Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01740 |
| prunus_persica | Prupe.1G333800_v2.0.a1 Prupe.1G333800_v2.0.a1 Prupe.1G333800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0123271 RchiOBHm_Chr4g0442881 RchiOBHm_Chr4g0442961 RchiOBHm_Chr4g0443001 |
| rosa_laevigata | RLG00000005963 RLG00000005969 RLG00000005972 RLG00000005974 RLG00000010013 |
| rosa_multiflora | Rmu_sc0001917.1_g000006 Rmu_sc0005806.1_g000015 Rmu_sc0007295.1_g000001 Rmu_sc0014119.1_g000001 Rmu_ssc0000204.1_g000003 Rmu_ssc0000204.1_g000010 |
| rosa_roxburghii | Rroxscaffold_5G00383640 |
| rosa_samantha | Rh2BG311500 Rh4AG397900 Rh4BG409100 Rh4BG409400 Rh4CG424900 Rh4DG403700 Rh4DG404200 |
| rosa_wichuraiana | Rw4G034270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 200 |
| AccI | GTMKAC | 1 cut(s) | 222 |
| AciI | CCGC | 2 cut(s) | 48, 109 |
| AcuI | CTGAAG | 2 cut(s) | 400, 431 |
| AgsI | TTSAA | 3 cut(s) | 190, 205, 248 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 197, 229 |
| AluBI | AGCT | 2 cut(s) | 194, 272 |
| AluI | AGCT | 2 cut(s) | 194, 272 |
| Alw21I | GWGCWC | 1 cut(s) | 366 |
| Alw26I | GTCTC | 2 cut(s) | 73, 401 |
| AoxI | GGCC | 1 cut(s) | 73 |
| ApeKI | GCWGC | 1 cut(s) | 50 |
| Bbv12I | GWGCWC | 1 cut(s) | 366 |
| BbvI | GCAGC | 1 cut(s) | 37 |
| BccI | CCATC | 3 cut(s) | 20, 271, 365 |
| BceAI | ACGGC | 1 cut(s) | 298 |
| BcoDI | GTCTC | 2 cut(s) | 73, 401 |
| BfmI | CTRYAG | 1 cut(s) | 223 |
| BfuAI | ACCTGC | 1 cut(s) | 200 |
| BisI | GCNGC | 2 cut(s) | 48, 51 |
| BlsI | GCNGC | 2 cut(s) | 49, 52 |
| BmsI | GCATC | 3 cut(s) | 34, 96, 244 |
| BpmI | CTGGAG | 1 cut(s) | 132 |
| BsaI | GGTCTC | 1 cut(s) | 73 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 51, 81 |
| BseGI | GGATG | 3 cut(s) | 31, 184, 381 |
| BseMII | CTCAG | 1 cut(s) | 84 |
| BseRI | GAGGAG | 1 cut(s) | 323 |
| BseXI | GCAGC | 1 cut(s) | 37 |
| BshFI | GGCC | 1 cut(s) | 75 |
| BsiHKAI | GWGCWC | 1 cut(s) | 366 |
| BsmAI | GTCTC | 2 cut(s) | 73, 401 |
| BsmBI | CGTCTC | 1 cut(s) | 401 |
| BsnI | GGCC | 1 cut(s) | 75 |
| Bso31I | GGTCTC | 1 cut(s) | 73 |
| Bsp1286I | GDGCHC | 1 cut(s) | 366 |
| Bsp143I | GATC | 1 cut(s) | 411 |
| BspACI | CCGC | 2 cut(s) | 48, 109 |
| BspANI | GGCC | 1 cut(s) | 75 |
| BspCNI | CTCAG | 1 cut(s) | 83 |
| BspMI | ACCTGC | 1 cut(s) | 200 |
| BspTNI | GGTCTC | 1 cut(s) | 73 |
| BssMI | GATC | 1 cut(s) | 411 |
| Bst4CI | ACNGT | 1 cut(s) | 361 |
| BstC8I | GCNNGC | 2 cut(s) | 196, 293 |
| BstDEI | CTNAG | 1 cut(s) | 70 |
| BstF5I | GGATG | 3 cut(s) | 31, 184, 381 |
| BstKTI | GATC | 1 cut(s) | 414 |
| BstMAI | GTCTC | 2 cut(s) | 73, 401 |
| BstMBI | GATC | 1 cut(s) | 411 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 327 |
| BstSFI | CTRYAG | 1 cut(s) | 223 |
| BstV1I | GCAGC | 1 cut(s) | 37 |
| BsuRI | GGCC | 1 cut(s) | 75 |
| BtgZI | GCGATG | 1 cut(s) | 119 |
| BtsCI | GGATG | 3 cut(s) | 31, 184, 381 |
| BtsIMutI | CAGTG | 1 cut(s) | 424 |
| BveI | ACCTGC | 1 cut(s) | 200 |
| Cac8I | GCNNGC | 2 cut(s) | 196, 293 |
| CviAII | CATG | 2 cut(s) | 133, 296 |
| CviJI | RGCY | 7 cut(s) | 75, 194, 272, 285, 321, 341, 432 |
| CviKI_1 | RGCY | 7 cut(s) | 75, 194, 272, 285, 321, 341, 432 |
| DdeI | CTNAG | 1 cut(s) | 70 |
| DpnI | GATC | 1 cut(s) | 413 |
| DpnII | GATC | 1 cut(s) | 411 |
| Eco147I | AGGCCT | 1 cut(s) | 75 |
| Eco31I | GGTCTC | 1 cut(s) | 73 |
| Eco57I | CTGAAG | 2 cut(s) | 400, 431 |
| Esp3I | CGTCTC | 1 cut(s) | 401 |
| FaeI | CATG | 2 cut(s) | 136, 299 |
| FatI | CATG | 2 cut(s) | 132, 295 |
| FauI | CCCGC | 1 cut(s) | 102 |
| FauNDI | CATATG | 1 cut(s) | 55 |
| FblI | GTMKAC | 1 cut(s) | 222 |
| Fnu4HI | GCNGC | 2 cut(s) | 48, 51 |
| FokI | GGATG | 3 cut(s) | 38, 191, 388 |
| Fsp4HI | GCNGC | 2 cut(s) | 48, 51 |
| GluI | GCNGC | 2 cut(s) | 48, 51 |
| GsuI | CTGGAG | 1 cut(s) | 132 |
| HaeIII | GGCC | 1 cut(s) | 75 |
| Hin1II | CATG | 2 cut(s) | 136, 299 |
| HincII | GTYRAC | 1 cut(s) | 165 |
| HindII | GTYRAC | 1 cut(s) | 165 |
| Hpy166II | GTNNAC | 2 cut(s) | 165, 223 |
| Hpy188III | TCNNGA | 2 cut(s) | 41, 149 |
| Hpy8I | GTNNAC | 2 cut(s) | 165, 223 |
| HpyAV | CCTTC | 1 cut(s) | 24 |
| HpyCH4III | ACNGT | 1 cut(s) | 361 |
| HpyCH4V | TGCA | 4 cut(s) | 53, 291, 330, 437 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 327 |
| HpyF3I | CTNAG | 1 cut(s) | 70 |
| Hsp92II | CATG | 2 cut(s) | 136, 299 |
| Kzo9I | GATC | 1 cut(s) | 411 |
| LpnPI | CCDG | 5 cut(s) | 57, 162, 180, 195, 264 |
| Lsp1109I | GCAGC | 1 cut(s) | 37 |
| LweI | GCATC | 3 cut(s) | 34, 96, 244 |
| MaeIII | GTNAC | 1 cut(s) | 115 |
| MalI | GATC | 1 cut(s) | 413 |
| MboI | GATC | 1 cut(s) | 411 |
| MboII | GAAGA | 3 cut(s) | 398, 406, 437 |
| MhlI | GDGCHC | 1 cut(s) | 366 |
| MluCI | AATT | 1 cut(s) | 199 |
| MnlI | CCTC | 4 cut(s) | 86, 301, 304, 311 |
| MspA1I | CMGCKG | 1 cut(s) | 50 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 327 |
| NdeI | CATATG | 1 cut(s) | 55 |
| NdeII | GATC | 1 cut(s) | 411 |
| NlaIII | CATG | 2 cut(s) | 136, 299 |
| PceI | AGGCCT | 1 cut(s) | 75 |
| PkrI | GCNGC | 2 cut(s) | 49, 52 |
| SatI | GCNGC | 2 cut(s) | 48, 51 |
| Sau3AI | GATC | 1 cut(s) | 411 |
| SduI | GDGCHC | 1 cut(s) | 366 |
| SetI | ASST | 3 cut(s) | 196, 214, 274 |
| SfaNI | GCATC | 3 cut(s) | 34, 96, 244 |
| SfcI | CTRYAG | 1 cut(s) | 223 |
| Sse9I | AATT | 1 cut(s) | 199 |
| SseBI | AGGCCT | 1 cut(s) | 75 |
| SsiI | CCGC | 2 cut(s) | 48, 109 |
| StuI | AGGCCT | 1 cut(s) | 75 |
| TaaI | ACNGT | 1 cut(s) | 361 |
| TaqI | TCGA | 2 cut(s) | 96, 306 |
| TasI | AATT | 1 cut(s) | 199 |
| TauI | GCSGC | 1 cut(s) | 50 |
| TscAI | CASTG | 1 cut(s) | 424 |
| TseI | GCWGC | 1 cut(s) | 50 |
| TspDTI | ATGAA | 2 cut(s) | 17, 342 |
| TspRI | CASTG | 1 cut(s) | 424 |
| XmiI | GTMKAC | 1 cut(s) | 222 |