Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0011605

Physical Location & Seq

Genomic Coordinates Forward (+)

41532391 .. 41535130

Gene Structure 2740 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0268400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGAGAACAACTTTTTCCTCAACGCCGGAATCCCGCCCTCGCTGCACTTTGAACCGGCACAGTCAATGCCCTCGTGGCGTTCTTTATCAACTGCAATGGACATTCAATCCGCCGACCGGAATTGCTCGTCGGAGCGATCGCCGGAGTGCTTCTACAATCCCAACTGGGACAACAAGTCAACCGACCCCCAGAGCGTCCACTTCGAGTCTGCCCTGAGTTCGATGGTGTCGTCTCCGGTGGCGTCCAACTCCAACATCTCCAATGAGAGCTTTGTCATCAGAGAACTGATAGGGAAGCTCGGCAGCATTGGCAACAGTTCCAACGAGATCTCGGCTACCATTCCGGCTAACAATAATTCTTACATGGGCGGTGGAAATGGGAGCACCAACACTTCATGCTACAGCACTCCTCTGAATTCTCCTCCGAAGCTCAACTTGCCGATTGTGGATCATCATTTGGCGAAAGAGAAGCTACCCAGTTTGGGAAAGTCGATGCCCTTGAACTCCAGCGTGGCCGAGTTCTCGGCTGATCCCGGATTTGCAGAGAGGGCGGCCAAGTTCTCGTGTTTCGGAAGCAGGAGTTTTAATGGCAGAACCACCCAGCTTGGAACGCACACCAACAATTCTGAAGTGGCTTATAGATCTAATCAACCAATATTAGGGAATGCGAATAAACTCCCTCGAGTTTCGAGCAGTCCTTCTCTTAAGGCGCTTGGATCTCAGACGGAGCAGAGGACTTCCCAATTGCCCAATTCTCGAGAAGAGTCCAAATCCACAGTAGCATCTGAGCAACAATCCCCAATTGGGGAGACAGGGCTGGTACCTTCTTCTTCCACTGATATGAGTTCCAGGAAAAGAAAAGCAGCTTCCAAGGGAAAAGCCAAGGACCCAGTAAAGGTGGCTGAAGCTAGTGATATTTCGGATTTGAATGCCAAGCGTTGCAAGCCAAACGAGGGCAATGTGAACAATGAAAACGGCTCTGTTAAAGCAGAGGAAGATACAAAGGGAAGTACTAGTTCCGATGAGAAACCAGGCAAGACTGGTTCGAAGCCACCGGAGCCGCTCAAGGACTATATTCATGTACGAGCAAGAAGGGGTCAAGCCACTGACAGCCATAGTCTAGCTGAAAGGGTCCGAAGAGAGAAGATCAGCGAAAGGATGAAGCTTCTACAAGATCTTGTGCCGGGTTGCAACAAGGTGACCGGAAAAGCACTCATGCTAGACGAGATTATAAATTACGTGCAGTCATTACAGCGCCAAGTTGAGTTTCTCTCCATGAAGTTGTCTTCTGTGAATACCACCAGGCTGGATTTTAACATGGATGCTCTAATGTCAAAAGAGATATTTCAACAACAAAGTAGTTCTTTGCCACACCCAATATTCCCATCAGATTCCTCGGCACAAGCCATTTATGGTCACCAGCAAAGTCCAGCACATTGCTCAGTGGACCCGTTAGATTCTGCATTATGCCAAAGCCTTGGGATGCAATTACCTCCCCTCAATGCTTTTAGTGAAGCTATGCCTCAGTATCCAGGATTTGGTGAAGATGACCTGCAAACCATTGTGCAAATGGGTTTTGGCCAAAACCCAAATAAAGAAACAGAATTTCATGGTTCAAACCAAGCATCCCACATGAAAATTGAGCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04120 ko04914 map04110 map04111 map04120 map04914

Pfam Domains

Protein Families

ANAPC4_WD40 WD40

Protein Analysis

549

Amino Acids

59.57

Weight (kDa)

6.66

Isoelectric Point (pI)

57.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	371 - 418	8.2e-07	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	376 - 421	6.8e-07	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011605)

Species	Orthologous Gene IDs
prunus_persica	Prupe.4G068400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0011991
rosa_laevigata	RLG00000001485 RLG00000003619 RLG00000031877
rosa_multiflora	Rmu_sc0004594.1_g000001 Rmu_sc0008676.1_g000020
rosa_roxburghii	Rroxscaffold_1G00064600
rosa_rugosa	Rorug03G0201200 Rorug04G0460300 Rorug05G0349100 Rorug05G0418600 Rorug06G0268400
rosa_samantha	Rh5AG092200 Rh5BG088000 Rh5CG101900 Rh5DG088600 Rh6BG151900 Rh6DG136100
rosa_wichuraiana	Rw5G008050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1232
Acc36I	ACCTGC	1 cut(s)	1560
Acc65I	GGTACC	1 cut(s)	820
AccB1I	GGYRCC	1 cut(s)	820
AccB7I	CCANNNNNTGG	1 cut(s)	1538
AccBSI	CCGCTC	1 cut(s)	1063
AciI	CCGC	5 cut(s)	35, 111, 369, 551, 1061
AclWI	GGATC	3 cut(s)	456, 524, 724
AcoI	YGGCCR	3 cut(s)	513, 552, 1579
AcsI	RAATTY	2 cut(s)	415, 1604
AcuI	CTGAAG	2 cut(s)	648, 924
AcyI	GRCGYC	1 cut(s)	242
AfaI	GTAC	3 cut(s)	822, 1012, 1083
AfeI	AGCGCT	1 cut(s)	1646
AfiI	CCNNNNNNNGG	8 cut(s)	117, 482, 659, 804, 805, 895, 953, 1538
AflII	CTTAAG	1 cut(s)	704
AgsI	TTSAA	6 cut(s)	53, 107, 502, 928, 1349, 1617
AhdI	GACNNNNNGTC	1 cut(s)	175
AhlI	ACTAGT	1 cut(s)	1013
AjnI	CCWGG	4 cut(s)	848, 1030, 1301, 1531
AjuI	GAANNNNNNNTTGG	2 cut(s)	1251, 1283
Alw21I	GWGCWC	1 cut(s)	386
Alw26I	GTCTC	2 cut(s)	237, 803
AlwI	GGATC	3 cut(s)	456, 524, 724
Ama87I	CYCGRG	2 cut(s)	681, 756
Aor51HI	AGCGCT	1 cut(s)	1646
AoxI	GGCC	3 cut(s)	513, 552, 1579
ApeKI	GCWGC	3 cut(s)	43, 303, 863
ApoI	RAATTY	2 cut(s)	415, 1604
AsiSI	GCGATCGC	1 cut(s)	140
Asp718I	GGTACC	1 cut(s)	820
AspLEI	GCGC	3 cut(s)	712, 1257, 1647
AspS9I	GGNCC	3 cut(s)	886, 1132, 1447
AsuC2I	CCSGG	2 cut(s)	534, 1185
AsuHPI	GGTGA	3 cut(s)	1210, 1409, 1553
AsuII	TTCGAA	1 cut(s)	1046
AvaI	CYCGRG	2 cut(s)	681, 756
AvaII	GGWCC	3 cut(s)	886, 1132, 1447
BalI	TGGCCA	1 cut(s)	1581
BanI	GGYRCC	1 cut(s)	820
BauI	CACGAG	2 cut(s)	73, 562
BbsI	GAAGAC	1 cut(s)	1278
Bbv12I	GWGCWC	1 cut(s)	386
BbvI	GCAGC	3 cut(s)	30, 315, 875
BccI	CCATC	2 cut(s)	217, 1393
BceAI	ACGGC	1 cut(s)	991
BciT130I	CCWGG	4 cut(s)	850, 1032, 1303, 1533
BciVI	GTATCC	1 cut(s)	1539
BcnI	CCSGG	2 cut(s)	534, 1185
BcoDI	GTCTC	2 cut(s)	237, 803
BcuI	ACTAGT	1 cut(s)	1013
BfaI	CTAG	4 cut(s)	909, 1014, 1121, 1220
BfmI	CTRYAG	1 cut(s)	400
BfoI	RGCGCY	3 cut(s)	713, 1258, 1648
BfrI	CTTAAG	1 cut(s)	704
BfuAI	ACCTGC	1 cut(s)	1560
BfuI	GTATCC	1 cut(s)	1539
BglI	GCCNNNNNGGC	1 cut(s)	76
BglII	AGATCT	3 cut(s)	327, 641, 1174
BisI	GCNGC	5 cut(s)	44, 304, 552, 864, 1061
BlsI	GCNGC	5 cut(s)	45, 305, 553, 865, 1062
BmcAI	AGTACT	1 cut(s)	1012
Bme1390I	CCNGG	6 cut(s)	534, 850, 1032, 1185, 1303, 1533
Bme18I	GGWCC	3 cut(s)	886, 1132, 1447
BmeRI	GACNNNNNGTC	1 cut(s)	175
BmeT110I	CYCGRG	2 cut(s)	681, 756
BmgT120I	GGNCC	3 cut(s)	886, 1132, 1447
BmiI	GGNNCC	5 cut(s)	822, 888, 1059, 1133, 1449
BmrFI	CCNGG	6 cut(s)	534, 850, 1032, 1185, 1303, 1533
BmrI	ACTGGG	3 cut(s)	175, 471, 884
BmsI	GCATC	5 cut(s)	483, 791, 1312, 1473, 1634
BmuI	ACTGGG	3 cut(s)	175, 471, 884
BpiI	GAAGAC	1 cut(s)	1278
BplI	GAGNNNNNCTC	2 cut(s)	1256, 1288
BpmI	CTGGAG	1 cut(s)	490
Bpu14I	TTCGAA	1 cut(s)	1046
BpuEI	CTTGAG	1 cut(s)	1049
BpuMI	CCSGG	2 cut(s)	534, 1185
BsaAI	YACGTR	1 cut(s)	1240
BsaHI	GRCGYC	1 cut(s)	242
BsaJI	CCNNGG	4 cut(s)	870, 882, 1395, 1477
BsaWI	WCCGGW	4 cut(s)	117, 235, 1054, 1202
Bsc4I	CCNNNNNNNGG	8 cut(s)	117, 482, 659, 804, 805, 895, 953, 1538
Bse118I	RCCGGY	1 cut(s)	55
Bse1I	ACTGG	4 cut(s)	170, 477, 890, 1045
Bse3DI	GCAATG	3 cut(s)	102, 964, 1435
BseBI	CCWGG	4 cut(s)	850, 1032, 1303, 1533
BseDI	CCNNGG	4 cut(s)	870, 882, 1395, 1477
BseGI	GGATG	4 cut(s)	1164, 1327, 1488, 1625
BseLI	CCNNNNNNNGG	8 cut(s)	117, 482, 659, 804, 805, 895, 953, 1538
BseMI	GCAATG	3 cut(s)	102, 964, 1435
BseMII	CTCAG	5 cut(s)	206, 734, 777, 1455, 1538
BseNI	ACTGG	4 cut(s)	170, 477, 890, 1045
BseRI	GAGGAG	2 cut(s)	399, 411
BseXI	GCAGC	3 cut(s)	30, 315, 875
BseYI	CCCAGC	1 cut(s)	600
BsgI	GTGCAG	2 cut(s)	29, 1262
Bsh1285I	CGRYCG	2 cut(s)	118, 140
BshFI	GGCC	3 cut(s)	515, 554, 1581
BshNI	GGYRCC	1 cut(s)	820
BsiEI	CGRYCG	2 cut(s)	118, 140
BsiHKAI	GWGCWC	1 cut(s)	386
BsiHKCI	CYCGRG	2 cut(s)	681, 756
BslFI	GGGAC	1 cut(s)	182
BslI	CCNNNNNNNGG	8 cut(s)	117, 482, 659, 804, 805, 895, 953, 1538
BsmAI	GTCTC	2 cut(s)	237, 803
BsmBI	CGTCTC	1 cut(s)	237
BsmFI	GGGAC	1 cut(s)	182
BsmI	GAATGC	2 cut(s)	670, 934
BsnI	GGCC	3 cut(s)	515, 554, 1581
BsoBI	CYCGRG	2 cut(s)	681, 756
Bsp119I	TTCGAA	1 cut(s)	1046
Bsp1286I	GDGCHC	1 cut(s)	386
Bsp143I	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
BspACI	CCGC	5 cut(s)	35, 111, 369, 551, 1061
BspANI	GGCC	3 cut(s)	515, 554, 1581
BspCNI	CTCAG	5 cut(s)	207, 733, 778, 1454, 1537
BspLI	GGNNCC	5 cut(s)	822, 888, 1059, 1133, 1449
BspMI	ACCTGC	1 cut(s)	1560
BspPI	GGATC	3 cut(s)	456, 524, 724
BspT104I	TTCGAA	1 cut(s)	1046
BspT107I	GGYRCC	1 cut(s)	820
BspTI	CTTAAG	1 cut(s)	704
BsrBI	CCGCTC	1 cut(s)	1063
BsrDI	GCAATG	3 cut(s)	102, 964, 1435
BsrFI	RCCGGY	1 cut(s)	55
BsrI	ACTGG	4 cut(s)	170, 477, 890, 1045
BssAI	RCCGGY	1 cut(s)	55
BssECI	CCNNGG	4 cut(s)	870, 882, 1395, 1477
BssMI	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
BssNI	GRCGYC	1 cut(s)	242
BssSI	CACGAG	2 cut(s)	73, 562
BssT1I	CCWWGG	3 cut(s)	870, 882, 1477
Bst2BI	CACGAG	2 cut(s)	73, 562
Bst2UI	CCWGG	4 cut(s)	850, 1032, 1303, 1533
Bst4CI	ACNGT	3 cut(s)	63, 317, 778
Bst6I	CTCTTC	2 cut(s)	756, 1132
BstACI	GRCGYC	1 cut(s)	242
BstAFI	CTTAAG	1 cut(s)	704
BstBAI	YACGTR	1 cut(s)	1240
BstBI	TTCGAA	1 cut(s)	1046
BstC8I	GCNNGC	1 cut(s)	944
BstDEI	CTNAG	5 cut(s)	215, 720, 786, 1441, 1524
BstEII	GGTNACC	2 cut(s)	1198, 1415
BstF5I	GGATG	4 cut(s)	1164, 1327, 1488, 1625
BstH2I	RGCGCY	3 cut(s)	713, 1258, 1648
BstHHI	GCGC	3 cut(s)	712, 1257, 1647
BstKTI	GATC	8 cut(s)	140, 330, 451, 532, 644, 719, 1149, 1177
BstMAI	GTCTC	2 cut(s)	237, 803
BstMBI	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
BstMCI	CGRYCG	2 cut(s)	118, 140
BstMWI	GCNNNNNNNGC	8 cut(s)	43, 76, 309, 436, 548, 610, 943, 1057
BstNI	CCWGG	4 cut(s)	850, 1032, 1303, 1533
BstPI	GGTNACC	2 cut(s)	1198, 1415
BstSCI	CCNGG	6 cut(s)	532, 848, 1030, 1183, 1301, 1531
BstSFI	CTRYAG	1 cut(s)	400
BstV1I	GCAGC	3 cut(s)	30, 315, 875
BstV2I	GAAGAC	1 cut(s)	1278
BstX2I	RGATCY	4 cut(s)	327, 641, 716, 1174
BstXI	CCANNNNNNTGG	2 cut(s)	1306, 1478
BstYI	RGATCY	4 cut(s)	327, 641, 716, 1174
BsuI	GTATCC	1 cut(s)	1539
BsuRI	GGCC	3 cut(s)	515, 554, 1581
BtsCI	GGATG	4 cut(s)	1164, 1327, 1488, 1625
BtsIMutI	CAGTG	3 cut(s)	834, 1104, 1449
BveI	ACCTGC	1 cut(s)	1560
Cac8I	GCNNGC	1 cut(s)	944
CfoI	GCGC	3 cut(s)	712, 1257, 1647
Cfr10I	RCCGGY	1 cut(s)	55
Cfr13I	GGNCC	3 cut(s)	886, 1132, 1447
CseI	GACGC	2 cut(s)	184, 231
Csp6I	GTAC	3 cut(s)	821, 1011, 1082
CspCI	CAANNNNNGTGG	2 cut(s)	586, 621
CviAII	CATG	8 cut(s)	364, 396, 1079, 1216, 1276, 1318, 1610, 1633
CviQI	GTAC	3 cut(s)	821, 1011, 1082
DdeI	CTNAG	5 cut(s)	215, 720, 786, 1441, 1524
DpnI	GATC	8 cut(s)	139, 329, 450, 531, 643, 718, 1148, 1176
DpnII	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
DriI	GACNNNNNGTC	1 cut(s)	175
EaeI	YGGCCR	3 cut(s)	513, 552, 1579
Eam1104I	CTCTTC	2 cut(s)	756, 1132
Eam1105I	GACNNNNNGTC	1 cut(s)	175
EarI	CTCTTC	2 cut(s)	756, 1132
EciI	GGCGGA	1 cut(s)	100
Eco130I	CCWWGG	3 cut(s)	870, 882, 1477
Eco47I	GGWCC	3 cut(s)	886, 1132, 1447
Eco47III	AGCGCT	1 cut(s)	1646
Eco57I	CTGAAG	2 cut(s)	648, 924
Eco88I	CYCGRG	2 cut(s)	681, 756
Eco91I	GGTNACC	2 cut(s)	1198, 1415
EcoO109I	RGGNCCY	1 cut(s)	886
EcoO65I	GGTNACC	2 cut(s)	1198, 1415
EcoRI	GAATTC	1 cut(s)	415
EcoRII	CCWGG	4 cut(s)	848, 1030, 1301, 1531
EcoT14I	CCWWGG	3 cut(s)	870, 882, 1477
ErhI	CCWWGG	3 cut(s)	870, 882, 1477
Esp3I	CGTCTC	1 cut(s)	237
FaeI	CATG	8 cut(s)	367, 399, 1082, 1219, 1279, 1321, 1613, 1636
FalI	AAGNNNNNCTT	4 cut(s)	419, 451, 1348, 1380
FaqI	GGGAC	1 cut(s)	182
FatI	CATG	8 cut(s)	363, 395, 1078, 1215, 1275, 1317, 1609, 1632
FauI	CCCGC	1 cut(s)	42
Fnu4HI	GCNGC	5 cut(s)	44, 304, 552, 864, 1061
FokI	GGATG	4 cut(s)	1171, 1334, 1495, 1612
Fsp4HI	GCNGC	5 cut(s)	44, 304, 552, 864, 1061
FspBI	CTAG	4 cut(s)	909, 1014, 1121, 1220
GlaI	GCGC	3 cut(s)	711, 1256, 1646
GluI	GCNGC	5 cut(s)	44, 304, 552, 864, 1061
GsaI	CCCAGC	1 cut(s)	604
GsuI	CTGGAG	1 cut(s)	490
HaeII	RGCGCY	3 cut(s)	713, 1258, 1648
HaeIII	GGCC	3 cut(s)	515, 554, 1581
HgaI	GACGC	2 cut(s)	184, 231
HhaI	GCGC	3 cut(s)	712, 1257, 1647
Hin1I	GRCGYC	1 cut(s)	242
Hin1II	CATG	8 cut(s)	367, 399, 1082, 1219, 1279, 1321, 1613, 1636
Hin6I	GCGC	3 cut(s)	710, 1255, 1645
HinP1I	GCGC	3 cut(s)	710, 1255, 1645
HincII	GTYRAC	1 cut(s)	180
HindII	GTYRAC	1 cut(s)	180
HindIII	AAGCTT	1 cut(s)	1163
HinfI	GANTC	5 cut(s)	30, 206, 764, 1391, 1457
HphI	GGTGA	3 cut(s)	1210, 1409, 1553
Hpy166II	GTNNAC	4 cut(s)	180, 199, 964, 1447
Hpy188III	TCNNGA	2 cut(s)	756, 758
Hpy8I	GTNNAC	4 cut(s)	180, 199, 964, 1447
Hpy99I	CGWCG	1 cut(s)	133
HpyAV	CCTTC	3 cut(s)	708, 834, 1086
HpyCH4III	ACNGT	3 cut(s)	63, 317, 778
HpyCH4IV	ACGT	1 cut(s)	1239
HpyF10VI	GCNNNNNNNGC	8 cut(s)	43, 76, 309, 436, 548, 610, 943, 1057
HpyF3I	CTNAG	5 cut(s)	215, 720, 786, 1441, 1524
HpySE526I	ACGT	1 cut(s)	1239
Hsp92I	GRCGYC	1 cut(s)	242
Hsp92II	CATG	8 cut(s)	367, 399, 1082, 1219, 1279, 1321, 1613, 1636
HspAI	GCGC	3 cut(s)	710, 1255, 1645
KpnI	GGTACC	1 cut(s)	824
Kzo9I	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
LmnI	GCTCC	4 cut(s)	133, 381, 727, 1057
Lsp1109I	GCAGC	3 cut(s)	30, 315, 875
LweI	GCATC	5 cut(s)	483, 791, 1312, 1473, 1634
MaeI	CTAG	4 cut(s)	909, 1014, 1121, 1220
MaeII	ACGT	1 cut(s)	1239
MaeIII	GTNAC	2 cut(s)	1198, 1415
MalI	GATC	8 cut(s)	139, 329, 450, 531, 643, 718, 1148, 1176
MbiI	CCGCTC	1 cut(s)	1063
MboI	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
MboII	GAAGA	8 cut(s)	773, 819, 822, 1007, 1149, 1156, 1278, 1556
MfeI	CAATTG	2 cut(s)	743, 801
MflI	RGATCY	4 cut(s)	327, 641, 716, 1174
MhlI	GDGCHC	1 cut(s)	386
MlsI	TGGCCA	1 cut(s)	1581
MluNI	TGGCCA	1 cut(s)	1581
MlyI	GAGTC	2 cut(s)	215, 773
MmeI	TCCRAC	4 cut(s)	111, 270, 276, 345
Mox20I	TGGCCA	1 cut(s)	1581
MscI	TGGCCA	1 cut(s)	1581
MseI	TTAA	4 cut(s)	585, 705, 984, 1314
MslI	CAYNNNNRTG	1 cut(s)	839
Msp20I	TGGCCA	1 cut(s)	1581
MspCI	CTTAAG	1 cut(s)	704
MspR9I	CCNGG	6 cut(s)	534, 850, 1032, 1185, 1303, 1533
MunI	CAATTG	2 cut(s)	743, 801
Mva1269I	GAATGC	2 cut(s)	670, 934
MvaI	CCWGG	4 cut(s)	850, 1032, 1303, 1533
MwoI	GCNNNNNNNGC	8 cut(s)	43, 76, 309, 436, 548, 610, 943, 1057
NciI	CCSGG	2 cut(s)	534, 1185
NdeII	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
NlaIII	CATG	8 cut(s)	367, 399, 1082, 1219, 1279, 1321, 1613, 1636
NlaIV	GGNNCC	5 cut(s)	822, 888, 1059, 1133, 1449
NmeAIII	GCCGAG	5 cut(s)	279, 311, 503, 541, 1376
NmuCI	GTSAC	2 cut(s)	1198, 1415
NspV	TTCGAA	1 cut(s)	1046
PaeR7I	CTCGAG	2 cut(s)	681, 756
PcsI	WCGNNNNNNNCGW	1 cut(s)	227
PctI	GAATGC	2 cut(s)	670, 934
PfeI	GAWTC	3 cut(s)	30, 1391, 1457
PflMI	CCANNNNNTGG	1 cut(s)	1538
PfoI	TCCNGGA	3 cut(s)	532, 848, 1531
PkrI	GCNGC	5 cut(s)	45, 305, 553, 865, 1062
Ple19I	CGATCG	1 cut(s)	140
PleI	GAGTC	2 cut(s)	214, 772
PpsI	GAGTC	2 cut(s)	214, 772
Ppu21I	YACGTR	1 cut(s)	1240
PpuMI	RGGWCCY	1 cut(s)	886
PsiI	TTATAA	1 cut(s)	1232
Psp5II	RGGWCCY	1 cut(s)	886
Psp6I	CCWGG	4 cut(s)	848, 1030, 1301, 1531
PspEI	GGTNACC	2 cut(s)	1198, 1415
PspFI	CCCAGC	1 cut(s)	600
PspGI	CCWGG	4 cut(s)	848, 1030, 1301, 1531
PspN4I	GGNNCC	5 cut(s)	822, 888, 1059, 1133, 1449
PspPI	GGNCC	3 cut(s)	886, 1132, 1447
PspPPI	RGGWCCY	1 cut(s)	886
PspXI	VCTCGAGB	1 cut(s)	681
PsuI	RGATCY	4 cut(s)	327, 641, 716, 1174
PvuI	CGATCG	1 cut(s)	140
RgaI	GCGATCGC	1 cut(s)	140
RsaI	GTAC	3 cut(s)	822, 1012, 1083
RsaNI	GTAC	3 cut(s)	821, 1011, 1082
RseI	CAYNNNNRTG	1 cut(s)	839
SaqAI	TTAA	4 cut(s)	585, 705, 984, 1314
SatI	GCNGC	5 cut(s)	44, 304, 552, 864, 1061
Sau3AI	GATC	8 cut(s)	137, 327, 448, 529, 641, 716, 1146, 1174
Sau96I	GGNCC	3 cut(s)	886, 1132, 1447
ScaI	AGTACT	1 cut(s)	1012
SchI	GAGTC	2 cut(s)	215, 773
ScrFI	CCNGG	6 cut(s)	534, 850, 1032, 1185, 1303, 1533
SduI	GDGCHC	1 cut(s)	386
SfaAI	GCGATCGC	1 cut(s)	140
SfaNI	GCATC	5 cut(s)	483, 791, 1312, 1473, 1634
SfcI	CTRYAG	1 cut(s)	400
Sfr274I	CTCGAG	2 cut(s)	681, 756
SfuI	TTCGAA	1 cut(s)	1046
SgfI	GCGATCGC	1 cut(s)	140
SinI	GGWCC	3 cut(s)	886, 1132, 1447
SlaI	CTCGAG	2 cut(s)	681, 756
SmiMI	CAYNNNNRTG	1 cut(s)	839
SmlI	CTYRAG	4 cut(s)	681, 704, 756, 1064
SmoI	CTYRAG	4 cut(s)	681, 704, 756, 1064
SpeI	ACTAGT	1 cut(s)	1013
SsiI	CCGC	5 cut(s)	35, 111, 369, 551, 1061
SspI	AATATT	2 cut(s)	657, 1380
SspMI	CTAG	4 cut(s)	909, 1014, 1121, 1220
StyD4I	CCNGG	6 cut(s)	532, 848, 1030, 1183, 1301, 1531
StyI	CCWWGG	3 cut(s)	870, 882, 1477
TaaI	ACNGT	3 cut(s)	63, 317, 778
TaiI	ACGT	1 cut(s)	1242
TaqI	TCGA	7 cut(s)	204, 221, 491, 682, 689, 757, 1046
TatI	WGTACW	1 cut(s)	1010
TauI	GCSGC	2 cut(s)	554, 1063
TfiI	GAWTC	3 cut(s)	30, 1391, 1457
Tru1I	TTAA	4 cut(s)	585, 705, 984, 1314
Tru9I	TTAA	4 cut(s)	585, 705, 984, 1314
TscAI	CASTG	3 cut(s)	841, 1111, 1449
TseFI	GTSAC	2 cut(s)	1198, 1415
TseI	GCWGC	3 cut(s)	43, 303, 863
Tsp45I	GTSAC	2 cut(s)	1198, 1415
TspDTI	ATGAA	7 cut(s)	384, 984, 1067, 1175, 1292, 1598, 1649
TspGWI	ACGGA	1 cut(s)	740
TspRI	CASTG	3 cut(s)	841, 1111, 1449
Van91I	CCANNNNNTGG	1 cut(s)	1538
Vha464I	CTTAAG	1 cut(s)	704
VpaK11BI	GGWCC	3 cut(s)	886, 1132, 1447
XapI	RAATTY	2 cut(s)	415, 1604
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1567
XhoI	CTCGAG	2 cut(s)	681, 756
XspI	CTAG	4 cut(s)	909, 1014, 1121, 1220
ZrmI	AGTACT	1 cut(s)	1012

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.