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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.4G068400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0011991 |
| rosa_laevigata | RLG00000001485 RLG00000003619 RLG00000031877 |
| rosa_multiflora | Rmu_sc0004594.1_g000001 Rmu_sc0008676.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00064600 |
| rosa_rugosa | Rorug03G0201200 Rorug04G0460300 Rorug05G0349100 Rorug05G0418600 Rorug06G0268400 |
| rosa_samantha | Rh5AG092200 Rh5BG088000 Rh5CG101900 Rh5DG088600 Rh6BG151900 Rh6DG136100 |
| rosa_wichuraiana | Rw5G008050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 207 |
| AciI | CCGC | 4 cut(s) | 5, 18, 108, 211 |
| AclWI | GGATC | 5 cut(s) | 118, 118, 131, 139, 286 |
| AcsI | RAATTY | 1 cut(s) | 308 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 201 |
| AflIII | ACRYGT | 1 cut(s) | 162 |
| AgsI | TTSAA | 1 cut(s) | 36 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 166 |
| AluBI | AGCT | 1 cut(s) | 153 |
| AluI | AGCT | 1 cut(s) | 153 |
| Alw21I | GWGCWC | 1 cut(s) | 185 |
| AlwI | GGATC | 5 cut(s) | 118, 118, 131, 139, 286 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 156 |
| ApeKI | GCWGC | 3 cut(s) | 153, 156, 213 |
| ApoI | RAATTY | 1 cut(s) | 308 |
| AspLEI | GCGC | 1 cut(s) | 178 |
| AxyI | CCTNAGG | 1 cut(s) | 270 |
| BamHI | GGATCC | 1 cut(s) | 123 |
| BanI | GGYRCC | 1 cut(s) | 207 |
| BbsI | GAAGAC | 1 cut(s) | 268 |
| Bbv12I | GWGCWC | 1 cut(s) | 185 |
| BbvI | GCAGC | 3 cut(s) | 140, 143, 225 |
| BisI | GCNGC | 5 cut(s) | 6, 154, 157, 211, 214 |
| BlsI | GCNGC | 5 cut(s) | 7, 155, 158, 212, 215 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 166 |
| BmiI | GGNNCC | 2 cut(s) | 125, 209 |
| BmrI | ACTGGG | 1 cut(s) | 56 |
| BmuI | ACTGGG | 1 cut(s) | 56 |
| BpiI | GAAGAC | 1 cut(s) | 268 |
| BpuEI | CTTGAG | 1 cut(s) | 32 |
| BsaJI | CCNNGG | 1 cut(s) | 249 |
| BsaWI | WCCGGW | 1 cut(s) | 126 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 22, 52 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 201 |
| Bse118I | RCCGGY | 1 cut(s) | 201 |
| Bse1I | ACTGG | 1 cut(s) | 62 |
| Bse21I | CCTNAGG | 1 cut(s) | 270 |
| BseDI | CCNNGG | 1 cut(s) | 249 |
| BseGI | GGATG | 1 cut(s) | 81 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 201 |
| BseMII | CTCAG | 1 cut(s) | 284 |
| BseNI | ACTGG | 1 cut(s) | 62 |
| BseRI | GAGGAG | 2 cut(s) | 65, 68 |
| BseXI | GCAGC | 3 cut(s) | 140, 143, 225 |
| BseYI | CCCAGC | 1 cut(s) | 149 |
| BshNI | GGYRCC | 1 cut(s) | 207 |
| BsiHKAI | GWGCWC | 1 cut(s) | 185 |
| BsiSI | CCGG | 3 cut(s) | 105, 127, 202 |
| BslFI | GGGAC | 1 cut(s) | 205 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 201 |
| BsmFI | GGGAC | 1 cut(s) | 205 |
| Bsp1286I | GDGCHC | 1 cut(s) | 185 |
| Bsp143I | GATC | 4 cut(s) | 110, 123, 144, 291 |
| BspACI | CCGC | 4 cut(s) | 5, 18, 108, 211 |
| BspCNI | CTCAG | 1 cut(s) | 283 |
| BspLI | GGNNCC | 2 cut(s) | 125, 209 |
| BspPI | GGATC | 5 cut(s) | 118, 118, 131, 139, 286 |
| BspT107I | GGYRCC | 1 cut(s) | 207 |
| BsrFI | RCCGGY | 1 cut(s) | 201 |
| BsrI | ACTGG | 1 cut(s) | 62 |
| BssAI | RCCGGY | 1 cut(s) | 201 |
| BssECI | CCNNGG | 1 cut(s) | 249 |
| BssMI | GATC | 4 cut(s) | 110, 123, 144, 291 |
| BstDEI | CTNAG | 1 cut(s) | 270 |
| BstF5I | GGATG | 1 cut(s) | 81 |
| BstHHI | GCGC | 1 cut(s) | 178 |
| BstKTI | GATC | 4 cut(s) | 113, 126, 147, 294 |
| BstMBI | GATC | 4 cut(s) | 110, 123, 144, 291 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 207 |
| BstNSI | RCATGY | 1 cut(s) | 166 |
| BstV1I | GCAGC | 3 cut(s) | 140, 143, 225 |
| BstV2I | GAAGAC | 1 cut(s) | 268 |
| BstX2I | RGATCY | 3 cut(s) | 110, 123, 144 |
| BstYI | RGATCY | 3 cut(s) | 110, 123, 144 |
| Bsu36I | CCTNAGG | 1 cut(s) | 270 |
| BtsCI | GGATG | 1 cut(s) | 81 |
| BtsI | GCAGTG | 1 cut(s) | 185 |
| BtsIMutI | CAGTG | 1 cut(s) | 185 |
| CaiI | CAGNNNCTG | 1 cut(s) | 156 |
| CfoI | GCGC | 1 cut(s) | 178 |
| Cfr10I | RCCGGY | 1 cut(s) | 201 |
| CviAII | CATG | 1 cut(s) | 163 |
| CviJI | RGCY | 4 cut(s) | 54, 153, 254, 303 |
| CviKI_1 | RGCY | 4 cut(s) | 54, 153, 254, 303 |
| DdeI | CTNAG | 1 cut(s) | 270 |
| DpnI | GATC | 4 cut(s) | 112, 125, 146, 293 |
| DpnII | GATC | 4 cut(s) | 110, 123, 144, 291 |
| DriI | GACNNNNNGTC | 1 cut(s) | 166 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 166 |
| EciI | GGCGGA | 1 cut(s) | 123 |
| Eco81I | CCTNAGG | 1 cut(s) | 270 |
| FaeI | CATG | 1 cut(s) | 166 |
| FaiI | YATR | 1 cut(s) | 164 |
| FaqI | GGGAC | 1 cut(s) | 205 |
| FatI | CATG | 1 cut(s) | 162 |
| Fnu4HI | GCNGC | 5 cut(s) | 6, 154, 157, 211, 214 |
| FokI | GGATG | 1 cut(s) | 68 |
| Fsp4HI | GCNGC | 5 cut(s) | 6, 154, 157, 211, 214 |
| GlaI | GCGC | 1 cut(s) | 177 |
| GluI | GCNGC | 5 cut(s) | 6, 154, 157, 211, 214 |
| GsaI | CCCAGC | 1 cut(s) | 153 |
| HapII | CCGG | 3 cut(s) | 105, 127, 202 |
| HhaI | GCGC | 1 cut(s) | 178 |
| Hin1II | CATG | 1 cut(s) | 166 |
| Hin6I | GCGC | 1 cut(s) | 176 |
| HinP1I | GCGC | 1 cut(s) | 176 |
| HinfI | GANTC | 4 cut(s) | 118, 139, 218, 297 |
| HpaII | CCGG | 3 cut(s) | 105, 127, 202 |
| Hpy188I | TCNGA | 5 cut(s) | 123, 144, 172, 250, 296 |
| Hpy99I | CGWCG | 2 cut(s) | 172, 230 |
| HpyAV | CCTTC | 1 cut(s) | 109 |
| HpyCH4V | TGCA | 1 cut(s) | 285 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 207 |
| HpyF3I | CTNAG | 1 cut(s) | 270 |
| Hsp92II | CATG | 1 cut(s) | 166 |
| HspAI | GCGC | 1 cut(s) | 176 |
| Kzo9I | GATC | 4 cut(s) | 110, 123, 144, 291 |
| LmnI | GCTCC | 2 cut(s) | 78, 188 |
| LpnPI | CCDG | 8 cut(s) | 75, 83, 118, 140, 163, 200, 215, 257 |
| Lsp1109I | GCAGC | 3 cut(s) | 140, 143, 225 |
| MalI | GATC | 4 cut(s) | 112, 125, 146, 293 |
| MboI | GATC | 4 cut(s) | 110, 123, 144, 291 |
| MboII | GAAGA | 1 cut(s) | 268 |
| MflI | RGATCY | 3 cut(s) | 110, 123, 144 |
| MhlI | GDGCHC | 1 cut(s) | 185 |
| MluCI | AATT | 2 cut(s) | 287, 308 |
| MlyI | GAGTC | 1 cut(s) | 227 |
| MmeI | TCCRAC | 1 cut(s) | 150 |
| MnlI | CCTC | 7 cut(s) | 77, 86, 89, 95, 233, 244, 279 |
| MseI | TTAA | 1 cut(s) | 135 |
| MspA1I | CMGCKG | 1 cut(s) | 153 |
| MspI | CCGG | 3 cut(s) | 105, 127, 202 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 207 |
| NdeII | GATC | 4 cut(s) | 110, 123, 144, 291 |
| NlaIII | CATG | 1 cut(s) | 166 |
| NlaIV | GGNNCC | 2 cut(s) | 125, 209 |
| NspI | RCATGY | 1 cut(s) | 166 |
| PciI | ACATGT | 1 cut(s) | 162 |
| PfeI | GAWTC | 3 cut(s) | 118, 139, 297 |
| PkrI | GCNGC | 5 cut(s) | 7, 155, 158, 212, 215 |
| PleI | GAGTC | 1 cut(s) | 226 |
| PpsI | GAGTC | 1 cut(s) | 226 |
| PscI | ACATGT | 1 cut(s) | 162 |
| PspFI | CCCAGC | 1 cut(s) | 149 |
| PspN4I | GGNNCC | 2 cut(s) | 125, 209 |
| PstNI | CAGNNNCTG | 1 cut(s) | 156 |
| PsuI | RGATCY | 3 cut(s) | 110, 123, 144 |
| PvuII | CAGCTG | 1 cut(s) | 153 |
| SaqAI | TTAA | 1 cut(s) | 135 |
| SatI | GCNGC | 5 cut(s) | 6, 154, 157, 211, 214 |
| Sau3AI | GATC | 4 cut(s) | 110, 123, 144, 291 |
| SchI | GAGTC | 1 cut(s) | 227 |
| SduI | GDGCHC | 1 cut(s) | 185 |
| SetI | ASST | 3 cut(s) | 101, 155, 276 |
| SmlI | CTYRAG | 1 cut(s) | 47 |
| SmoI | CTYRAG | 1 cut(s) | 47 |
| Sse9I | AATT | 2 cut(s) | 287, 308 |
| SsiI | CCGC | 4 cut(s) | 5, 18, 108, 211 |
| TaqI | TCGA | 1 cut(s) | 225 |
| TasI | AATT | 2 cut(s) | 287, 308 |
| TauI | GCSGC | 2 cut(s) | 8, 213 |
| TfiI | GAWTC | 3 cut(s) | 118, 139, 297 |
| Tru1I | TTAA | 1 cut(s) | 135 |
| Tru9I | TTAA | 1 cut(s) | 135 |
| TscAI | CASTG | 1 cut(s) | 185 |
| TseI | GCWGC | 3 cut(s) | 153, 156, 213 |
| TspRI | CASTG | 1 cut(s) | 185 |
| XapI | RAATTY | 1 cut(s) | 308 |
| XceI | RCATGY | 1 cut(s) | 166 |