Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0009557

Physical Location & Seq

Genomic Coordinates Forward (+)

62390946 .. 62395110

Gene Structure 4165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG461000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGGAACCCCAATCAGCAGAGAGCTCCACCACCGCCGTGTTCCGGCTGCTCTTCCCATCCTCGAAAGCCGGGTCACTGATCGGCAAACTGGGCTCCGTCCCCGGCGCCAAGGTCCAATTCGATTACCCGACCCACGGCGACGAATGCGTCGTCGTCATCCTCGCCGACCCGAACCCCCAATCCCCAGACGGGTCCCCCGCCCAGCAGGCCCTGGTTAGGGTTTTCAAGAGGATGGTGGATGAATTGGGCCAGCCCGAAAACGGCAACGGTAACGGGTCGGTTTGCTGCTGCAGGTTGTTGATTGGGAGTGGCCAGGCTGGGTTTGTGCTTGGGAGAGGAGGGAAGGTGCTGGAGAAGATGAGGCAGGACAGTGGGGCCCAAGTTAGAGTCTTTCCCAGAGATCAGATCCCGCCCTGTGCTTCTGCCGGAGATGAGTTGATTCAGATAACAGGAGACTTTTCAGCTGTGAAGAAAGCACTTCTGTCTGTTTCTGGTTGCCTTCTGGATAATGCTAAGGTAGATGCAGCCAACTCTAGCGCTACCAAAGTCGCCAACTCTAGCGCTACCAAAGTTTCTGGGGGGTCGATCCATGGAACTGGTATGCCTGCACAAGTTGACTCTGTTCCTCATCGGGGTTTTGTGTCTAGCTTTAATGCTGTAGATTATCAGTCCAGGAGTTACTCTTCTAATTCTGCACCAGATAACAGCAGTCAACGAATGGCTATGGAAGAAGAGGTGGTATTTAAGTTGTTATGCCAACATGATAAGGTTGGTAGTCTGATAGGGAAAGGTGGCTCCATTATACGAACTTTTCAAAGTGAAACAGGTGCATCTATCAAGATTGTTGATGCTGCACCTGATTCGGATGAGCGGGTTGTTGTCATATCTGCACAAGAGAATCCTGAGCAAAATTATTCCCCCGCACAAGAAGCTGTTATGCGTGTGCATCATCGAATTGCGGAGATTGGATTTGAACCTGGTGCTGCAGTAGTGGCTAGGCTCCTCCTACATCCACAGCAGATAGGTTGTTTATTGGGTAAAGGAGGTTTTATTATTAATGAAATGAGGCGAGCTACTGGTGCTAGTATTAGGATTTTTCCAAAAGAACAAGTTCAGAAATCTGCTTACCACCATGATGACGTTGTACAGGTTATTGGAAGCTTGCAGTCTGTACAGGATGCACTCTTTCATATCACAAGTAGGATTCGTGAAGCCATATTCCCAATGAAACAATCATATCCAAATTTTGGTGCCCCACCGTACATGTCTTCATTTCCTGAGATGCCTCCCCCCTCATTTAGACCGAGGCATAATTCAACCTCCCCTGGTGCGTATCCTTCACCTGTTGGATTCCATCATGGAATGGATCATTCTGCTTTTCGATCCCAACCTCCAGACCACCAGTCCCCATTTTCACATGGGGATCACAGTGGTCTGTCTCACATGGACCGAGTTCCGTATTCTTATGGTGGTGAGCGTCCGGGACATGGTCCGGCATTTGAGAGATCTTCTCCAAGAGCGTGGACTCCCCAGGGAGTAAGCTCTGGAAACCTAAGGGAAATTGGAGATGCTAATTTGGGCTTGGCTCCAAGGAGTGGGTCTCTACGAAGCGGCTGTCAACCACCTCACTTAACCAGCACAACCATCGAGATCATGATTCCTCAAGCATTCATGACTCACGTTTATGGAGAGAACAACAGTAATCTGAATCAGATTCGGCAGGTAGGTTTACACGTCGTGTTATTACTTTATAGTTTATACTGTGACAGACAGAATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

593

Amino Acids

63.73

Weight (kDa)

7.08

Isoelectric Point (pI)

49.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	98 - 160	4.1e-11	KH domain
KH_1	PF00013	248 - 299	1.2e-13	KH domain
KH_1	PF00013	333 - 399	2.4e-11	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51580
fragaria_vesca	FvH4_6g37150 FvH4_6g37150 FvH4_6g37150
malus_domestica	MD09G1161100.v1.1 MD17G1146900.v1.1
prunus_persica	Prupe.3G020000_v2.0.a1 Prupe.3G020000_v2.0.a1
pyrus_communis	pycom09g07950 pycom17g13960
rosa_chinensis	RchiOBHm_Chr2g0149721
rosa_laevigata	RLG00000020442
rosa_multiflora	Rmu_sc0001091.1_g000008
rosa_roxburghii	Rroxscaffold_2G00097760
rosa_rugosa	Rorug02G0415600 Rorug02G0415700 Rorug02G0415800
rosa_samantha	Rh2AG475400 Rh2BG486800 Rh2CG461000 Rh2DG496000
rosa_wichuraiana	Rw2G038740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	146
Acc36I	ACCTGC	2 cut(s)	282, 1711
AccB1I	GGYRCC	2 cut(s)	104, 1250
AccB7I	CCANNNNNTGG	2 cut(s)	1247, 1595
AccBSI	CCGCTC	1 cut(s)	871
AciI	CCGC	7 cut(s)	33, 198, 410, 871, 921, 959, 1611
AclWI	GGATC	5 cut(s)	400, 580, 1374, 1377, 1431
AcoI	YGGCCR	1 cut(s)	310
AcsI	RAATTY	1 cut(s)	1243
AcyI	GRCGYC	1 cut(s)	105
AdeI	CACNNNGTG	1 cut(s)	1738
AfaI	GTAC	3 cut(s)	1146, 1173, 1262
AfeI	AGCGCT	2 cut(s)	538, 562
AflIII	ACRYGT	2 cut(s)	1263, 1732
AgsI	TTSAA	4 cut(s)	226, 815, 974, 1317
AhdI	GACNNNNNGTC	1 cut(s)	1402
AjiI	CACGTC	1 cut(s)	1735
AjnI	CCWGG	6 cut(s)	210, 312, 671, 976, 1324, 1530
AjuI	GAANNNNNNNTTGG	2 cut(s)	101, 133
AleI	CACNNNNGTG	1 cut(s)	35
AloI	GAACNNNNNNTCC	2 cut(s)	164, 196
AluBI	AGCT	7 cut(s)	24, 464, 648, 932, 1073, 1161, 1542
AluI	AGCT	7 cut(s)	24, 464, 648, 932, 1073, 1161, 1542
Alw21I	GWGCWC	1 cut(s)	26
Alw26I	GTCTC	3 cut(s)	447, 1443, 1605
AlwI	GGATC	5 cut(s)	400, 580, 1374, 1377, 1431
AlwNI	CAGNNNCTG	1 cut(s)	211
Aor51HI	AGCGCT	2 cut(s)	538, 562
AoxI	GGCC	4 cut(s)	207, 247, 310, 375
ApaI	GGGCCC	1 cut(s)	379
ApeKI	GCWGC	6 cut(s)	46, 285, 288, 524, 851, 983
ApoI	RAATTY	1 cut(s)	1243
ArsI	GACNNNNNNTTYG	6 cut(s)	56, 88, 135, 167, 1600, 1632
AseI	ATTAAT	1 cut(s)	1056
Asp700I	GAANNNNTTC	1 cut(s)	1110
AspLEI	GCGC	3 cut(s)	107, 539, 563
AspS9I	GGNCC	8 cut(s)	112, 192, 208, 247, 375, 376, 1447, 1490
AsuC2I	CCSGG	3 cut(s)	70, 102, 1482
AsuHPI	GGTGA	2 cut(s)	1332, 1484
AvaII	GGWCC	4 cut(s)	112, 192, 1447, 1490
AxyI	CCTNAGG	1 cut(s)	1553
BaeGI	GKGCMC	2 cut(s)	379, 1255
BalI	TGGCCA	1 cut(s)	312
BanI	GGYRCC	2 cut(s)	104, 1250
BanII	GRGCYC	3 cut(s)	26, 95, 379
BbsI	GAAGAC	1 cut(s)	1260
Bbv12I	GWGCWC	1 cut(s)	26
BbvI	GCAGC	6 cut(s)	33, 272, 275, 536, 838, 970
BccI	CCATC	4 cut(s)	64, 226, 1362, 1652
BceAI	ACGGC	3 cut(s)	20, 151, 277
BcgI	CGANNNNNNTGC	4 cut(s)	843, 877, 1627, 1661
BciT130I	CCWGG	6 cut(s)	212, 314, 673, 978, 1326, 1532
BciVI	GTATCC	1 cut(s)	1344
BcnI	CCSGG	3 cut(s)	70, 102, 1482
BcoDI	GTCTC	3 cut(s)	447, 1443, 1605
BfaI	CTAG	5 cut(s)	534, 558, 645, 996, 1083
BfmI	CTRYAG	3 cut(s)	289, 657, 984
BfoI	RGCGCY	3 cut(s)	108, 540, 564
BfuAI	ACCTGC	2 cut(s)	282, 1711
BfuI	GTATCC	1 cut(s)	1344
BglI	GCCNNNNNGGC	1 cut(s)	206
BglII	AGATCT	1 cut(s)	1505
BisI	GCNGC	7 cut(s)	47, 286, 289, 525, 852, 984, 1612
BlsI	GCNGC	7 cut(s)	48, 287, 290, 526, 853, 985, 1613
Bme1390I	CCNGG	9 cut(s)	70, 102, 212, 314, 673, 978, 1326, 1482, 1532
Bme18I	GGWCC	4 cut(s)	112, 192, 1447, 1490
BmeRI	GACNNNNNGTC	1 cut(s)	1402
BmgBI	CACGTC	1 cut(s)	1735
BmgT120I	GGNCC	8 cut(s)	112, 192, 208, 247, 375, 376, 1447, 1490
BmrFI	CCNGG	9 cut(s)	70, 102, 212, 314, 673, 978, 1326, 1482, 1532
BmrI	ACTGGG	1 cut(s)	98
BmsI	GCATC	7 cut(s)	511, 838, 839, 955, 1168, 1272, 1558
BmuI	ACTGGG	1 cut(s)	98
BpiI	GAAGAC	1 cut(s)	1260
BplI	GAGNNNNNCTC	4 cut(s)	1495, 1527, 1585, 1617
BpmI	CTGGAG	2 cut(s)	371, 1377
Bpu10I	CCTNAGC	2 cut(s)	513, 903
BpuEI	CTTGAG	1 cut(s)	1647
BpuMI	CCSGG	3 cut(s)	70, 102, 1482
BsaHI	GRCGYC	1 cut(s)	105
BsaI	GGTCTC	1 cut(s)	1605
BsaXI	ACNNNNNCTCC	2 cut(s)	330, 360
Bse1I	ACTGG	4 cut(s)	93, 601, 1081, 1402
Bse21I	CCTNAGG	1 cut(s)	1553
BseBI	CCWGG	6 cut(s)	212, 314, 673, 978, 1326, 1532
BseGI	GGATG	7 cut(s)	56, 156, 237, 244, 871, 1009, 1183
BseMII	CTCAG	2 cut(s)	894, 1269
BseNI	ACTGG	4 cut(s)	93, 601, 1081, 1402
BseRI	GAGGAG	2 cut(s)	351, 992
BseSI	GKGCMC	2 cut(s)	379, 1255
BseXI	GCAGC	6 cut(s)	33, 272, 275, 536, 838, 970
BseYI	CCCAGC	2 cut(s)	201, 317
BsgI	GTGCAG	4 cut(s)	591, 678, 837, 873
BshFI	GGCC	4 cut(s)	209, 249, 312, 377
BshNI	GGYRCC	2 cut(s)	104, 1250
BsiHKAI	GWGCWC	1 cut(s)	26
BsiSI	CCGG	6 cut(s)	43, 69, 102, 426, 1481, 1493
BslFI	GGGAC	4 cut(s)	83, 178, 1390, 1497
BsmAI	GTCTC	3 cut(s)	447, 1443, 1605
BsmFI	GGGAC	4 cut(s)	83, 178, 1390, 1497
BsmI	GAATGC	2 cut(s)	149, 1667
BsnI	GGCC	4 cut(s)	209, 249, 312, 377
Bso31I	GGTCTC	1 cut(s)	1605
Bsp120I	GGGCCC	1 cut(s)	375
Bsp1286I	GDGCHC	4 cut(s)	26, 95, 379, 1255
Bsp1407I	TGTACA	2 cut(s)	1144, 1171
Bsp143I	GATC	9 cut(s)	78, 400, 405, 585, 1366, 1382, 1423, 1505, 1650
Bsp19I	CCATGG	1 cut(s)	589
BspACI	CCGC	7 cut(s)	33, 198, 410, 871, 921, 959, 1611
BspANI	GGCC	4 cut(s)	209, 249, 312, 377
BspCNI	CTCAG	2 cut(s)	895, 1270
BspHI	TCATGA	2 cut(s)	1653, 1671
BspMAI	CTGCAG	2 cut(s)	293, 988
BspMI	ACCTGC	2 cut(s)	282, 1711
BspPI	GGATC	5 cut(s)	400, 580, 1374, 1377, 1431
BspQI	GCTCTTC	1 cut(s)	56
BspT107I	GGYRCC	2 cut(s)	104, 1250
BspTNI	GGTCTC	1 cut(s)	1605
BsrBI	CCGCTC	1 cut(s)	871
BsrGI	TGTACA	2 cut(s)	1144, 1171
BsrI	ACTGG	4 cut(s)	93, 601, 1081, 1402
BssMI	GATC	9 cut(s)	78, 400, 405, 585, 1366, 1382, 1423, 1505, 1650
BssNI	GRCGYC	1 cut(s)	105
BssT1I	CCWWGG	3 cut(s)	108, 589, 1589
Bst2UI	CCWGG	6 cut(s)	212, 314, 673, 978, 1326, 1532
Bst4CI	ACNGT	6 cut(s)	269, 371, 1260, 1430, 1700, 1763
Bst6I	CTCTTC	3 cut(s)	56, 688, 726
BstACI	GRCGYC	1 cut(s)	105
BstAUI	TGTACA	2 cut(s)	1144, 1171
BstC8I	GCNNGC	5 cut(s)	207, 251, 606, 1071, 1163
BstDEI	CTNAG	4 cut(s)	513, 903, 1278, 1553
BstDSI	CCRYGG	2 cut(s)	133, 589
BstF5I	GGATG	7 cut(s)	56, 156, 237, 244, 871, 1009, 1183
BstH2I	RGCGCY	3 cut(s)	108, 540, 564
BstHHI	GCGC	3 cut(s)	107, 539, 563
BstKTI	GATC	9 cut(s)	81, 403, 408, 588, 1369, 1385, 1426, 1508, 1653
BstMAI	GTCTC	3 cut(s)	447, 1443, 1605
BstMBI	GATC	9 cut(s)	78, 400, 405, 585, 1366, 1382, 1423, 1505, 1650
BstMWI	GCNNNNNNNGC	6 cut(s)	90, 144, 206, 929, 992, 1079
BstNI	CCWGG	6 cut(s)	212, 314, 673, 978, 1326, 1532
BstNSI	RCATGY	1 cut(s)	1267
BstSCI	CCNGG	9 cut(s)	68, 100, 210, 312, 671, 976, 1324, 1480, 1530
BstSFI	CTRYAG	3 cut(s)	289, 657, 984
BstSLI	GKGCMC	2 cut(s)	379, 1255
BstV1I	GCAGC	6 cut(s)	33, 272, 275, 536, 838, 970
BstV2I	GAAGAC	1 cut(s)	1260
BstX2I	RGATCY	2 cut(s)	405, 1505
BstXI	CCANNNNNNTGG	2 cut(s)	596, 1521
BstYI	RGATCY	2 cut(s)	405, 1505
Bsu36I	CCTNAGG	1 cut(s)	1553
BsuI	GTATCC	1 cut(s)	1344
BsuRI	GGCC	4 cut(s)	209, 249, 312, 377
BtgI	CCRYGG	2 cut(s)	133, 589
BtrI	CACGTC	1 cut(s)	1735
BtsCI	GGATG	7 cut(s)	56, 156, 237, 244, 871, 1009, 1183
BtsIMutI	CAGTG	3 cut(s)	74, 376, 1435
BveI	ACCTGC	2 cut(s)	282, 1711
Cac8I	GCNNGC	5 cut(s)	207, 251, 606, 1071, 1163
CaiI	CAGNNNCTG	1 cut(s)	211
CciI	TCATGA	2 cut(s)	1653, 1671
CfoI	GCGC	3 cut(s)	107, 539, 563
Cfr13I	GGNCC	8 cut(s)	112, 192, 208, 247, 375, 376, 1447, 1490
CseI	GACGC	2 cut(s)	136, 1466
CsiI	ACCWGGT	1 cut(s)	976
Csp6I	GTAC	3 cut(s)	1145, 1172, 1261
CviQI	GTAC	3 cut(s)	1145, 1172, 1261
DdeI	CTNAG	4 cut(s)	513, 903, 1278, 1553
DinI	GGCGCC	1 cut(s)	106
DpnI	GATC	9 cut(s)	80, 402, 407, 587, 1368, 1384, 1425, 1507, 1652
DpnII	GATC	9 cut(s)	78, 400, 405, 585, 1366, 1382, 1423, 1505, 1650
DraIII	CACNNNGTG	1 cut(s)	1738
DrdI	GACNNNNNNGTC	1 cut(s)	146
DriI	GACNNNNNGTC	1 cut(s)	1402
DseDI	GACNNNNNNGTC	1 cut(s)	146
EaeI	YGGCCR	1 cut(s)	310
Eam1104I	CTCTTC	3 cut(s)	56, 688, 726
Eam1105I	GACNNNNNGTC	1 cut(s)	1402
EarI	CTCTTC	3 cut(s)	56, 688, 726
Ecl136II	GAGCTC	1 cut(s)	24
Eco130I	CCWWGG	3 cut(s)	108, 589, 1589
Eco24I	GRGCYC	3 cut(s)	26, 95, 379
Eco31I	GGTCTC	1 cut(s)	1605
Eco47I	GGWCC	4 cut(s)	112, 192, 1447, 1490
Eco47III	AGCGCT	2 cut(s)	538, 562
Eco53kI	GAGCTC	1 cut(s)	24
Eco81I	CCTNAGG	1 cut(s)	1553
EcoICRI	GAGCTC	1 cut(s)	24
EcoO109I	RGGNCCY	3 cut(s)	192, 208, 375
EcoRII	CCWGG	6 cut(s)	210, 312, 671, 976, 1324, 1530
EcoT14I	CCWWGG	3 cut(s)	108, 589, 1589
EcoT38I	GRGCYC	3 cut(s)	26, 95, 379
EgeI	GGCGCC	1 cut(s)	106
EheI	GGCGCC	1 cut(s)	106
ErhI	CCWWGG	3 cut(s)	108, 589, 1589
FaqI	GGGAC	4 cut(s)	83, 178, 1390, 1497
FauI	CCCGC	4 cut(s)	205, 417, 864, 928
Fnu4HI	GCNGC	7 cut(s)	47, 286, 289, 525, 852, 984, 1612
FokI	GGATG	7 cut(s)	43, 143, 244, 251, 878, 996, 1190
FriOI	GRGCYC	3 cut(s)	26, 95, 379
Fsp4HI	GCNGC	7 cut(s)	47, 286, 289, 525, 852, 984, 1612
FspBI	CTAG	5 cut(s)	534, 558, 645, 996, 1083
GlaI	GCGC	3 cut(s)	106, 538, 562
GluI	GCNGC	7 cut(s)	47, 286, 289, 525, 852, 984, 1612
GsaI	CCCAGC	2 cut(s)	205, 321
GsuI	CTGGAG	2 cut(s)	371, 1377
HaeII	RGCGCY	3 cut(s)	108, 540, 564
HaeIII	GGCC	4 cut(s)	209, 249, 312, 377
HapII	CCGG	6 cut(s)	43, 69, 102, 426, 1481, 1493
HgaI	GACGC	2 cut(s)	136, 1466
HhaI	GCGC	3 cut(s)	107, 539, 563
Hin1I	GRCGYC	1 cut(s)	105
Hin6I	GCGC	3 cut(s)	105, 537, 561
HinP1I	GCGC	3 cut(s)	105, 537, 561
HincII	GTYRAC	3 cut(s)	616, 713, 1619
HindII	GTYRAC	3 cut(s)	616, 713, 1619
HindIII	AAGCTT	1 cut(s)	1159
HpaII	CCGG	6 cut(s)	43, 69, 102, 426, 1481, 1493
HphI	GGTGA	2 cut(s)	1332, 1484
Hpy166II	GTNNAC	5 cut(s)	616, 713, 1524, 1619, 1730
Hpy188I	TCNGA	7 cut(s)	405, 444, 780, 865, 1116, 1707, 1713
Hpy8I	GTNNAC	5 cut(s)	616, 713, 1524, 1619, 1730
Hpy99I	CGWCG	4 cut(s)	143, 152, 155, 1739
HpyAV	CCTTC	3 cut(s)	337, 509, 1347
HpyCH4III	ACNGT	6 cut(s)	269, 371, 1260, 1430, 1700, 1763
HpyCH4IV	ACGT	3 cut(s)	1140, 1680, 1734
HpyF10VI	GCNNNNNNNGC	6 cut(s)	90, 144, 206, 929, 992, 1079
HpyF3I	CTNAG	4 cut(s)	513, 903, 1278, 1553
HpySE526I	ACGT	3 cut(s)	1140, 1680, 1734
Hsp92I	GRCGYC	1 cut(s)	105
HspAI	GCGC	3 cut(s)	105, 537, 561
KasI	GGCGCC	1 cut(s)	104
KflI	GGGWCCC	1 cut(s)	192
Kzo9I	GATC	9 cut(s)	78, 400, 405, 585, 1366, 1382, 1423, 1505, 1650
LguI	GCTCTTC	1 cut(s)	56
LmnI	GCTCC	5 cut(s)	29, 98, 800, 1005, 1591
Lsp1109I	GCAGC	6 cut(s)	33, 272, 275, 536, 838, 970
LweI	GCATC	7 cut(s)	511, 838, 839, 955, 1168, 1272, 1558
MabI	ACCWGGT	1 cut(s)	976
MaeI	CTAG	5 cut(s)	534, 558, 645, 996, 1083
MaeII	ACGT	3 cut(s)	1140, 1680, 1734
MaeIII	GTNAC	4 cut(s)	72, 269, 677, 1763
MalI	GATC	9 cut(s)	80, 402, 407, 587, 1368, 1384, 1425, 1507, 1652
MbiI	CCGCTC	1 cut(s)	871
MboI	GATC	9 cut(s)	78, 400, 405, 585, 1366, 1382, 1423, 1505, 1650
MboII	GAAGA	8 cut(s)	43, 367, 481, 675, 740, 743, 1260, 1500
MflI	RGATCY	2 cut(s)	405, 1505
MhlI	GDGCHC	4 cut(s)	26, 95, 379, 1255
MlsI	TGGCCA	1 cut(s)	312
MluNI	TGGCCA	1 cut(s)	312
Mly113I	GGCGCC	1 cut(s)	105
MlyI	GAGTC	4 cut(s)	396, 611, 1519, 1669
MmeI	TCCRAC	1 cut(s)	1327
Mox20I	TGGCCA	1 cut(s)	312
MroXI	GAANNNNTTC	1 cut(s)	1110
MscI	TGGCCA	1 cut(s)	312
MseI	TTAA	4 cut(s)	651, 744, 1056, 1631
MslI	CAYNNNNRTG	3 cut(s)	35, 1134, 1683
Msp20I	TGGCCA	1 cut(s)	312
MspA1I	CMGCKG	1 cut(s)	464
MspI	CCGG	6 cut(s)	43, 69, 102, 426, 1481, 1493
MspR9I	CCNGG	9 cut(s)	70, 102, 212, 314, 673, 978, 1326, 1482, 1532
Mva1269I	GAATGC	2 cut(s)	149, 1667
MvaI	CCWGG	6 cut(s)	212, 314, 673, 978, 1326, 1532
MwoI	GCNNNNNNNGC	6 cut(s)	90, 144, 206, 929, 992, 1079
NarI	GGCGCC	1 cut(s)	105
NciI	CCSGG	3 cut(s)	70, 102, 1482
NcoI	CCATGG	1 cut(s)	589
NdeII	GATC	9 cut(s)	78, 400, 405, 585, 1366, 1382, 1423, 1505, 1650
NmuCI	GTSAC	2 cut(s)	72, 1763
NspI	RCATGY	1 cut(s)	1267
OliI	CACNNNNGTG	1 cut(s)	35
PagI	TCATGA	2 cut(s)	1653, 1671
PasI	CCCWGGG	1 cut(s)	1531
PciI	ACATGT	1 cut(s)	1263
PciSI	GCTCTTC	1 cut(s)	56
PcsI	WCGNNNNNNNCGW	1 cut(s)	147
PctI	GAATGC	2 cut(s)	149, 1667
PdmI	GAANNNNTTC	1 cut(s)	1110
PfeI	GAWTC	8 cut(s)	439, 860, 898, 1204, 1350, 1657, 1708, 1714
PflFI	GACNNNGTC	1 cut(s)	1488
PflMI	CCANNNNNTGG	2 cut(s)	1247, 1595
PfoI	TCCNGGA	2 cut(s)	671, 1480
PkrI	GCNGC	7 cut(s)	48, 287, 290, 526, 853, 985, 1613
PleI	GAGTC	4 cut(s)	395, 611, 1519, 1669
PluTI	GGCGCC	1 cut(s)	108
PpsI	GAGTC	4 cut(s)	395, 611, 1519, 1669
PpuMI	RGGWCCY	1 cut(s)	192
PscI	ACATGT	1 cut(s)	1263
PshBI	ATTAAT	1 cut(s)	1056
Psp124BI	GAGCTC	1 cut(s)	26
Psp5II	RGGWCCY	1 cut(s)	192
Psp6I	CCWGG	6 cut(s)	210, 312, 671, 976, 1324, 1530
PspFI	CCCAGC	2 cut(s)	201, 317
PspGI	CCWGG	6 cut(s)	210, 312, 671, 976, 1324, 1530
PspOMI	GGGCCC	1 cut(s)	375
PspPI	GGNCC	8 cut(s)	112, 192, 208, 247, 375, 376, 1447, 1490
PspPPI	RGGWCCY	1 cut(s)	192
PstI	CTGCAG	2 cut(s)	293, 988
PstNI	CAGNNNCTG	1 cut(s)	211
PsuI	RGATCY	2 cut(s)	405, 1505
PsyI	GACNNNGTC	1 cut(s)	1488
PvuII	CAGCTG	1 cut(s)	464
RsaI	GTAC	3 cut(s)	1146, 1173, 1262
RsaNI	GTAC	3 cut(s)	1145, 1172, 1261
RseI	CAYNNNNRTG	3 cut(s)	35, 1134, 1683
SacI	GAGCTC	1 cut(s)	26
SapI	GCTCTTC	1 cut(s)	56
SaqAI	TTAA	4 cut(s)	651, 744, 1056, 1631
SatI	GCNGC	7 cut(s)	47, 286, 289, 525, 852, 984, 1612
Sau3AI	GATC	9 cut(s)	78, 400, 405, 585, 1366, 1382, 1423, 1505, 1650
Sau96I	GGNCC	8 cut(s)	112, 192, 208, 247, 375, 376, 1447, 1490
SchI	GAGTC	4 cut(s)	396, 611, 1519, 1669
ScrFI	CCNGG	9 cut(s)	70, 102, 212, 314, 673, 978, 1326, 1482, 1532
SduI	GDGCHC	4 cut(s)	26, 95, 379, 1255
SexAI	ACCWGGT	1 cut(s)	976
SfaNI	GCATC	7 cut(s)	511, 838, 839, 955, 1168, 1272, 1558
SfcI	CTRYAG	3 cut(s)	289, 657, 984
SfoI	GGCGCC	1 cut(s)	106
SinI	GGWCC	4 cut(s)	112, 192, 1447, 1490
SmiMI	CAYNNNNRTG	3 cut(s)	35, 1134, 1683
SmlI	CTYRAG	1 cut(s)	1662
SmoI	CTYRAG	1 cut(s)	1662
SsiI	CCGC	7 cut(s)	33, 198, 410, 871, 921, 959, 1611
SspDI	GGCGCC	1 cut(s)	104
SspMI	CTAG	5 cut(s)	534, 558, 645, 996, 1083
SstI	GAGCTC	1 cut(s)	26
StyD4I	CCNGG	9 cut(s)	68, 100, 210, 312, 671, 976, 1324, 1480, 1530
StyI	CCWWGG	3 cut(s)	108, 589, 1589
TaaI	ACNGT	6 cut(s)	269, 371, 1260, 1430, 1700, 1763
TaiI	ACGT	3 cut(s)	1143, 1683, 1737
TaqI	TCGA	6 cut(s)	62, 120, 584, 952, 1381, 1647
TaqII	GACCGA	2 cut(s)	1318, 1464
TatI	WGTACW	2 cut(s)	1144, 1171
TauI	GCSGC	1 cut(s)	1614
TfiI	GAWTC	8 cut(s)	439, 860, 898, 1204, 1350, 1657, 1708, 1714
Tru1I	TTAA	4 cut(s)	651, 744, 1056, 1631
Tru9I	TTAA	4 cut(s)	651, 744, 1056, 1631
TscAI	CASTG	3 cut(s)	81, 376, 1435
TseFI	GTSAC	2 cut(s)	72, 1763
TseI	GCWGC	6 cut(s)	46, 285, 288, 524, 851, 983
Tsp45I	GTSAC	2 cut(s)	72, 1763
TspDTI	ATGAA	6 cut(s)	255, 1074, 1178, 1241, 1260, 1660
TspGWI	ACGGA	2 cut(s)	85, 1446
TspRI	CASTG	3 cut(s)	81, 376, 1435
Tth111I	GACNNNGTC	1 cut(s)	1488
Van91I	CCANNNNNTGG	2 cut(s)	1247, 1595
VpaK11BI	GGWCC	4 cut(s)	112, 192, 1447, 1490
VspI	ATTAAT	1 cut(s)	1056
XapI	RAATTY	1 cut(s)	1243
XceI	RCATGY	1 cut(s)	1267
XmnI	GAANNNNTTC	1 cut(s)	1110
XspI	CTAG	5 cut(s)	534, 558, 645, 996, 1083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.