Rh1CG353700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
62939112 .. 62939342
231 bp
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UTR
Exon/CDS
Intron
Rh1CG353700.1

Sequence Viewer

Length: 231 bp
ATGGCGATGATATCGGGGTCAAATTCCAATTCAGGGCTAGGGTTTGGGGTGGAGTCCAATTCTCAGGGCTCCGGCTCTGAATTCGATGACTTTCTAGGTCCACAAGGGCTTCGGGTTGTTGCGTTGGAGTCCGATTTGGATTTGGATAACGATGAATTCGAAAGCGGAGGTAGAAGAGGGGTGGAGGTTACTAGGAGACAGATTCGCTGTGGGGAGGTTCACCGGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

76

Amino Acids

8.19

Weight (kDa)

4.64

Isoelectric Point (pI)

53.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 165
AcsI RAATTY 3 cut(s) 22, 80, 155
AfiI CCNNNNNNNGG 1 cut(s) 33
Alw26I GTCTC 1 cut(s) 190
ApoI RAATTY 3 cut(s) 22, 80, 155
AspS9I GGNCC 1 cut(s) 98
AsuHPI GGTGA 1 cut(s) 212
AsuII TTCGAA 1 cut(s) 159
AvaII GGWCC 1 cut(s) 98
BanII GRGCYC 1 cut(s) 71
BcoDI GTCTC 1 cut(s) 190
BfaI CTAG 3 cut(s) 38, 95, 192
Bme18I GGWCC 1 cut(s) 98
BmgT120I GGNCC 1 cut(s) 98
BmiI GGNNCC 1 cut(s) 70
Bpu14I TTCGAA 1 cut(s) 159
BsaWI WCCGGW 1 cut(s) 222
Bsc4I CCNNNNNNNGG 1 cut(s) 33
BseLI CCNNNNNNNGG 1 cut(s) 33
BseMII CTCAG 1 cut(s) 77
BsiSI CCGG 2 cut(s) 72, 223
BslI CCNNNNNNNGG 1 cut(s) 33
BsmAI GTCTC 1 cut(s) 190
Bsp119I TTCGAA 1 cut(s) 159
Bsp1286I GDGCHC 1 cut(s) 71
BspACI CCGC 1 cut(s) 165
BspCNI CTCAG 1 cut(s) 76
BspLI GGNNCC 1 cut(s) 70
BspT104I TTCGAA 1 cut(s) 159
Bst6I CTCTTC 1 cut(s) 169
BstBI TTCGAA 1 cut(s) 159
BstDEI CTNAG 1 cut(s) 63
BstMAI GTCTC 1 cut(s) 190
BtgZI GCGATG 1 cut(s) 20
Cfr13I GGNCC 1 cut(s) 98
CviJI RGCY 4 cut(s) 37, 69, 75, 109
CviKI_1 RGCY 4 cut(s) 37, 69, 75, 109
DdeI CTNAG 1 cut(s) 63
Eam1104I CTCTTC 1 cut(s) 169
EarI CTCTTC 1 cut(s) 169
Eco24I GRGCYC 1 cut(s) 71
Eco32I GATATC 1 cut(s) 12
Eco47I GGWCC 1 cut(s) 98
EcoRI GAATTC 2 cut(s) 80, 155
EcoRV GATATC 1 cut(s) 12
EcoT38I GRGCYC 1 cut(s) 71
FriOI GRGCYC 1 cut(s) 71
FspBI CTAG 3 cut(s) 38, 95, 192
HapII CCGG 2 cut(s) 72, 223
HinfI GANTC 3 cut(s) 53, 128, 202
HpaII CCGG 2 cut(s) 72, 223
HphI GGTGA 1 cut(s) 212
Hpy166II GTNNAC 2 cut(s) 101, 220
Hpy188I TCNGA 2 cut(s) 79, 133
Hpy8I GTNNAC 2 cut(s) 101, 220
HpyF3I CTNAG 1 cut(s) 63
LmnI GCTCC 1 cut(s) 74
LpnPI CCDG 3 cut(s) 18, 50, 85
MaeI CTAG 3 cut(s) 38, 95, 192
MaeIII GTNAC 1 cut(s) 187
MboII GAAGA 1 cut(s) 186
MhlI GDGCHC 1 cut(s) 71
MluCI AATT 5 cut(s) 22, 28, 58, 80, 155
MlyI GAGTC 2 cut(s) 62, 137
MmeI TCCRAC 1 cut(s) 105
MnlI CCTC 5 cut(s) 161, 170, 178, 208, 219
MspI CCGG 2 cut(s) 72, 223
NlaIV GGNNCC 1 cut(s) 70
NspV TTCGAA 1 cut(s) 159
PcsI WCGNNNNNNNCGW 1 cut(s) 156
PfeI GAWTC 1 cut(s) 202
PleI GAGTC 2 cut(s) 61, 136
PpsI GAGTC 2 cut(s) 61, 136
PspN4I GGNNCC 1 cut(s) 70
PspPI GGNCC 1 cut(s) 98
Sau96I GGNCC 1 cut(s) 98
SchI GAGTC 2 cut(s) 62, 137
SduI GDGCHC 1 cut(s) 71
SetI ASST 5 cut(s) 100, 172, 189, 219, 230
SfuI TTCGAA 1 cut(s) 159
SgeI CNNG 9 cut(s) 27, 45, 50, 77, 84, 107, 116, 125, 204
SinI GGWCC 1 cut(s) 98
Sse9I AATT 5 cut(s) 22, 28, 58, 80, 155
SsiI CCGC 1 cut(s) 165
SspMI CTAG 3 cut(s) 38, 95, 192
TaqI TCGA 2 cut(s) 84, 159
TasI AATT 5 cut(s) 22, 28, 58, 80, 155
TfiI GAWTC 1 cut(s) 202
TspDTI ATGAA 1 cut(s) 168
VpaK11BI GGWCC 1 cut(s) 98
XapI RAATTY 3 cut(s) 22, 80, 155
XspI CTAG 3 cut(s) 38, 95, 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.