG	1 cut(s)	290
Mva1269I	GAATGC	2 cut(s)	1335, 2102
MvaI	CCWGG	3 cut(s)	284, 479, 1545
MvnI	CGCG	1 cut(s)	930
NciI	CCSGG	2 cut(s)	101, 248
NdeII	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1853, 2146
NheI	GCTAGC	1 cut(s)	866
NlaIV	GGNNCC	3 cut(s)	27, 1212, 1971
NmeAIII	GCCGAG	1 cut(s)	14
NmuCI	GTSAC	3 cut(s)	196, 268, 1165
NsbI	TGCGCA	1 cut(s)	375
NspI	RCATGY	3 cut(s)	371, 690, 1487
PaeR7I	CTCGAG	1 cut(s)	2352
PceI	AGGCCT	2 cut(s)	1196, 2280
PciI	ACATGT	1 cut(s)	1483
PciSI	GCTCTTC	1 cut(s)	167
PctI	GAATGC	2 cut(s)	1335, 2102
PdmI	GAANNNNTTC	1 cut(s)	1010
PfeI	GAWTC	3 cut(s)	186, 544, 2110
PflMI	CCANNNNNTGG	1 cut(s)	1207
PleI	GAGTC	2 cut(s)	1484, 1979
PpsI	GAGTC	2 cut(s)	1484, 1979
PpuMI	RGGWCCY	2 cut(s)	235, 1970
PscI	ACATGT	1 cut(s)	1483
PshBI	ATTAAT	1 cut(s)	822
Psp124BI	GAGCTC	4 cut(s)	53, 123, 162, 2084
Psp5II	RGGWCCY	2 cut(s)	235, 1970
Psp6I	CCWGG	3 cut(s)	282, 477, 1543
PspGI	CCWGG	3 cut(s)	282, 477, 1543
PspN4I	GGNNCC	3 cut(s)	27, 1212, 1971
PspPI	GGNCC	4 cut(s)	235, 286, 295, 1970
PspPPI	RGGWCCY	2 cut(s)	235, 1970
PstI	CTGCAG	2 cut(s)	897, 1186
PsuI	RGATCY	4 cut(s)	985, 1363, 1853, 2146
RsaI	GTAC	7 cut(s)	134, 859, 949, 1033, 1191, 1530, 2240
RsaNI	GTAC	7 cut(s)	133, 858, 948, 1032, 1190, 1529, 2239
RseI	CAYNNNNRTG	3 cut(s)	1158, 1569, 2416
SacI	GAGCTC	4 cut(s)	53, 123, 162, 2084
SapI	GCTCTTC	1 cut(s)	167
Sau3AI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1853, 2146
Sau96I	GGNCC	4 cut(s)	235, 286, 295, 1970
ScaI	AGTACT	1 cut(s)	949
SchI	GAGTC	2 cut(s)	1484, 1979
ScrFI	CCNGG	5 cut(s)	101, 248, 284, 479, 1545
SduI	GDGCHC	7 cut(s)	53, 123, 162, 613, 1276, 1616, 2084
SfaNI	GCATC	4 cut(s)	564, 1210, 1828, 2077
SfcI	CTRYAG	3 cut(s)	578, 893, 1182
SfiI	GGCCNNNNNGGCC	1 cut(s)	293
Sfr274I	CTCGAG	1 cut(s)	2352
SinI	GGWCC	2 cut(s)	235, 1970
SlaI	CTCGAG	1 cut(s)	2352
SmiMI	CAYNNNNRTG	3 cut(s)	1158, 1569, 2416
SmlI	CTYRAG	1 cut(s)	2352
SmoI	CTYRAG	1 cut(s)	2352
SseBI	AGGCCT	2 cut(s)	1196, 2280
SsiI	CCGC	4 cut(s)	207, 210, 336, 1766
SspMI	CTAG	4 cut(s)	428, 584, 815, 867
SstI	GAGCTC	4 cut(s)	53, 123, 162, 2084
StuI	AGGCCT	2 cut(s)	1196, 2280
StyD4I	CCNGG	5 cut(s)	99, 246, 282, 477, 1543
StyI	CCWWGG	2 cut(s)	231, 2187
TaaI	ACNGT	3 cut(s)	226, 1618, 1733
TaiI	ACGT	2 cut(s)	270, 495
TaqI	TCGA	5 cut(s)	704, 1084, 1524, 1988, 2353
TatI	WGTACW	6 cut(s)	132, 947, 1031, 1189, 1528, 2238
TauI	GCSGC	2 cut(s)	210, 213
TfiI	GAWTC	3 cut(s)	186, 544, 2110
TscAI	CASTG	6 cut(s)	1174, 1404, 1621, 1642, 1672, 1738
TseFI	GTSAC	3 cut(s)	196, 268, 1165
Tsp45I	GTSAC	3 cut(s)	196, 268, 1165
TspGWI	ACGGA	3 cut(s)	131, 184, 896
TspRI	CASTG	6 cut(s)	1174, 1404, 1621, 1642, 1672, 1738
Van91I	CCANNNNNTGG	1 cut(s)	1207
VneI	GTGCAC	1 cut(s)	1272
VpaK11BI	GGWCC	2 cut(s)	235, 1970
VspI	ATTAAT	1 cut(s)	822
XapI	RAATTY	6 cut(s)	995, 1256, 1317, 1823, 1889, 2392
XceI	RCATGY	3 cut(s)	371, 690, 1487
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1963
XhoI	CTCGAG	1 cut(s)	2352
XmnI	GAANNNNTTC	1 cut(s)	1010
XspI	CTAG	4 cut(s)	428, 584, 815, 867
ZrmI	AGTACT	1 cut(s)	949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.