No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000017291 |
| rosa_rugosa | Rorug04G0289000 Rorug06G0268400 |
| rosa_samantha | Rh1AG078100 Rh1BG008500 Rh1CG013500 Rh2AG169000 Rh2AG169100 Rh2AG169500 Rh2AG169600 Rh2BG419300 Rh2CG174800 Rh2CG175000 Rh2CG175100 Rh2DG174500 Rh2DG175000 Rh3DG074800 |
| rosa_wichuraiana | Rw2G013260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 222 |
| AflIII | ACRYGT | 2 cut(s) | 54, 151 |
| AgsI | TTSAA | 1 cut(s) | 149 |
| AluBI | AGCT | 2 cut(s) | 91, 169 |
| AluI | AGCT | 2 cut(s) | 91, 169 |
| AlwI | GGATC | 1 cut(s) | 222 |
| Ama87I | CYCGRG | 1 cut(s) | 20 |
| AoxI | GGCC | 1 cut(s) | 75 |
| AvaI | CYCGRG | 1 cut(s) | 20 |
| BbsI | GAAGAC | 1 cut(s) | 8 |
| BmeT110I | CYCGRG | 1 cut(s) | 20 |
| BmiI | GGNNCC | 2 cut(s) | 138, 192 |
| BpiI | GAAGAC | 1 cut(s) | 8 |
| BseYI | CCCAGC | 1 cut(s) | 95 |
| Bsh1285I | CGRYCG | 1 cut(s) | 38 |
| BshFI | GGCC | 1 cut(s) | 77 |
| BsiEI | CGRYCG | 1 cut(s) | 38 |
| BsiHKCI | CYCGRG | 1 cut(s) | 20 |
| BslFI | GGGAC | 1 cut(s) | 140 |
| BsmFI | GGGAC | 1 cut(s) | 140 |
| BsnI | GGCC | 1 cut(s) | 77 |
| BsoBI | CYCGRG | 1 cut(s) | 20 |
| Bsp143I | GATC | 1 cut(s) | 214 |
| BspANI | GGCC | 1 cut(s) | 77 |
| BspLI | GGNNCC | 2 cut(s) | 138, 192 |
| BspPI | GGATC | 1 cut(s) | 222 |
| BssMI | GATC | 1 cut(s) | 214 |
| Bst4CI | ACNGT | 1 cut(s) | 69 |
| BstC8I | GCNNGC | 1 cut(s) | 93 |
| BstKTI | GATC | 1 cut(s) | 217 |
| BstMBI | GATC | 1 cut(s) | 214 |
| BstMCI | CGRYCG | 1 cut(s) | 38 |
| BstNSI | RCATGY | 2 cut(s) | 58, 155 |
| BstV2I | GAAGAC | 1 cut(s) | 8 |
| BstX2I | RGATCY | 1 cut(s) | 214 |
| BstYI | RGATCY | 1 cut(s) | 214 |
| BsuRI | GGCC | 1 cut(s) | 77 |
| Cac8I | GCNNGC | 1 cut(s) | 93 |
| CviAII | CATG | 2 cut(s) | 55, 152 |
| CviJI | RGCY | 5 cut(s) | 32, 77, 91, 139, 169 |
| CviKI_1 | RGCY | 5 cut(s) | 32, 77, 91, 139, 169 |
| DpnI | GATC | 1 cut(s) | 216 |
| DpnII | GATC | 1 cut(s) | 214 |
| Eco88I | CYCGRG | 1 cut(s) | 20 |
| FaeI | CATG | 2 cut(s) | 58, 155 |
| FaiI | YATR | 2 cut(s) | 56, 153 |
| FaqI | GGGAC | 1 cut(s) | 140 |
| FatI | CATG | 2 cut(s) | 54, 151 |
| GsaI | CCCAGC | 1 cut(s) | 99 |
| HaeIII | GGCC | 1 cut(s) | 77 |
| Hin1II | CATG | 2 cut(s) | 58, 155 |
| HincII | GTYRAC | 1 cut(s) | 106 |
| HindII | GTYRAC | 1 cut(s) | 106 |
| HindIII | AAGCTT | 1 cut(s) | 167 |
| HinfI | GANTC | 1 cut(s) | 117 |
| Hpy166II | GTNNAC | 1 cut(s) | 106 |
| Hpy188I | TCNGA | 2 cut(s) | 136, 219 |
| Hpy188III | TCNNGA | 2 cut(s) | 20, 228 |
| Hpy8I | GTNNAC | 1 cut(s) | 106 |
| HpyAV | CCTTC | 1 cut(s) | 4 |
| HpyCH4III | ACNGT | 1 cut(s) | 69 |
| HpyCH4IV | ACGT | 1 cut(s) | 108 |
| HpySE526I | ACGT | 1 cut(s) | 108 |
| Hsp92II | CATG | 2 cut(s) | 58, 155 |
| Kzo9I | GATC | 1 cut(s) | 214 |
| LmnI | GCTCC | 3 cut(s) | 45, 88, 136 |
| LpnPI | CCDG | 1 cut(s) | 81 |
| MaeII | ACGT | 1 cut(s) | 108 |
| MalI | GATC | 1 cut(s) | 216 |
| MboI | GATC | 1 cut(s) | 214 |
| MboII | GAAGA | 3 cut(s) | 8, 16, 19 |
| MfeI | CAATTG | 1 cut(s) | 123 |
| MflI | RGATCY | 1 cut(s) | 214 |
| MluCI | AATT | 1 cut(s) | 123 |
| MmeI | TCCRAC | 1 cut(s) | 105 |
| MnlI | CCTC | 2 cut(s) | 88, 150 |
| MunI | CAATTG | 1 cut(s) | 123 |
| NdeII | GATC | 1 cut(s) | 214 |
| NlaIII | CATG | 2 cut(s) | 58, 155 |
| NlaIV | GGNNCC | 2 cut(s) | 138, 192 |
| NspI | RCATGY | 2 cut(s) | 58, 155 |
| PaeR7I | CTCGAG | 1 cut(s) | 20 |
| PciI | ACATGT | 2 cut(s) | 54, 151 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 40 |
| PfeI | GAWTC | 1 cut(s) | 117 |
| PscI | ACATGT | 2 cut(s) | 54, 151 |
| PspFI | CCCAGC | 1 cut(s) | 95 |
| PspN4I | GGNNCC | 2 cut(s) | 138, 192 |
| PsuI | RGATCY | 1 cut(s) | 214 |
| Sau3AI | GATC | 1 cut(s) | 214 |
| SetI | ASST | 3 cut(s) | 93, 111, 171 |
| Sfr274I | CTCGAG | 1 cut(s) | 20 |
| SlaI | CTCGAG | 1 cut(s) | 20 |
| SmlI | CTYRAG | 1 cut(s) | 20 |
| SmoI | CTYRAG | 1 cut(s) | 20 |
| Sse9I | AATT | 1 cut(s) | 123 |
| TaaI | ACNGT | 1 cut(s) | 69 |
| TaiI | ACGT | 1 cut(s) | 111 |
| TaqI | TCGA | 1 cut(s) | 21 |
| TaqII | GACCGA | 1 cut(s) | 24 |
| TasI | AATT | 1 cut(s) | 123 |
| TfiI | GAWTC | 1 cut(s) | 117 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 32 |
| XceI | RCATGY | 2 cut(s) | 58, 155 |
| XhoI | CTCGAG | 1 cut(s) | 20 |