Rh1BG432600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Reverse (-)
54790237 .. 54790416
180 bp
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UTR
Exon/CDS
Intron
Rh1BG432600.1

Sequence Viewer

Length: 180 bp
ATGGAGAGTGGTTCTGATGAGGAGCTTACCAAGTACGAAAGGAGGTTGAAGAAGCTGGGGATCTCTTCACTTGGGTTTGGGGCGTGTGGCGGAGGACCGACAGAATCGAGTTTTGAAGACACAGAAGATATCTCTCGAAAGGAGGTTGAAGAAGCTGGGGATCTCTTCACTTGGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

59

Amino Acids

6.48

Weight (kDa)

4.36

Isoelectric Point (pI)

58.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 90
AclWI GGATC 2 cut(s) 68, 168
AfaI GTAC 1 cut(s) 35
AgsI TTSAA 3 cut(s) 49, 116, 149
AluBI AGCT 3 cut(s) 25, 55, 155
AluI AGCT 3 cut(s) 25, 55, 155
AlwI GGATC 2 cut(s) 68, 168
AspS9I GGNCC 1 cut(s) 95
AvaII GGWCC 1 cut(s) 95
BbsI GAAGAC 1 cut(s) 123
Bme18I GGWCC 1 cut(s) 95
BmgT120I GGNCC 1 cut(s) 95
BpiI GAAGAC 1 cut(s) 123
BseRI GAGGAG 1 cut(s) 35
BseYI CCCAGC 2 cut(s) 55, 155
Bsp143I GATC 2 cut(s) 60, 160
BspACI CCGC 1 cut(s) 90
BspPI GGATC 2 cut(s) 68, 168
BssMI GATC 2 cut(s) 60, 160
Bst6I CTCTTC 2 cut(s) 70, 170
BstKTI GATC 2 cut(s) 63, 163
BstMBI GATC 2 cut(s) 60, 160
BstV2I GAAGAC 1 cut(s) 123
BstX2I RGATCY 2 cut(s) 60, 160
BstYI RGATCY 2 cut(s) 60, 160
Cfr13I GGNCC 1 cut(s) 95
Csp6I GTAC 1 cut(s) 34
CviJI RGCY 3 cut(s) 25, 55, 155
CviKI_1 RGCY 3 cut(s) 25, 55, 155
CviQI GTAC 1 cut(s) 34
DpnI GATC 2 cut(s) 62, 162
DpnII GATC 2 cut(s) 60, 160
Eam1104I CTCTTC 2 cut(s) 70, 170
EarI CTCTTC 2 cut(s) 70, 170
EciI GGCGGA 1 cut(s) 105
Eco32I GATATC 1 cut(s) 130
Eco47I GGWCC 1 cut(s) 95
EcoRV GATATC 1 cut(s) 130
GsaI CCCAGC 2 cut(s) 59, 159
HinfI GANTC 1 cut(s) 104
Hpy188I TCNGA 1 cut(s) 16
Hpy188III TCNNGA 1 cut(s) 135
Kzo9I GATC 2 cut(s) 60, 160
LmnI GCTCC 1 cut(s) 22
LpnPI CCDG 2 cut(s) 41, 141
MalI GATC 2 cut(s) 62, 162
MboI GATC 2 cut(s) 60, 160
MboII GAAGA 6 cut(s) 57, 61, 128, 137, 157, 161
MflI RGATCY 2 cut(s) 60, 160
MnlI CCTC 4 cut(s) 13, 36, 86, 136
NdeII GATC 2 cut(s) 60, 160
PfeI GAWTC 1 cut(s) 104
PspFI CCCAGC 2 cut(s) 55, 155
PspPI GGNCC 1 cut(s) 95
PsuI RGATCY 2 cut(s) 60, 160
RsaI GTAC 1 cut(s) 35
RsaNI GTAC 1 cut(s) 34
Sau3AI GATC 2 cut(s) 60, 160
Sau96I GGNCC 1 cut(s) 95
SetI ASST 5 cut(s) 27, 47, 57, 147, 157
SgeI CNNG 7 cut(s) 43, 68, 83, 96, 120, 147, 168
SinI GGWCC 1 cut(s) 95
SsiI CCGC 1 cut(s) 90
TaqI TCGA 2 cut(s) 107, 136
TaqII GACCGA 1 cut(s) 112
TfiI GAWTC 1 cut(s) 104
VpaK11BI GGWCC 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.