DEAD-box ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0299761 |
| rosa_roxburghii | Rroxscaffold_1G00029190 |
| rosa_samantha | Rh1CG186800 Rh2AG392000 Rh2BG097000 Rh2CG099100 Rh2CG378800 Rh2DG096500 Rh4CG209500 Rh5AG382700 Rh6DG310100 Rh7AG468000 Rh7CG085900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 104 |
| AgsI | TTSAA | 2 cut(s) | 109, 293 |
| AluBI | AGCT | 2 cut(s) | 186, 274 |
| AluI | AGCT | 2 cut(s) | 186, 274 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 233 |
| ApeKI | GCWGC | 1 cut(s) | 183 |
| ApoI | RAATTY | 1 cut(s) | 104 |
| AseI | ATTAAT | 1 cut(s) | 125 |
| AsuHPI | GGTGA | 1 cut(s) | 176 |
| BbvI | GCAGC | 1 cut(s) | 195 |
| BccI | CCATC | 1 cut(s) | 339 |
| BfaI | CTAG | 1 cut(s) | 66 |
| BisI | GCNGC | 1 cut(s) | 184 |
| BlsI | GCNGC | 1 cut(s) | 185 |
| BmrI | ACTGGG | 1 cut(s) | 276 |
| BmuI | ACTGGG | 1 cut(s) | 276 |
| Bse1I | ACTGG | 1 cut(s) | 282 |
| BseGI | GGATG | 1 cut(s) | 8 |
| BseMII | CTCAG | 2 cut(s) | 90, 240 |
| BseNI | ACTGG | 1 cut(s) | 282 |
| BseRI | GAGGAG | 2 cut(s) | 5, 332 |
| BseXI | GCAGC | 1 cut(s) | 195 |
| BsgI | GTGCAG | 1 cut(s) | 202 |
| BsmI | GAATGC | 2 cut(s) | 220, 249 |
| Bsp143I | GATC | 1 cut(s) | 307 |
| BspCNI | CTCAG | 2 cut(s) | 91, 239 |
| BsrI | ACTGG | 1 cut(s) | 282 |
| BssMI | GATC | 1 cut(s) | 307 |
| BstC8I | GCNNGC | 1 cut(s) | 272 |
| BstDEI | CTNAG | 2 cut(s) | 99, 226 |
| BstF5I | GGATG | 1 cut(s) | 8 |
| BstKTI | GATC | 1 cut(s) | 310 |
| BstMBI | GATC | 1 cut(s) | 307 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 189 |
| BstNSI | RCATGY | 1 cut(s) | 212 |
| BstV1I | GCAGC | 1 cut(s) | 195 |
| BtsCI | GGATG | 1 cut(s) | 8 |
| Cac8I | GCNNGC | 1 cut(s) | 272 |
| CaiI | CAGNNNCTG | 1 cut(s) | 233 |
| CviAII | CATG | 1 cut(s) | 209 |
| CviJI | RGCY | 3 cut(s) | 73, 186, 274 |
| CviKI_1 | RGCY | 3 cut(s) | 73, 186, 274 |
| DdeI | CTNAG | 2 cut(s) | 99, 226 |
| DpnI | GATC | 1 cut(s) | 309 |
| DpnII | GATC | 1 cut(s) | 307 |
| EcoRI | GAATTC | 1 cut(s) | 104 |
| FaeI | CATG | 1 cut(s) | 212 |
| FaiI | YATR | 8 cut(s) | 157, 159, 177, 202, 204, 210, 250, 264 |
| FatI | CATG | 1 cut(s) | 208 |
| Fnu4HI | GCNGC | 1 cut(s) | 184 |
| Fsp4HI | GCNGC | 1 cut(s) | 184 |
| FspBI | CTAG | 1 cut(s) | 66 |
| GluI | GCNGC | 1 cut(s) | 184 |
| Hin1II | CATG | 1 cut(s) | 212 |
| HinfI | GANTC | 1 cut(s) | 113 |
| HphI | GGTGA | 1 cut(s) | 176 |
| Hpy188I | TCNGA | 3 cut(s) | 100, 142, 235 |
| Hpy188III | TCNNGA | 2 cut(s) | 66, 150 |
| HpyAV | CCTTC | 1 cut(s) | 32 |
| HpyCH4V | TGCA | 3 cut(s) | 183, 220, 270 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 189 |
| HpyF3I | CTNAG | 2 cut(s) | 99, 226 |
| Hsp92II | CATG | 1 cut(s) | 212 |
| Kzo9I | GATC | 1 cut(s) | 307 |
| LpnPI | CCDG | 3 cut(s) | 135, 178, 295 |
| Lsp1109I | GCAGC | 1 cut(s) | 195 |
| MaeI | CTAG | 1 cut(s) | 66 |
| MaeIII | GTNAC | 4 cut(s) | 4, 133, 301, 323 |
| MalI | GATC | 1 cut(s) | 309 |
| MboI | GATC | 1 cut(s) | 307 |
| MboII | GAAGA | 1 cut(s) | 17 |
| MluCI | AATT | 4 cut(s) | 104, 122, 126, 293 |
| MnlI | CCTC | 7 cut(s) | 23, 26, 84, 94, 148, 235, 310 |
| MseI | TTAA | 1 cut(s) | 125 |
| Mva1269I | GAATGC | 2 cut(s) | 220, 249 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 189 |
| NdeII | GATC | 1 cut(s) | 307 |
| NlaIII | CATG | 1 cut(s) | 212 |
| NspI | RCATGY | 1 cut(s) | 212 |
| PctI | GAATGC | 2 cut(s) | 220, 249 |
| PfeI | GAWTC | 1 cut(s) | 113 |
| PkrI | GCNGC | 1 cut(s) | 185 |
| PshBI | ATTAAT | 1 cut(s) | 125 |
| PstNI | CAGNNNCTG | 1 cut(s) | 233 |
| SaqAI | TTAA | 1 cut(s) | 125 |
| SatI | GCNGC | 1 cut(s) | 184 |
| Sau3AI | GATC | 1 cut(s) | 307 |
| SetI | ASST | 7 cut(s) | 24, 140, 182, 188, 269, 276, 340 |
| Sse9I | AATT | 4 cut(s) | 104, 122, 126, 293 |
| SspMI | CTAG | 1 cut(s) | 66 |
| TaqI | TCGA | 1 cut(s) | 310 |
| TasI | AATT | 4 cut(s) | 104, 122, 126, 293 |
| TfiI | GAWTC | 1 cut(s) | 113 |
| Tru1I | TTAA | 1 cut(s) | 125 |
| Tru9I | TTAA | 1 cut(s) | 125 |
| TseI | GCWGC | 1 cut(s) | 183 |
| TspDTI | ATGAA | 2 cut(s) | 53, 59 |
| TspGWI | ACGGA | 1 cut(s) | 20 |
| VspI | ATTAAT | 1 cut(s) | 125 |
| XapI | RAATTY | 1 cut(s) | 104 |
| XbaI | TCTAGA | 1 cut(s) | 65 |
| XceI | RCATGY | 1 cut(s) | 212 |
| XspI | CTAG | 1 cut(s) | 66 |