f-box protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0001460.1_g000008 Rmu_sc0003441.1_g000021 |
| rosa_roxburghii | Rroxscaffold_4G00308150 Rroxscaffold_5G00370200 Rroxscaffold_6G00400510 Rroxscaffold_7G00188210 |
| rosa_rugosa | Rorug01G0131700.1 Rorug03G0291900 Rorug04G0439200 Rorug07G0306700 |
| rosa_samantha | Rh1AG309500 Rh1AG424300 Rh1BG121100 Rh2CG398400 Rh3DG152800 Rh3DG152900 Rh3DG257600 Rh4AG226900 Rh4BG233000 Rh7AG422800 |
| rosa_wichuraiana | Rw6G014060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 101 |
| Acc36I | ACCTGC | 1 cut(s) | 101 |
| AciI | CCGC | 1 cut(s) | 243 |
| AcsI | RAATTY | 1 cut(s) | 196 |
| AcuI | CTGAAG | 1 cut(s) | 167 |
| AfaI | GTAC | 1 cut(s) | 233 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 14 |
| AjnI | CCWGG | 1 cut(s) | 127 |
| AluBI | AGCT | 1 cut(s) | 28 |
| AluI | AGCT | 1 cut(s) | 28 |
| Alw26I | GTCTC | 1 cut(s) | 32 |
| Ama87I | CYCGRG | 1 cut(s) | 57 |
| ApoI | RAATTY | 1 cut(s) | 196 |
| AsuHPI | GGTGA | 1 cut(s) | 35 |
| AvaI | CYCGRG | 1 cut(s) | 57 |
| BbsI | GAAGAC | 2 cut(s) | 163, 248 |
| BccI | CCATC | 1 cut(s) | 164 |
| BceAI | ACGGC | 1 cut(s) | 250 |
| BciT130I | CCWGG | 1 cut(s) | 129 |
| BciVI | GTATCC | 1 cut(s) | 15 |
| BcoDI | GTCTC | 1 cut(s) | 32 |
| BfaI | CTAG | 1 cut(s) | 203 |
| BfuAI | ACCTGC | 1 cut(s) | 101 |
| BfuI | GTATCC | 1 cut(s) | 15 |
| Bme1390I | CCNGG | 1 cut(s) | 129 |
| BmeT110I | CYCGRG | 1 cut(s) | 57 |
| BmrFI | CCNGG | 1 cut(s) | 129 |
| BpiI | GAAGAC | 2 cut(s) | 163, 248 |
| BsaWI | WCCGGW | 1 cut(s) | 31 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 71, 101 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 14 |
| BseBI | CCWGG | 1 cut(s) | 129 |
| BseGI | GGATG | 2 cut(s) | 40, 259 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 14 |
| BsgI | GTGCAG | 1 cut(s) | 84 |
| BsiHKCI | CYCGRG | 1 cut(s) | 57 |
| BsiSI | CCGG | 1 cut(s) | 32 |
| BslFI | GGGAC | 1 cut(s) | 204 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 14 |
| BsmAI | GTCTC | 1 cut(s) | 32 |
| BsmFI | GGGAC | 1 cut(s) | 204 |
| BsoBI | CYCGRG | 1 cut(s) | 57 |
| BspACI | CCGC | 1 cut(s) | 243 |
| BspMI | ACCTGC | 1 cut(s) | 101 |
| Bst2UI | CCWGG | 1 cut(s) | 129 |
| Bst4CI | ACNGT | 2 cut(s) | 71, 251 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 71 |
| BstC8I | GCNNGC | 1 cut(s) | 140 |
| BstF5I | GGATG | 2 cut(s) | 40, 259 |
| BstMAI | GTCTC | 1 cut(s) | 32 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 71 |
| BstNI | CCWGG | 1 cut(s) | 129 |
| BstSCI | CCNGG | 1 cut(s) | 127 |
| BstV2I | GAAGAC | 2 cut(s) | 163, 248 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 152 |
| BsuI | GTATCC | 1 cut(s) | 15 |
| BtsCI | GGATG | 2 cut(s) | 40, 259 |
| BtsIMutI | CAGTG | 2 cut(s) | 76, 191 |
| BveI | ACCTGC | 1 cut(s) | 101 |
| Cac8I | GCNNGC | 1 cut(s) | 140 |
| Csp6I | GTAC | 1 cut(s) | 232 |
| CviJI | RGCY | 2 cut(s) | 28, 127 |
| CviKI_1 | RGCY | 2 cut(s) | 28, 127 |
| CviQI | GTAC | 1 cut(s) | 232 |
| Eco57I | CTGAAG | 1 cut(s) | 167 |
| Eco88I | CYCGRG | 1 cut(s) | 57 |
| EcoRI | GAATTC | 1 cut(s) | 196 |
| EcoRII | CCWGG | 1 cut(s) | 127 |
| FaiI | YATR | 1 cut(s) | 147 |
| FaqI | GGGAC | 1 cut(s) | 204 |
| FokI | GGATG | 2 cut(s) | 47, 246 |
| FspBI | CTAG | 1 cut(s) | 203 |
| HapII | CCGG | 1 cut(s) | 32 |
| HinfI | GANTC | 1 cut(s) | 159 |
| HpaII | CCGG | 1 cut(s) | 32 |
| HphI | GGTGA | 1 cut(s) | 35 |
| Hpy166II | GTNNAC | 1 cut(s) | 90 |
| Hpy188III | TCNNGA | 1 cut(s) | 57 |
| Hpy8I | GTNNAC | 1 cut(s) | 90 |
| HpyAV | CCTTC | 1 cut(s) | 112 |
| HpyCH4III | ACNGT | 2 cut(s) | 71, 251 |
| HpyCH4V | TGCA | 2 cut(s) | 65, 96 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 71 |
| LmnI | GCTCC | 1 cut(s) | 147 |
| LpnPI | CCDG | 5 cut(s) | 45, 98, 106, 114, 141 |
| MaeI | CTAG | 1 cut(s) | 203 |
| MboII | GAAGA | 2 cut(s) | 168, 248 |
| MluCI | AATT | 3 cut(s) | 12, 98, 196 |
| MlyI | GAGTC | 1 cut(s) | 153 |
| MmeI | TCCRAC | 1 cut(s) | 57 |
| MnlI | CCTC | 4 cut(s) | 14, 53, 56, 184 |
| MseI | TTAA | 1 cut(s) | 110 |
| MslI | CAYNNNNRTG | 1 cut(s) | 150 |
| MspI | CCGG | 1 cut(s) | 32 |
| MspR9I | CCNGG | 1 cut(s) | 129 |
| MvaI | CCWGG | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 71 |
| PaeR7I | CTCGAG | 1 cut(s) | 57 |
| PaqCI | CACCTGC | 1 cut(s) | 101 |
| PleI | GAGTC | 1 cut(s) | 153 |
| PpsI | GAGTC | 1 cut(s) | 153 |
| Psp6I | CCWGG | 1 cut(s) | 127 |
| PspGI | CCWGG | 1 cut(s) | 127 |
| RsaI | GTAC | 1 cut(s) | 233 |
| RsaNI | GTAC | 1 cut(s) | 232 |
| RseI | CAYNNNNRTG | 1 cut(s) | 150 |
| SaqAI | TTAA | 1 cut(s) | 110 |
| SchI | GAGTC | 1 cut(s) | 153 |
| ScrFI | CCNGG | 1 cut(s) | 129 |
| SetI | ASST | 5 cut(s) | 25, 30, 64, 95, 133 |
| Sfr274I | CTCGAG | 1 cut(s) | 57 |
| SlaI | CTCGAG | 1 cut(s) | 57 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 150 |
| SmlI | CTYRAG | 1 cut(s) | 57 |
| SmoI | CTYRAG | 1 cut(s) | 57 |
| Sse9I | AATT | 3 cut(s) | 12, 98, 196 |
| SsiI | CCGC | 1 cut(s) | 243 |
| SspMI | CTAG | 1 cut(s) | 203 |
| StyD4I | CCNGG | 1 cut(s) | 127 |
| TaaI | ACNGT | 2 cut(s) | 71, 251 |
| TaqI | TCGA | 1 cut(s) | 58 |
| TasI | AATT | 3 cut(s) | 12, 98, 196 |
| Tru1I | TTAA | 1 cut(s) | 110 |
| Tru9I | TTAA | 1 cut(s) | 110 |
| TscAI | CASTG | 2 cut(s) | 76, 191 |
| TspDTI | ATGAA | 1 cut(s) | 248 |
| TspGWI | ACGGA | 1 cut(s) | 252 |
| TspRI | CASTG | 2 cut(s) | 76, 191 |
| XapI | RAATTY | 1 cut(s) | 196 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 97 |
| XhoI | CTCGAG | 1 cut(s) | 57 |
| XspI | CTAG | 1 cut(s) | 203 |