Rh7AG202600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
18462524 .. 18462696
173 bp
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UTR
Exon/CDS
Intron
Rh7AG202600.1

Sequence Viewer

Length: 173 bp
ATGATATCGGGGTCAAATTCCAATTCGGGGCTAGGGTTCGGCTCTGAATTCAGTGACTTTCTGGCTCCACAAGAGCTTCGGGTTATTGGGTTGGAGTCCGATTTGGATTCAGATAACAATGAATTCAAAAGTGGAGGTAGAAGAGTGGCGGAGGTTACCAGGAGGATGAGGAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

57

Amino Acids

6.24

Weight (kDa)

4.85

Isoelectric Point (pI)

48.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 149
AcsI RAATTY 3 cut(s) 16, 47, 122
AfiI CCNNNNNNNGG 1 cut(s) 27
AgsI TTSAA 1 cut(s) 127
AjnI CCWGG 1 cut(s) 158
AluBI AGCT 1 cut(s) 76
AluI AGCT 1 cut(s) 76
ApoI RAATTY 3 cut(s) 16, 47, 122
BciT130I CCWGG 1 cut(s) 160
BfaI CTAG 1 cut(s) 32
Bme1390I CCNGG 1 cut(s) 160
BmiI GGNNCC 1 cut(s) 66
BmrFI CCNGG 1 cut(s) 160
Bsc4I CCNNNNNNNGG 1 cut(s) 27
BseBI CCWGG 1 cut(s) 160
BseGI GGATG 1 cut(s) 171
BseLI CCNNNNNNNGG 1 cut(s) 27
BslI CCNNNNNNNGG 1 cut(s) 27
BspACI CCGC 1 cut(s) 149
BspLI GGNNCC 1 cut(s) 66
Bst2UI CCWGG 1 cut(s) 160
Bst6I CTCTTC 1 cut(s) 136
BstEII GGTNACC 1 cut(s) 154
BstF5I GGATG 1 cut(s) 171
BstNI CCWGG 1 cut(s) 160
BstPI GGTNACC 1 cut(s) 154
BstSCI CCNGG 1 cut(s) 158
BtsCI GGATG 1 cut(s) 171
BtsIMutI CAGTG 1 cut(s) 58
CviJI RGCY 4 cut(s) 31, 42, 65, 76
CviKI_1 RGCY 4 cut(s) 31, 42, 65, 76
Eam1104I CTCTTC 1 cut(s) 136
EarI CTCTTC 1 cut(s) 136
EciI GGCGGA 1 cut(s) 164
Eco32I GATATC 1 cut(s) 6
Eco91I GGTNACC 1 cut(s) 154
EcoO65I GGTNACC 1 cut(s) 154
EcoRI GAATTC 2 cut(s) 47, 122
EcoRII CCWGG 1 cut(s) 158
EcoRV GATATC 1 cut(s) 6
FspBI CTAG 1 cut(s) 32
HinfI GANTC 2 cut(s) 95, 107
Hpy188I TCNGA 3 cut(s) 46, 100, 112
LmnI GCTCC 1 cut(s) 70
LpnPI CCDG 2 cut(s) 47, 145
MaeI CTAG 1 cut(s) 32
MaeIII GTNAC 2 cut(s) 53, 154
MboII GAAGA 1 cut(s) 153
MluCI AATT 4 cut(s) 16, 22, 47, 122
MlyI GAGTC 1 cut(s) 104
MmeI TCCRAC 1 cut(s) 72
MnlI CCTC 4 cut(s) 128, 145, 156, 162
MspR9I CCNGG 1 cut(s) 160
MvaI CCWGG 1 cut(s) 160
NlaIV GGNNCC 1 cut(s) 66
NmuCI GTSAC 1 cut(s) 53
PfeI GAWTC 1 cut(s) 107
PleI GAGTC 1 cut(s) 103
PpsI GAGTC 1 cut(s) 103
Psp6I CCWGG 1 cut(s) 158
PspEI GGTNACC 1 cut(s) 154
PspGI CCWGG 1 cut(s) 158
PspN4I GGNNCC 1 cut(s) 66
SchI GAGTC 1 cut(s) 104
ScrFI CCNGG 1 cut(s) 160
SetI ASST 3 cut(s) 78, 139, 156
SgeI CNNG 6 cut(s) 21, 39, 44, 74, 83, 92
Sse9I AATT 4 cut(s) 16, 22, 47, 122
SsiI CCGC 1 cut(s) 149
SspMI CTAG 1 cut(s) 32
StyD4I CCNGG 1 cut(s) 158
TasI AATT 4 cut(s) 16, 22, 47, 122
TfiI GAWTC 1 cut(s) 107
TscAI CASTG 1 cut(s) 58
TseFI GTSAC 1 cut(s) 53
Tsp45I GTSAC 1 cut(s) 53
TspDTI ATGAA 1 cut(s) 135
TspRI CASTG 1 cut(s) 58
XapI RAATTY 3 cut(s) 16, 47, 122
XspI CTAG 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.