Rh7DG419100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
59109334 .. 59111530
2197 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG419100.1

Sequence Viewer

Length: 264 bp
ATGCAATGGGGTCAGACCCCTTCTTTTCTCTTGGTCTGGATTAAGGATTCATTGTCCTTAACTGCAAAGACTAAGTTAGTTAAAACCATTAAACAAACTTATGCCTTGGAGCTGCAATCCATGAGCCGTCTCTACATGGCTACAAAAAGGTTTTCGGAGCAGATTGATGCTCTGGAAAGATCTGCAGAGGCAATATCTGTTGGTGGAATCAACCACACTTTCCTATTGACATATGATAATGCTTATATTTCAAAATACCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

87

Amino Acids

10.01

Weight (kDa)

9.52

Isoelectric Point (pI)

50.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 252
AluBI AGCT 1 cut(s) 112
AluI AGCT 1 cut(s) 112
Alw26I GTCTC 1 cut(s) 134
ApeKI GCWGC 1 cut(s) 112
BbvI GCAGC 1 cut(s) 99
BceAI ACGGC 1 cut(s) 111
BcoDI GTCTC 1 cut(s) 134
BfmI CTRYAG 1 cut(s) 183
BglII AGATCT 1 cut(s) 179
BisI GCNGC 1 cut(s) 113
BlsI GCNGC 1 cut(s) 114
BmsI GCATC 1 cut(s) 157
BsaJI CCNNGG 1 cut(s) 105
Bse3DI GCAATG 1 cut(s) 11
BseDI CCNNGG 1 cut(s) 105
BseMI GCAATG 1 cut(s) 11
BseXI GCAGC 1 cut(s) 99
BsmAI GTCTC 1 cut(s) 134
BsmBI CGTCTC 1 cut(s) 134
Bsp143I GATC 1 cut(s) 179
BspMAI CTGCAG 1 cut(s) 187
BsrDI GCAATG 1 cut(s) 11
BssECI CCNNGG 1 cut(s) 105
BssMI GATC 1 cut(s) 179
BssT1I CCWWGG 1 cut(s) 105
Bst4CI ACNGT 1 cut(s) 260
BstDEI CTNAG 1 cut(s) 72
BstKTI GATC 1 cut(s) 182
BstMAI GTCTC 1 cut(s) 134
BstMBI GATC 1 cut(s) 179
BstSFI CTRYAG 1 cut(s) 183
BstV1I GCAGC 1 cut(s) 99
BstX2I RGATCY 1 cut(s) 179
BstYI RGATCY 1 cut(s) 179
CviAII CATG 2 cut(s) 121, 136
CviJI RGCY 3 cut(s) 112, 126, 140
CviKI_1 RGCY 3 cut(s) 112, 126, 140
DdeI CTNAG 1 cut(s) 72
DpnI GATC 1 cut(s) 181
DpnII GATC 1 cut(s) 179
Eco130I CCWWGG 1 cut(s) 105
EcoT14I CCWWGG 1 cut(s) 105
ErhI CCWWGG 1 cut(s) 105
Esp3I CGTCTC 1 cut(s) 134
FaeI CATG 2 cut(s) 124, 139
FaiI YATR 6 cut(s) 102, 122, 137, 232, 234, 246
FatI CATG 2 cut(s) 120, 135
FauNDI CATATG 1 cut(s) 232
Fnu4HI GCNGC 1 cut(s) 113
Fsp4HI GCNGC 1 cut(s) 113
GluI GCNGC 1 cut(s) 113
Hin1II CATG 2 cut(s) 124, 139
HinfI GANTC 2 cut(s) 47, 207
Hpy188I TCNGA 2 cut(s) 15, 157
Hpy188III TCNNGA 2 cut(s) 37, 173
HpyAV CCTTC 1 cut(s) 30
HpyCH4III ACNGT 1 cut(s) 260
HpyCH4V TGCA 4 cut(s) 4, 65, 115, 185
HpyF3I CTNAG 1 cut(s) 72
Hsp92II CATG 2 cut(s) 124, 139
Kzo9I GATC 1 cut(s) 179
LmnI GCTCC 2 cut(s) 109, 157
LpnPI CCDG 2 cut(s) 22, 158
Lsp1109I GCAGC 1 cut(s) 99
LweI GCATC 1 cut(s) 157
MalI GATC 1 cut(s) 181
MboI GATC 1 cut(s) 179
MflI RGATCY 1 cut(s) 179
MnlI CCTC 1 cut(s) 181
MseI TTAA 4 cut(s) 42, 59, 81, 90
NdeI CATATG 1 cut(s) 232
NdeII GATC 1 cut(s) 179
NlaIII CATG 2 cut(s) 124, 139
PfeI GAWTC 2 cut(s) 47, 207
PkrI GCNGC 1 cut(s) 114
PstI CTGCAG 1 cut(s) 187
PsuI RGATCY 1 cut(s) 179
SaqAI TTAA 4 cut(s) 42, 59, 81, 90
SatI GCNGC 1 cut(s) 113
Sau3AI GATC 1 cut(s) 179
SetI ASST 2 cut(s) 114, 152
SfaNI GCATC 1 cut(s) 157
SfcI CTRYAG 1 cut(s) 183
SgeI CNNG 6 cut(s) 43, 49, 118, 133, 148, 185
StyI CCWWGG 1 cut(s) 105
TaaI ACNGT 1 cut(s) 260
TfiI GAWTC 2 cut(s) 47, 207
Tru1I TTAA 4 cut(s) 42, 59, 81, 90
Tru9I TTAA 4 cut(s) 42, 59, 81, 90
TseI GCWGC 1 cut(s) 112
TspDTI ATGAA 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.