Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0009557

Physical Location & Seq

Genomic Coordinates Forward (+)

68673281 .. 68677817

Gene Structure 4537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG486800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGAACCCCAATTAGCAGAGAGCTCCACCACCGCCCTGTTCCGGCTGCTCTTCCCATCCTCGAAAGCCGGGTCACTGATCGGCAAACTGGGCTCCGTCCCCGGCGCCAAGGTCCAATTCGATTACCCGACCCACGGCGACGAATGCGTCGTCGTCATCCTCGCCGACCCGAACCCCCAATCCCCAGACGGGTCGCCCGCCCAGCAGGCCCTGGTTAGAGTTTTCAAGAGGATGGTGGATGAATTGGGCCAACCCGAAAACGGTAACGGTAACGGGTCGGTTTGCTGCTGCAGGTTGTTGATTGGGAGTGGCCAGGCTGGGTGTGTGCTTGGGAGAGGAGGGAAGGTGGTGGAGAAGATGAGGCAGGACAGTGGGGCCCAAGTTAGAGTCTTTCCCAGAGATCAGATCCCGCCCTGTGCTTCTGCCGGAGATGAGTTGATCCAGATAACAGGAGACTTTTCAGCTGTGAAGAAAGCACTTCTGTCTGTTTCTGGTTGCCTTCTGGATAATGCTAAGGTAGATGCAGCCAACTCTAGCGCTACCAAAGTTTCGGGGGGGTCGATCCATGGAACTGGTATGCCTGCACAAGTTGACTCTGTTCCTCATCGGGGTTTTGTGTCTAGCTTTAATGCTGTAGATTATCAGTCCAGGAGTTACTCTTCTAATTCTGCGCCAGATAACAGCAGTCAACGAATGGCTATGGAAGAAGATGTGGTATTTAAGTTGTTATGCCAACATGATAAGGTTGGTAGTCTGATAGGGAAAGGTGGCTCCATTATACGAACTTTTCAAAGTGAAACAGGTGCATCTATCAAGATTGTTGATGCTGCACCTGATTCGGATGAGCGGGTTGTTGTCATATCTGCACAAGAGAATCCTGAGCAAAATTATTCCCCCGCACAAGAAGCTGTTATGCGTGTGCATCATCGAATTGCGGAGATTGGATTTGAACCTGGTGCTGCAGTAGTGGCTAGGCTCCTCCTACATCCACAGCAGATAGGTTGTTTATTGGGTAAAGGAGGTTTCATTATTAATGAAATGAGGCGAGCTACTGGTGCTAGTATTAGGATTTTTCCAAAAGAACAAGTTCAGAAATCTGCTTACCACCATGATGACGTTGTACAGGTTATTGGAAGTTTGCAGTCTGTACAGGATGCACTCTTTCATATCACAAGTAGGATTCGTGAAGCCATATTCCCAATGAAACAATCATATCCAAATTTTGGTGCCCCACCGTACATGTCTTCATTTCCTGAGATGCCTCCCCCCTCATTTAGACCGAGGCATAATTCAACCTCCCCTGGTGCGTATCCTTCACCTGTTGGATTCCATCATGGAATGGATCATTCTGCTTTTCGATCCCAACCTCCAGACCACCAGTCCCCATTTTCACATGGGGATCACAGTGGTCTATCTCACATGGACCGAGTTCCGTATTCTTATGGTGGTGAGCGTCCAGGACATGGTCCGGCATTTGAGAGATCTTCTCCAAGAGCGTGGACTCCCCAGGGAGTAAGCTCTGGAAACCTAAGGGAAATTGGAGATGCTAATTTGGGCTTGGCTCCAAGGAGTGGGTCTCTACGAAGCGGCTGTCAACCACCTCAGTTAACCAGCACAACCATCGAGATCATGATTCCTCAAGCATTCATGACTCACGTTTATGGAGAGAACAACAGTAATCTGAATCAGATTCGGCAGGTAGGTTTACACGTCGTGTTATTACTTTATAGTTTATACTGTAACAGACAGAATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

585

Amino Acids

62.92

Weight (kDa)

7.06

Isoelectric Point (pI)

48.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	98 - 160	3e-11	KH domain
KH_1	PF00013	240 - 291	1.2e-13	KH domain
KH_1	PF00013	325 - 391	2.4e-11	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51580
fragaria_vesca	FvH4_6g37150 FvH4_6g37150 FvH4_6g37150
malus_domestica	MD09G1161100.v1.1 MD17G1146900.v1.1
prunus_persica	Prupe.3G020000_v2.0.a1 Prupe.3G020000_v2.0.a1
pyrus_communis	pycom09g07950 pycom17g13960
rosa_chinensis	RchiOBHm_Chr2g0149721
rosa_laevigata	RLG00000020442
rosa_multiflora	Rmu_sc0001091.1_g000008
rosa_roxburghii	Rroxscaffold_2G00097760
rosa_rugosa	Rorug02G0415600 Rorug02G0415700 Rorug02G0415800
rosa_samantha	Rh2AG475400 Rh2BG486800 Rh2CG461000 Rh2DG496000
rosa_wichuraiana	Rw2G038740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	146
Acc36I	ACCTGC	2 cut(s)	282, 1687
AccB1I	GGYRCC	2 cut(s)	104, 1226
AccB7I	CCANNNNNTGG	3 cut(s)	1223, 1463, 1571
AccBSI	CCGCTC	1 cut(s)	847
AciI	CCGC	7 cut(s)	33, 198, 410, 847, 897, 935, 1587
AclWI	GGATC	6 cut(s)	400, 433, 556, 1350, 1353, 1407
AcoI	YGGCCR	1 cut(s)	310
AcsI	RAATTY	1 cut(s)	1219
AcyI	GRCGYC	1 cut(s)	105
AdeI	CACNNNGTG	1 cut(s)	1714
AfaI	GTAC	3 cut(s)	1122, 1149, 1238
AfeI	AGCGCT	1 cut(s)	538
AfiI	CCNNNNNNNGG	8 cut(s)	42, 134, 189, 260, 608, 1223, 1463, 1571
AflIII	ACRYGT	2 cut(s)	1239, 1708
AgsI	TTSAA	4 cut(s)	226, 791, 950, 1293
AhdI	GACNNNNNGTC	1 cut(s)	1378
AjiI	CACGTC	1 cut(s)	1711
AjnI	CCWGG	7 cut(s)	210, 312, 647, 952, 1300, 1456, 1506
AjuI	GAANNNNNNNTTGG	2 cut(s)	101, 133
AloI	GAACNNNNNNTCC	2 cut(s)	164, 196
AluBI	AGCT	6 cut(s)	24, 464, 624, 908, 1049, 1518
AluI	AGCT	6 cut(s)	24, 464, 624, 908, 1049, 1518
Alw21I	GWGCWC	1 cut(s)	26
Alw26I	GTCTC	2 cut(s)	447, 1581
AlwI	GGATC	6 cut(s)	400, 433, 556, 1350, 1353, 1407
AlwNI	CAGNNNCTG	1 cut(s)	211
Aor51HI	AGCGCT	1 cut(s)	538
AoxI	GGCC	4 cut(s)	207, 247, 310, 375
ApaI	GGGCCC	1 cut(s)	379
ApeKI	GCWGC	6 cut(s)	46, 285, 288, 524, 827, 959
ApoI	RAATTY	1 cut(s)	1219
ArsI	GACNNNNNNTTYG	6 cut(s)	56, 88, 135, 167, 1576, 1608
AseI	ATTAAT	1 cut(s)	1032
Asp700I	GAANNNNTTC	1 cut(s)	1086
AspLEI	GCGC	3 cut(s)	107, 539, 673
AspS9I	GGNCC	7 cut(s)	112, 208, 247, 375, 376, 1423, 1466
AsuC2I	CCSGG	2 cut(s)	70, 102
AsuHPI	GGTGA	2 cut(s)	1308, 1460
AvaII	GGWCC	3 cut(s)	112, 1423, 1466
AxyI	CCTNAGG	1 cut(s)	1529
BaeGI	GKGCMC	2 cut(s)	379, 1231
BalI	TGGCCA	1 cut(s)	312
BanI	GGYRCC	2 cut(s)	104, 1226
BanII	GRGCYC	3 cut(s)	26, 95, 379
BbsI	GAAGAC	1 cut(s)	1236
Bbv12I	GWGCWC	1 cut(s)	26
BbvI	GCAGC	6 cut(s)	33, 272, 275, 536, 814, 946
BccI	CCATC	4 cut(s)	64, 226, 1338, 1628
BceAI	ACGGC	1 cut(s)	151
BcgI	CGANNNNNNTGC	4 cut(s)	819, 853, 1603, 1637
BciT130I	CCWGG	7 cut(s)	212, 314, 649, 954, 1302, 1458, 1508
BciVI	GTATCC	1 cut(s)	1320
BcnI	CCSGG	2 cut(s)	70, 102
BcoDI	GTCTC	2 cut(s)	447, 1581
BfaI	CTAG	4 cut(s)	534, 621, 972, 1059
BfmI	CTRYAG	3 cut(s)	289, 633, 960
BfoI	RGCGCY	2 cut(s)	108, 540
BfuAI	ACCTGC	2 cut(s)	282, 1687
BfuI	GTATCC	1 cut(s)	1320
BglI	GCCNNNNNGGC	1 cut(s)	206
BglII	AGATCT	1 cut(s)	1481
BisI	GCNGC	7 cut(s)	47, 286, 289, 525, 828, 960, 1588
BlsI	GCNGC	7 cut(s)	48, 287, 290, 526, 829, 961, 1589
Bme1390I	CCNGG	9 cut(s)	70, 102, 212, 314, 649, 954, 1302, 1458, 1508
Bme18I	GGWCC	3 cut(s)	112, 1423, 1466
BmeRI	GACNNNNNGTC	1 cut(s)	1378
BmgBI	CACGTC	1 cut(s)	1711
BmgT120I	GGNCC	7 cut(s)	112, 208, 247, 375, 376, 1423, 1466
BmiI	GGNNCC	9 cut(s)	6, 94, 106, 376, 377, 772, 977, 1228, 1563
BmrFI	CCNGG	9 cut(s)	70, 102, 212, 314, 649, 954, 1302, 1458, 1508
BmrI	ACTGGG	1 cut(s)	98
BmsI	GCATC	7 cut(s)	511, 814, 815, 931, 1144, 1248, 1534
BmuI	ACTGGG	1 cut(s)	98
BpiI	GAAGAC	1 cut(s)	1236
BplI	GAGNNNNNCTC	4 cut(s)	1471, 1503, 1561, 1593
BpmI	CTGGAG	1 cut(s)	1353
Bpu10I	CCTNAGC	2 cut(s)	513, 879
BpuEI	CTTGAG	1 cut(s)	1623
BpuMI	CCSGG	2 cut(s)	70, 102
BsaHI	GRCGYC	1 cut(s)	105
BsaI	GGTCTC	1 cut(s)	1581
BsaXI	ACNNNNNCTCC	2 cut(s)	330, 360
Bsc4I	CCNNNNNNNGG	8 cut(s)	42, 134, 189, 260, 608, 1223, 1463, 1571
Bse1I	ACTGG	4 cut(s)	93, 577, 1057, 1378
Bse21I	CCTNAGG	1 cut(s)	1529
BseBI	CCWGG	7 cut(s)	212, 314, 649, 954, 1302, 1458, 1508
BseGI	GGATG	7 cut(s)	56, 156, 237, 244, 847, 985, 1159
BseLI	CCNNNNNNNGG	8 cut(s)	42, 134, 189, 260, 608, 1223, 1463, 1571
BseMII	CTCAG	3 cut(s)	870, 1245, 1616
BseNI	ACTGG	4 cut(s)	93, 577, 1057, 1378
BseRI	GAGGAG	2 cut(s)	351, 968
BseSI	GKGCMC	2 cut(s)	379, 1231
BseXI	GCAGC	6 cut(s)	33, 272, 275, 536, 814, 946
BseYI	CCCAGC	2 cut(s)	201, 317
BsgI	GTGCAG	3 cut(s)	567, 813, 849
BshFI	GGCC	4 cut(s)	209, 249, 312, 377
BshNI	GGYRCC	2 cut(s)	104, 1226
BsiHKAI	GWGCWC	1 cut(s)	26
BsiSI	CCGG	5 cut(s)	43, 69, 102, 426, 1469
BslFI	GGGAC	2 cut(s)	83, 1366
BslI	CCNNNNNNNGG	8 cut(s)	42, 134, 189, 260, 608, 1223, 1463, 1571
BsmAI	GTCTC	2 cut(s)	447, 1581
BsmFI	GGGAC	2 cut(s)	83, 1366
BsmI	GAATGC	2 cut(s)	149, 1643
BsnI	GGCC	4 cut(s)	209, 249, 312, 377
Bso31I	GGTCTC	1 cut(s)	1581
Bsp120I	GGGCCC	1 cut(s)	375
Bsp1286I	GDGCHC	4 cut(s)	26, 95, 379, 1231
Bsp1407I	TGTACA	2 cut(s)	1120, 1147
Bsp19I	CCATGG	1 cut(s)	565
BspACI	CCGC	7 cut(s)	33, 198, 410, 847, 897, 935, 1587
BspANI	GGCC	4 cut(s)	209, 249, 312, 377
BspCNI	CTCAG	3 cut(s)	871, 1246, 1615
BspHI	TCATGA	2 cut(s)	1629, 1647
BspLI	GGNNCC	9 cut(s)	6, 94, 106, 376, 377, 772, 977, 1228, 1563
BspMAI	CTGCAG	2 cut(s)	293, 964
BspMI	ACCTGC	2 cut(s)	282, 1687
BspPI	GGATC	6 cut(s)	400, 433, 556, 1350, 1353, 1407
BspQI	GCTCTTC	1 cut(s)	56
BspT107I	GGYRCC	2 cut(s)	104, 1226
BspTNI	GGTCTC	1 cut(s)	1581
BsrBI	CCGCTC	1 cut(s)	847
BsrGI	TGTACA	2 cut(s)	1120, 1147
BsrI	ACTGG	4 cut(s)	93, 577, 1057, 1378
BssNI	GRCGYC	1 cut(s)	105
BssT1I	CCWWGG	3 cut(s)	108, 565, 1565
Bst2UI	CCWGG	7 cut(s)	212, 314, 649, 954, 1302, 1458, 1508
Bst4CI	ACNGT	7 cut(s)	263, 269, 371, 1236, 1406, 1676, 1739
Bst6I	CTCTTC	2 cut(s)	56, 664
BstACI	GRCGYC	1 cut(s)	105
BstAUI	TGTACA	2 cut(s)	1120, 1147
BstC8I	GCNNGC	4 cut(s)	198, 207, 582, 1047
BstDEI	CTNAG	5 cut(s)	513, 879, 1254, 1529, 1602
BstDSI	CCRYGG	2 cut(s)	133, 565
BstF5I	GGATG	7 cut(s)	56, 156, 237, 244, 847, 985, 1159
BstH2I	RGCGCY	2 cut(s)	108, 540
BstHHI	GCGC	3 cut(s)	107, 539, 673
BstMAI	GTCTC	2 cut(s)	447, 1581
BstMWI	GCNNNNNNNGC	7 cut(s)	90, 144, 202, 206, 905, 968, 1055
BstNI	CCWGG	7 cut(s)	212, 314, 649, 954, 1302, 1458, 1508
BstNSI	RCATGY	1 cut(s)	1243
BstSCI	CCNGG	9 cut(s)	68, 100, 210, 312, 647, 952, 1300, 1456, 1506
BstSFI	CTRYAG	3 cut(s)	289, 633, 960
BstSLI	GKGCMC	2 cut(s)	379, 1231
BstV1I	GCAGC	6 cut(s)	33, 272, 275, 536, 814, 946
BstV2I	GAAGAC	1 cut(s)	1236
BstX2I	RGATCY	2 cut(s)	405, 1481
BstXI	CCANNNNNNTGG	2 cut(s)	572, 1497
BstYI	RGATCY	2 cut(s)	405, 1481
Bsu36I	CCTNAGG	1 cut(s)	1529
BsuI	GTATCC	1 cut(s)	1320
BsuRI	GGCC	4 cut(s)	209, 249, 312, 377
BtgI	CCRYGG	2 cut(s)	133, 565
BtrI	CACGTC	1 cut(s)	1711
BtsCI	GGATG	7 cut(s)	56, 156, 237, 244, 847, 985, 1159
BtsIMutI	CAGTG	3 cut(s)	74, 376, 1411
BveI	ACCTGC	2 cut(s)	282, 1687
Cac8I	GCNNGC	4 cut(s)	198, 207, 582, 1047
CaiI	CAGNNNCTG	1 cut(s)	211
CciI	TCATGA	2 cut(s)	1629, 1647
CfoI	GCGC	3 cut(s)	107, 539, 673
Cfr13I	GGNCC	7 cut(s)	112, 208, 247, 375, 376, 1423, 1466
CseI	GACGC	2 cut(s)	136, 1442
CsiI	ACCWGGT	1 cut(s)	952
Csp6I	GTAC	3 cut(s)	1121, 1148, 1237
CviQI	GTAC	3 cut(s)	1121, 1148, 1237
DdeI	CTNAG	5 cut(s)	513, 879, 1254, 1529, 1602
DinI	GGCGCC	1 cut(s)	106
DraIII	CACNNNGTG	1 cut(s)	1714
DrdI	GACNNNNNNGTC	1 cut(s)	146
DriI	GACNNNNNGTC	1 cut(s)	1378
DseDI	GACNNNNNNGTC	1 cut(s)	146
EaeI	YGGCCR	1 cut(s)	310
Eam1104I	CTCTTC	2 cut(s)	56, 664
Eam1105I	GACNNNNNGTC	1 cut(s)	1378
EarI	CTCTTC	2 cut(s)	56, 664
Ecl136II	GAGCTC	1 cut(s)	24
Eco130I	CCWWGG	3 cut(s)	108, 565, 1565
Eco24I	GRGCYC	3 cut(s)	26, 95, 379
Eco31I	GGTCTC	1 cut(s)	1581
Eco47I	GGWCC	3 cut(s)	112, 1423, 1466
Eco47III	AGCGCT	1 cut(s)	538
Eco53kI	GAGCTC	1 cut(s)	24
Eco81I	CCTNAGG	1 cut(s)	1529
EcoICRI	GAGCTC	1 cut(s)	24
EcoO109I	RGGNCCY	2 cut(s)	208, 375
EcoRII	CCWGG	7 cut(s)	210, 312, 647, 952, 1300, 1456, 1506
EcoT14I	CCWWGG	3 cut(s)	108, 565, 1565
EcoT38I	GRGCYC	3 cut(s)	26, 95, 379
EgeI	GGCGCC	1 cut(s)	106
EheI	GGCGCC	1 cut(s)	106
ErhI	CCWWGG	3 cut(s)	108, 565, 1565
FaqI	GGGAC	2 cut(s)	83, 1366
FauI	CCCGC	4 cut(s)	205, 417, 840, 904
Fnu4HI	GCNGC	7 cut(s)	47, 286, 289, 525, 828, 960, 1588
FokI	GGATG	7 cut(s)	43, 143, 244, 251, 854, 972, 1166
FriOI	GRGCYC	3 cut(s)	26, 95, 379
Fsp4HI	GCNGC	7 cut(s)	47, 286, 289, 525, 828, 960, 1588
FspBI	CTAG	4 cut(s)	534, 621, 972, 1059
GlaI	GCGC	3 cut(s)	106, 538, 672
GluI	GCNGC	7 cut(s)	47, 286, 289, 525, 828, 960, 1588
GsaI	CCCAGC	2 cut(s)	205, 321
GsuI	CTGGAG	1 cut(s)	1353
HaeII	RGCGCY	2 cut(s)	108, 540
HaeIII	GGCC	4 cut(s)	209, 249, 312, 377
HapII	CCGG	5 cut(s)	43, 69, 102, 426, 1469
HgaI	GACGC	2 cut(s)	136, 1442
HhaI	GCGC	3 cut(s)	107, 539, 673
Hin1I	GRCGYC	1 cut(s)	105
Hin6I	GCGC	3 cut(s)	105, 537, 671
HinP1I	GCGC	3 cut(s)	105, 537, 671
HincII	GTYRAC	4 cut(s)	592, 689, 1595, 1608
HindII	GTYRAC	4 cut(s)	592, 689, 1595, 1608
HpaI	GTTAAC	1 cut(s)	1608
HpaII	CCGG	5 cut(s)	43, 69, 102, 426, 1469
HphI	GGTGA	2 cut(s)	1308, 1460
Hpy166II	GTNNAC	6 cut(s)	592, 689, 1500, 1595, 1608, 1706
Hpy188I	TCNGA	6 cut(s)	405, 756, 841, 1092, 1683, 1689
Hpy8I	GTNNAC	6 cut(s)	592, 689, 1500, 1595, 1608, 1706
Hpy99I	CGWCG	4 cut(s)	143, 152, 155, 1715
HpyAV	CCTTC	3 cut(s)	337, 509, 1323
HpyCH4III	ACNGT	7 cut(s)	263, 269, 371, 1236, 1406, 1676, 1739
HpyCH4IV	ACGT	3 cut(s)	1116, 1656, 1710
HpyF10VI	GCNNNNNNNGC	7 cut(s)	90, 144, 202, 206, 905, 968, 1055
HpyF3I	CTNAG	5 cut(s)	513, 879, 1254, 1529, 1602
HpySE526I	ACGT	3 cut(s)	1116, 1656, 1710
Hsp92I	GRCGYC	1 cut(s)	105
HspAI	GCGC	3 cut(s)	105, 537, 671
KasI	GGCGCC	1 cut(s)	104
KspAI	GTTAAC	1 cut(s)	1608
LguI	GCTCTTC	1 cut(s)	56
LmnI	GCTCC	5 cut(s)	29, 98, 776, 981, 1567
Lsp1109I	GCAGC	6 cut(s)	33, 272, 275, 536, 814, 946
LweI	GCATC	7 cut(s)	511, 814, 815, 931, 1144, 1248, 1534
MabI	ACCWGGT	1 cut(s)	952
MaeI	CTAG	4 cut(s)	534, 621, 972, 1059
MaeII	ACGT	3 cut(s)	1116, 1656, 1710
MaeIII	GTNAC	5 cut(s)	72, 263, 269, 653, 1739
MbiI	CCGCTC	1 cut(s)	847
MboII	GAAGA	8 cut(s)	43, 367, 481, 651, 716, 719, 1236, 1476
MflI	RGATCY	2 cut(s)	405, 1481
MhlI	GDGCHC	4 cut(s)	26, 95, 379, 1231
MlsI	TGGCCA	1 cut(s)	312
MluNI	TGGCCA	1 cut(s)	312
Mly113I	GGCGCC	1 cut(s)	105
MlyI	GAGTC	4 cut(s)	396, 587, 1495, 1645
MmeI	TCCRAC	1 cut(s)	1303
Mox20I	TGGCCA	1 cut(s)	312
MroXI	GAANNNNTTC	1 cut(s)	1086
MscI	TGGCCA	1 cut(s)	312
MseI	TTAA	4 cut(s)	627, 720, 1032, 1607
MslI	CAYNNNNRTG	2 cut(s)	1110, 1659
Msp20I	TGGCCA	1 cut(s)	312
MspA1I	CMGCKG	1 cut(s)	464
MspI	CCGG	5 cut(s)	43, 69, 102, 426, 1469
MspR9I	CCNGG	9 cut(s)	70, 102, 212, 314, 649, 954, 1302, 1458, 1508
Mva1269I	GAATGC	2 cut(s)	149, 1643
MvaI	CCWGG	7 cut(s)	212, 314, 649, 954, 1302, 1458, 1508
MwoI	GCNNNNNNNGC	7 cut(s)	90, 144, 202, 206, 905, 968, 1055
NarI	GGCGCC	1 cut(s)	105
NciI	CCSGG	2 cut(s)	70, 102
NcoI	CCATGG	1 cut(s)	565
NlaIV	GGNNCC	9 cut(s)	6, 94, 106, 376, 377, 772, 977, 1228, 1563
NmuCI	GTSAC	1 cut(s)	72
NspI	RCATGY	1 cut(s)	1243
PagI	TCATGA	2 cut(s)	1629, 1647
PasI	CCCWGGG	1 cut(s)	1507
PciI	ACATGT	1 cut(s)	1239
PciSI	GCTCTTC	1 cut(s)	56
PcsI	WCGNNNNNNNCGW	2 cut(s)	147, 557
PctI	GAATGC	2 cut(s)	149, 1643
PdmI	GAANNNNTTC	1 cut(s)	1086
PfeI	GAWTC	7 cut(s)	836, 874, 1180, 1326, 1633, 1684, 1690
PflFI	GACNNNGTC	1 cut(s)	1464
PflMI	CCANNNNNTGG	3 cut(s)	1223, 1463, 1571
PfoI	TCCNGGA	2 cut(s)	647, 1456
PkrI	GCNGC	7 cut(s)	48, 287, 290, 526, 829, 961, 1589
PleI	GAGTC	4 cut(s)	395, 587, 1495, 1645
PluTI	GGCGCC	1 cut(s)	108
PpsI	GAGTC	4 cut(s)	395, 587, 1495, 1645
PscI	ACATGT	1 cut(s)	1239
PshBI	ATTAAT	1 cut(s)	1032
Psp124BI	GAGCTC	1 cut(s)	26
Psp6I	CCWGG	7 cut(s)	210, 312, 647, 952, 1300, 1456, 1506
PspFI	CCCAGC	2 cut(s)	201, 317
PspGI	CCWGG	7 cut(s)	210, 312, 647, 952, 1300, 1456, 1506
PspN4I	GGNNCC	9 cut(s)	6, 94, 106, 376, 377, 772, 977, 1228, 1563
PspOMI	GGGCCC	1 cut(s)	375
PspPI	GGNCC	7 cut(s)	112, 208, 247, 375, 376, 1423, 1466
PstI	CTGCAG	2 cut(s)	293, 964
PstNI	CAGNNNCTG	1 cut(s)	211
PsuI	RGATCY	2 cut(s)	405, 1481
PsyI	GACNNNGTC	1 cut(s)	1464
PvuII	CAGCTG	1 cut(s)	464
RsaI	GTAC	3 cut(s)	1122, 1149, 1238
RsaNI	GTAC	3 cut(s)	1121, 1148, 1237
RseI	CAYNNNNRTG	2 cut(s)	1110, 1659
SacI	GAGCTC	1 cut(s)	26
SapI	GCTCTTC	1 cut(s)	56
SaqAI	TTAA	4 cut(s)	627, 720, 1032, 1607
SatI	GCNGC	7 cut(s)	47, 286, 289, 525, 828, 960, 1588
Sau96I	GGNCC	7 cut(s)	112, 208, 247, 375, 376, 1423, 1466
SchI	GAGTC	4 cut(s)	396, 587, 1495, 1645
ScrFI	CCNGG	9 cut(s)	70, 102, 212, 314, 649, 954, 1302, 1458, 1508
SduI	GDGCHC	4 cut(s)	26, 95, 379, 1231
SexAI	ACCWGGT	1 cut(s)	952
SfaNI	GCATC	7 cut(s)	511, 814, 815, 931, 1144, 1248, 1534
SfcI	CTRYAG	3 cut(s)	289, 633, 960
SfoI	GGCGCC	1 cut(s)	106
SinI	GGWCC	3 cut(s)	112, 1423, 1466
SmiMI	CAYNNNNRTG	2 cut(s)	1110, 1659
SmlI	CTYRAG	1 cut(s)	1638
SmoI	CTYRAG	1 cut(s)	1638
SsiI	CCGC	7 cut(s)	33, 198, 410, 847, 897, 935, 1587
SspDI	GGCGCC	1 cut(s)	104
SspMI	CTAG	4 cut(s)	534, 621, 972, 1059
SstI	GAGCTC	1 cut(s)	26
StyD4I	CCNGG	9 cut(s)	68, 100, 210, 312, 647, 952, 1300, 1456, 1506
StyI	CCWWGG	3 cut(s)	108, 565, 1565
TaaI	ACNGT	7 cut(s)	263, 269, 371, 1236, 1406, 1676, 1739
TaiI	ACGT	3 cut(s)	1119, 1659, 1713
TaqI	TCGA	6 cut(s)	62, 120, 560, 928, 1357, 1623
TaqII	GACCGA	2 cut(s)	1294, 1440
TatI	WGTACW	2 cut(s)	1120, 1147
TauI	GCSGC	1 cut(s)	1590
TfiI	GAWTC	7 cut(s)	836, 874, 1180, 1326, 1633, 1684, 1690
Tru1I	TTAA	4 cut(s)	627, 720, 1032, 1607
Tru9I	TTAA	4 cut(s)	627, 720, 1032, 1607
TscAI	CASTG	3 cut(s)	81, 376, 1411
TseFI	GTSAC	1 cut(s)	72
TseI	GCWGC	6 cut(s)	46, 285, 288, 524, 827, 959
Tsp45I	GTSAC	1 cut(s)	72
TspDTI	ATGAA	7 cut(s)	255, 1015, 1050, 1154, 1217, 1236, 1636
TspGWI	ACGGA	2 cut(s)	85, 1422
TspRI	CASTG	3 cut(s)	81, 376, 1411
Tth111I	GACNNNGTC	1 cut(s)	1464
Van91I	CCANNNNNTGG	3 cut(s)	1223, 1463, 1571
VpaK11BI	GGWCC	3 cut(s)	112, 1423, 1466
VspI	ATTAAT	1 cut(s)	1032
XapI	RAATTY	1 cut(s)	1219
XceI	RCATGY	1 cut(s)	1243
XmnI	GAANNNNTTC	1 cut(s)	1086
XspI	CTAG	4 cut(s)	534, 621, 972, 1059

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.