FIZZY-related
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000017291 |
| rosa_rugosa | Rorug04G0289000 Rorug06G0268400 |
| rosa_samantha | Rh1AG078100 Rh1BG008500 Rh1CG013500 Rh2AG169000 Rh2AG169100 Rh2AG169500 Rh2AG169600 Rh2BG419300 Rh2CG174800 Rh2CG175000 Rh2CG175100 Rh2DG174500 Rh2DG175000 Rh3DG074800 |
| rosa_wichuraiana | Rw2G013260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 167 |
| AfaI | GTAC | 1 cut(s) | 384 |
| AgsI | TTSAA | 1 cut(s) | 91 |
| AluBI | AGCT | 4 cut(s) | 81, 124, 197, 250 |
| AluI | AGCT | 4 cut(s) | 81, 124, 197, 250 |
| AoxI | GGCC | 1 cut(s) | 23 |
| ApoI | RAATTY | 1 cut(s) | 167 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 101 |
| AsuHPI | GGTGA | 4 cut(s) | 109, 148, 193, 291 |
| BccI | CCATC | 1 cut(s) | 302 |
| BclI | TGATCA | 1 cut(s) | 234 |
| BmsI | GCATC | 1 cut(s) | 152 |
| BoxI | GACNNNNGTC | 1 cut(s) | 317 |
| BseMII | CTCAG | 2 cut(s) | 392, 413 |
| BseYI | CCCAGC | 1 cut(s) | 43 |
| BshFI | GGCC | 1 cut(s) | 25 |
| BsnI | GGCC | 1 cut(s) | 25 |
| Bsp143I | GATC | 2 cut(s) | 29, 234 |
| BspANI | GGCC | 1 cut(s) | 25 |
| BspCNI | CTCAG | 2 cut(s) | 391, 412 |
| BssMI | GATC | 2 cut(s) | 29, 234 |
| Bst4CI | ACNGT | 1 cut(s) | 66 |
| BstC8I | GCNNGC | 1 cut(s) | 252 |
| BstDEI | CTNAG | 3 cut(s) | 344, 378, 399 |
| BstKTI | GATC | 2 cut(s) | 32, 237 |
| BstMBI | GATC | 2 cut(s) | 29, 234 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 78, 412 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 317 |
| BsuRI | GGCC | 1 cut(s) | 25 |
| BtsIMutI | CAGTG | 2 cut(s) | 153, 407 |
| Cac8I | GCNNGC | 1 cut(s) | 252 |
| Csp6I | GTAC | 1 cut(s) | 383 |
| CviAII | CATG | 1 cut(s) | 322 |
| CviJI | RGCY | 8 cut(s) | 25, 81, 124, 197, 214, 250, 267, 406 |
| CviKI_1 | RGCY | 8 cut(s) | 25, 81, 124, 197, 214, 250, 267, 406 |
| CviQI | GTAC | 1 cut(s) | 383 |
| DdeI | CTNAG | 3 cut(s) | 344, 378, 399 |
| DpnI | GATC | 2 cut(s) | 31, 236 |
| DpnII | GATC | 2 cut(s) | 29, 234 |
| Eco32I | GATATC | 1 cut(s) | 186 |
| EcoRV | GATATC | 1 cut(s) | 186 |
| FaeI | CATG | 1 cut(s) | 325 |
| FaiI | YATR | 8 cut(s) | 74, 101, 226, 228, 270, 274, 276, 323 |
| FatI | CATG | 1 cut(s) | 321 |
| FbaI | TGATCA | 1 cut(s) | 234 |
| GsaI | CCCAGC | 1 cut(s) | 47 |
| HaeIII | GGCC | 1 cut(s) | 25 |
| Hin1II | CATG | 1 cut(s) | 325 |
| HindIII | AAGCTT | 2 cut(s) | 79, 122 |
| HinfI | GANTC | 1 cut(s) | 59 |
| HphI | GGTGA | 4 cut(s) | 109, 148, 193, 291 |
| Hpy166II | GTNNAC | 1 cut(s) | 151 |
| Hpy188I | TCNGA | 1 cut(s) | 234 |
| Hpy8I | GTNNAC | 1 cut(s) | 151 |
| HpyAV | CCTTC | 1 cut(s) | 375 |
| HpyCH4III | ACNGT | 1 cut(s) | 66 |
| HpyCH4IV | ACGT | 1 cut(s) | 86 |
| HpyCH4V | TGCA | 1 cut(s) | 143 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 78, 412 |
| HpyF3I | CTNAG | 3 cut(s) | 344, 378, 399 |
| HpySE526I | ACGT | 1 cut(s) | 86 |
| Hsp92II | CATG | 1 cut(s) | 325 |
| Ksp22I | TGATCA | 1 cut(s) | 234 |
| Kzo9I | GATC | 2 cut(s) | 29, 234 |
| LmnI | GCTCC | 1 cut(s) | 326 |
| LpnPI | CCDG | 4 cut(s) | 29, 236, 315, 365 |
| LweI | GCATC | 1 cut(s) | 152 |
| MaeII | ACGT | 1 cut(s) | 86 |
| MalI | GATC | 2 cut(s) | 31, 236 |
| MboI | GATC | 2 cut(s) | 29, 234 |
| MboII | GAAGA | 1 cut(s) | 106 |
| MfeI | CAATTG | 1 cut(s) | 315 |
| MluCI | AATT | 5 cut(s) | 129, 160, 167, 315, 393 |
| MnlI | CCTC | 3 cut(s) | 36, 197, 202 |
| MroXI | GAANNNNTTC | 1 cut(s) | 101 |
| MseI | TTAA | 1 cut(s) | 128 |
| MunI | CAATTG | 1 cut(s) | 315 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 78, 412 |
| NdeII | GATC | 2 cut(s) | 29, 234 |
| NlaIII | CATG | 1 cut(s) | 325 |
| PdmI | GAANNNNTTC | 1 cut(s) | 101 |
| PfeI | GAWTC | 1 cut(s) | 59 |
| PshAI | GACNNNNGTC | 1 cut(s) | 317 |
| PspFI | CCCAGC | 1 cut(s) | 43 |
| RsaI | GTAC | 1 cut(s) | 384 |
| RsaNI | GTAC | 1 cut(s) | 383 |
| SaqAI | TTAA | 1 cut(s) | 128 |
| Sau3AI | GATC | 2 cut(s) | 29, 234 |
| SetI | ASST | 8 cut(s) | 83, 89, 126, 199, 252, 304, 350, 384 |
| SfaNI | GCATC | 1 cut(s) | 152 |
| Sse9I | AATT | 5 cut(s) | 129, 160, 167, 315, 393 |
| TaaI | ACNGT | 1 cut(s) | 66 |
| TaiI | ACGT | 1 cut(s) | 89 |
| TaqI | TCGA | 1 cut(s) | 28 |
| TasI | AATT | 5 cut(s) | 129, 160, 167, 315, 393 |
| TfiI | GAWTC | 1 cut(s) | 59 |
| Tru1I | TTAA | 1 cut(s) | 128 |
| Tru9I | TTAA | 1 cut(s) | 128 |
| TscAI | CASTG | 2 cut(s) | 153, 407 |
| TspDTI | ATGAA | 1 cut(s) | 351 |
| TspGWI | ACGGA | 1 cut(s) | 321 |
| TspRI | CASTG | 2 cut(s) | 153, 407 |
| XapI | RAATTY | 1 cut(s) | 167 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 196, 399 |
| XmnI | GAANNNNTTC | 1 cut(s) | 101 |