DEAD-box ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0299761 |
| rosa_roxburghii | Rroxscaffold_1G00029190 |
| rosa_samantha | Rh1CG186800 Rh2AG392000 Rh2BG097000 Rh2CG099100 Rh2CG378800 Rh2DG096500 Rh4CG209500 Rh5AG382700 Rh6DG310100 Rh7AG468000 Rh7CG085900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 201 |
| AciI | CCGC | 1 cut(s) | 33 |
| AcsI | RAATTY | 1 cut(s) | 72 |
| AfaI | GTAC | 2 cut(s) | 57, 220 |
| AgsI | TTSAA | 4 cut(s) | 25, 50, 152, 172 |
| AluBI | AGCT | 1 cut(s) | 266 |
| AluI | AGCT | 1 cut(s) | 266 |
| ApeKI | GCWGC | 1 cut(s) | 263 |
| ApoI | RAATTY | 1 cut(s) | 72 |
| AsuHPI | GGTGA | 3 cut(s) | 152, 183, 256 |
| BbvI | GCAGC | 1 cut(s) | 275 |
| BccI | CCATC | 1 cut(s) | 171 |
| BisI | GCNGC | 2 cut(s) | 34, 264 |
| BlsI | GCNGC | 2 cut(s) | 35, 265 |
| Bpu10I | CCTNAGC | 1 cut(s) | 105 |
| BseXI | GCAGC | 1 cut(s) | 275 |
| BsgI | GTGCAG | 1 cut(s) | 282 |
| Bsp1407I | TGTACA | 1 cut(s) | 218 |
| Bsp143I | GATC | 1 cut(s) | 67 |
| BspACI | CCGC | 1 cut(s) | 33 |
| BsrGI | TGTACA | 1 cut(s) | 218 |
| BssMI | GATC | 1 cut(s) | 67 |
| BstAUI | TGTACA | 1 cut(s) | 218 |
| BstDEI | CTNAG | 1 cut(s) | 105 |
| BstKTI | GATC | 1 cut(s) | 70 |
| BstMBI | GATC | 1 cut(s) | 67 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 184, 269 |
| BstNSI | RCATGY | 1 cut(s) | 292 |
| BstV1I | GCAGC | 1 cut(s) | 275 |
| Csp6I | GTAC | 2 cut(s) | 56, 219 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 123, 158 |
| CviAII | CATG | 3 cut(s) | 101, 137, 289 |
| CviJI | RGCY | 4 cut(s) | 36, 63, 87, 266 |
| CviKI_1 | RGCY | 4 cut(s) | 36, 63, 87, 266 |
| CviQI | GTAC | 2 cut(s) | 56, 219 |
| DdeI | CTNAG | 1 cut(s) | 105 |
| DpnI | GATC | 1 cut(s) | 69 |
| DpnII | GATC | 1 cut(s) | 67 |
| FaeI | CATG | 3 cut(s) | 104, 140, 292 |
| FatI | CATG | 3 cut(s) | 100, 136, 288 |
| Fnu4HI | GCNGC | 2 cut(s) | 34, 264 |
| Fsp4HI | GCNGC | 2 cut(s) | 34, 264 |
| GluI | GCNGC | 2 cut(s) | 34, 264 |
| Hin1II | CATG | 3 cut(s) | 104, 140, 292 |
| HphI | GGTGA | 3 cut(s) | 152, 183, 256 |
| Hpy166II | GTNNAC | 1 cut(s) | 160 |
| Hpy8I | GTNNAC | 1 cut(s) | 160 |
| HpyAV | CCTTC | 1 cut(s) | 166 |
| HpyCH4V | TGCA | 4 cut(s) | 19, 131, 145, 263 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 184, 269 |
| HpyF3I | CTNAG | 1 cut(s) | 105 |
| Hsp92II | CATG | 3 cut(s) | 104, 140, 292 |
| Kzo9I | GATC | 1 cut(s) | 67 |
| LmnI | GCTCC | 1 cut(s) | 175 |
| LpnPI | CCDG | 4 cut(s) | 169, 207, 210, 258 |
| Lsp1109I | GCAGC | 1 cut(s) | 275 |
| MaeIII | GTNAC | 1 cut(s) | 189 |
| MalI | GATC | 1 cut(s) | 69 |
| MboI | GATC | 1 cut(s) | 67 |
| MfeI | CAATTG | 1 cut(s) | 20 |
| MluCI | AATT | 3 cut(s) | 20, 45, 72 |
| MseI | TTAA | 1 cut(s) | 111 |
| MunI | CAATTG | 1 cut(s) | 20 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 184, 269 |
| NdeII | GATC | 1 cut(s) | 67 |
| NlaIII | CATG | 3 cut(s) | 104, 140, 292 |
| NmuCI | GTSAC | 1 cut(s) | 189 |
| NspI | RCATGY | 1 cut(s) | 292 |
| PkrI | GCNGC | 2 cut(s) | 35, 265 |
| PsiI | TTATAA | 1 cut(s) | 201 |
| RsaI | GTAC | 2 cut(s) | 57, 220 |
| RsaNI | GTAC | 2 cut(s) | 56, 219 |
| SaqAI | TTAA | 1 cut(s) | 111 |
| SatI | GCNGC | 2 cut(s) | 34, 264 |
| Sau3AI | GATC | 1 cut(s) | 67 |
| SetI | ASST | 5 cut(s) | 111, 196, 207, 262, 268 |
| Sse9I | AATT | 3 cut(s) | 20, 45, 72 |
| SsiI | CCGC | 1 cut(s) | 33 |
| TaqI | TCGA | 1 cut(s) | 66 |
| TasI | AATT | 3 cut(s) | 20, 45, 72 |
| TatI | WGTACW | 1 cut(s) | 218 |
| TauI | GCSGC | 1 cut(s) | 36 |
| Tru1I | TTAA | 1 cut(s) | 111 |
| Tru9I | TTAA | 1 cut(s) | 111 |
| TseFI | GTSAC | 1 cut(s) | 189 |
| TseI | GCWGC | 1 cut(s) | 263 |
| Tsp45I | GTSAC | 1 cut(s) | 189 |
| XapI | RAATTY | 1 cut(s) | 72 |
| XceI | RCATGY | 1 cut(s) | 292 |