F-box-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0001460.1_g000008 Rmu_sc0003441.1_g000021 |
| rosa_roxburghii | Rroxscaffold_4G00308150 Rroxscaffold_5G00370200 Rroxscaffold_6G00400510 Rroxscaffold_7G00188210 |
| rosa_rugosa | Rorug01G0131700.1 Rorug03G0291900 Rorug04G0439200 Rorug07G0306700 |
| rosa_samantha | Rh1AG309500 Rh1AG424300 Rh1BG121100 Rh2CG398400 Rh3DG152800 Rh3DG152900 Rh3DG257600 Rh4AG226900 Rh4BG233000 Rh7AG422800 |
| rosa_wichuraiana | Rw6G014060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 131 |
| Acc36I | ACCTGC | 1 cut(s) | 131 |
| AluBI | AGCT | 2 cut(s) | 58, 112 |
| AluI | AGCT | 2 cut(s) | 58, 112 |
| Alw21I | GWGCWC | 1 cut(s) | 114 |
| Alw26I | GTCTC | 1 cut(s) | 62 |
| Ama87I | CYCGRG | 1 cut(s) | 87 |
| ApeKI | GCWGC | 2 cut(s) | 20, 58 |
| AsuC2I | CCSGG | 1 cut(s) | 159 |
| AvaI | CYCGRG | 1 cut(s) | 87 |
| BanII | GRGCYC | 1 cut(s) | 114 |
| BbsI | GAAGAC | 1 cut(s) | 193 |
| Bbv12I | GWGCWC | 1 cut(s) | 114 |
| BbvI | GCAGC | 2 cut(s) | 7, 45 |
| BccI | CCATC | 1 cut(s) | 194 |
| BcnI | CCSGG | 1 cut(s) | 159 |
| BcoDI | GTCTC | 1 cut(s) | 62 |
| BfuAI | ACCTGC | 1 cut(s) | 131 |
| BisI | GCNGC | 2 cut(s) | 21, 59 |
| BlsI | GCNGC | 2 cut(s) | 22, 60 |
| Bme1390I | CCNGG | 1 cut(s) | 159 |
| BmeT110I | CYCGRG | 1 cut(s) | 87 |
| BmrFI | CCNGG | 1 cut(s) | 159 |
| BpiI | GAAGAC | 1 cut(s) | 193 |
| BpuMI | CCSGG | 1 cut(s) | 159 |
| BseGI | GGATG | 1 cut(s) | 70 |
| BseXI | GCAGC | 2 cut(s) | 7, 45 |
| BsgI | GTGCAG | 1 cut(s) | 114 |
| BsiHKAI | GWGCWC | 1 cut(s) | 114 |
| BsiHKCI | CYCGRG | 1 cut(s) | 87 |
| BsiSI | CCGG | 2 cut(s) | 62, 158 |
| BsmAI | GTCTC | 1 cut(s) | 62 |
| BsoBI | CYCGRG | 1 cut(s) | 87 |
| Bsp1286I | GDGCHC | 1 cut(s) | 114 |
| BspMI | ACCTGC | 1 cut(s) | 131 |
| Bst4CI | ACNGT | 2 cut(s) | 101, 145 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 101 |
| BstC8I | GCNNGC | 2 cut(s) | 170, 229 |
| BstF5I | GGATG | 1 cut(s) | 70 |
| BstMAI | GTCTC | 1 cut(s) | 62 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 101 |
| BstSCI | CCNGG | 1 cut(s) | 157 |
| BstV1I | GCAGC | 2 cut(s) | 7, 45 |
| BstV2I | GAAGAC | 1 cut(s) | 193 |
| BtsCI | GGATG | 1 cut(s) | 70 |
| BtsIMutI | CAGTG | 1 cut(s) | 106 |
| BveI | ACCTGC | 1 cut(s) | 131 |
| Cac8I | GCNNGC | 2 cut(s) | 170, 229 |
| CviJI | RGCY | 5 cut(s) | 20, 31, 58, 112, 157 |
| CviKI_1 | RGCY | 5 cut(s) | 20, 31, 58, 112, 157 |
| Ecl136II | GAGCTC | 1 cut(s) | 112 |
| Eco24I | GRGCYC | 1 cut(s) | 114 |
| Eco53kI | GAGCTC | 1 cut(s) | 112 |
| Eco88I | CYCGRG | 1 cut(s) | 87 |
| EcoICRI | GAGCTC | 1 cut(s) | 112 |
| EcoT38I | GRGCYC | 1 cut(s) | 114 |
| FaiI | YATR | 2 cut(s) | 177, 212 |
| Fnu4HI | GCNGC | 2 cut(s) | 21, 59 |
| FokI | GGATG | 1 cut(s) | 77 |
| FriOI | GRGCYC | 1 cut(s) | 114 |
| Fsp4HI | GCNGC | 2 cut(s) | 21, 59 |
| GluI | GCNGC | 2 cut(s) | 21, 59 |
| HapII | CCGG | 2 cut(s) | 62, 158 |
| HinfI | GANTC | 1 cut(s) | 189 |
| HpaII | CCGG | 2 cut(s) | 62, 158 |
| Hpy166II | GTNNAC | 1 cut(s) | 120 |
| Hpy188III | TCNNGA | 1 cut(s) | 87 |
| Hpy8I | GTNNAC | 1 cut(s) | 120 |
| HpyCH4III | ACNGT | 2 cut(s) | 101, 145 |
| HpyCH4V | TGCA | 4 cut(s) | 95, 104, 126, 207 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 101 |
| LmnI | GCTCC | 1 cut(s) | 117 |
| LpnPI | CCDG | 5 cut(s) | 53, 75, 128, 136, 171 |
| Lsp1109I | GCAGC | 2 cut(s) | 7, 45 |
| MaeIII | GTNAC | 1 cut(s) | 3 |
| MboII | GAAGA | 1 cut(s) | 198 |
| MhlI | GDGCHC | 1 cut(s) | 114 |
| MluCI | AATT | 1 cut(s) | 128 |
| MlyI | GAGTC | 1 cut(s) | 183 |
| MnlI | CCTC | 3 cut(s) | 19, 83, 86 |
| MseI | TTAA | 1 cut(s) | 140 |
| MslI | CAYNNNNRTG | 1 cut(s) | 180 |
| MspI | CCGG | 2 cut(s) | 62, 158 |
| MspR9I | CCNGG | 1 cut(s) | 159 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 101 |
| NciI | CCSGG | 1 cut(s) | 159 |
| NmuCI | GTSAC | 1 cut(s) | 3 |
| PaeR7I | CTCGAG | 1 cut(s) | 87 |
| PaqCI | CACCTGC | 1 cut(s) | 131 |
| PkrI | GCNGC | 2 cut(s) | 22, 60 |
| PleI | GAGTC | 1 cut(s) | 183 |
| PpsI | GAGTC | 1 cut(s) | 183 |
| Psp124BI | GAGCTC | 1 cut(s) | 114 |
| RseI | CAYNNNNRTG | 1 cut(s) | 180 |
| SacI | GAGCTC | 1 cut(s) | 114 |
| SaqAI | TTAA | 1 cut(s) | 140 |
| SatI | GCNGC | 2 cut(s) | 21, 59 |
| SchI | GAGTC | 1 cut(s) | 183 |
| ScrFI | CCNGG | 1 cut(s) | 159 |
| SduI | GDGCHC | 1 cut(s) | 114 |
| SetI | ASST | 4 cut(s) | 60, 94, 114, 125 |
| Sfr274I | CTCGAG | 1 cut(s) | 87 |
| SlaI | CTCGAG | 1 cut(s) | 87 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 180 |
| SmlI | CTYRAG | 1 cut(s) | 87 |
| SmoI | CTYRAG | 1 cut(s) | 87 |
| Sse9I | AATT | 1 cut(s) | 128 |
| SstI | GAGCTC | 1 cut(s) | 114 |
| StyD4I | CCNGG | 1 cut(s) | 157 |
| TaaI | ACNGT | 2 cut(s) | 101, 145 |
| TaqI | TCGA | 1 cut(s) | 88 |
| TasI | AATT | 1 cut(s) | 128 |
| Tru1I | TTAA | 1 cut(s) | 140 |
| Tru9I | TTAA | 1 cut(s) | 140 |
| TscAI | CASTG | 1 cut(s) | 106 |
| TseFI | GTSAC | 1 cut(s) | 3 |
| TseI | GCWGC | 2 cut(s) | 20, 58 |
| Tsp45I | GTSAC | 1 cut(s) | 3 |
| TspDTI | ATGAA | 1 cut(s) | 164 |
| TspRI | CASTG | 1 cut(s) | 106 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 127 |
| XhoI | CTCGAG | 1 cut(s) | 87 |