Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0009557

Physical Location & Seq

Genomic Coordinates Forward (+)

71597183 .. 71600738

Gene Structure 3556 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG496000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGGAACCCCAATTAGCAGAGAGCTCCACCACCGCCCTGTTCCGGCTGCTCTTCCCATCCTCGAAAGCCGGGTCACTGATCGGCAAACTGGGCTCCGTCCCCGGCGCCAAGGTCCAATTCGATTACCCGACCCACGGCGACGAATGCGTCGTCGTCATCCTCGCCGACCCGAACCCCCAATCCCCAGACGGGTCGCCCGCCCAGCAGGCCCTGGTTAGAGTTTTCAAGAGGATGGTGGATGAATTGGGCCAACCCGAAAACGGTAACGGTAACGGGTCGGTTTGCTGCTGCAGGTTGTTGATTGGGAGTGGCCAGGCTGGGTGTGTGCTTGGGAGAGGAGGGAAGGTGGTGGAGAAGATGAGGCAGGACAGTGGGGCCCAAGTTAGAGTCTTTCCCAGAGATCAGATCCCGCCCTGTGCTTCTGCCGGAGATGAGTTGATCCAGATAACAGGAGACTTTTCAGCTGTGAAGAAAGCACTTCTGTCTGTTTCTGGTTGCCTTCTGGATAATGCTAAGGTAGATGCAGCCAACTCTAGCGCTACCAAAGTTTCGGGGGGGTCGATCCATGGAACTGGTATGCCTGCACAAGTTGACTCTGTTCCTCATCGGGGTTTTGTGTCTAGCTTTAATGCTGTAGATTATCAGTCCAGGAGTTACTCTTCTAATTCTGCGCCAGATAACAGCAGTCAACGAATGGCTATGGAAGAAGATGTGGTATTTAAGTTGTTATGCCAACATGATAAGGTTGGTAGTCTGATAGGGAAAGGTGGCTCCATTATACGAACTTTTCAAAGTGAAACAGGTGCATCTATCAAGATTGTTGATGCTGCACCTGATTCGGATGAGCGGGTTGTTGTCATATCTGCACAAGAGAATCCTGAGCAAAATTATTCCCCCGCACAAGAAGCTGTTATGCGTGTGCATCATCGAATTGCGGAGATTGGATTTGAACCTGGTGCTGCAGTAGTGGCTAGGCTCCTCCTACATCCACAGCAGATAGGTTGTTTATTGGGTAAAGGAGGTTTCATTATTAATGAAATGAGGCGAGCTACTGGTGCTAGTATTAGGATTTTTCCAAAAGAACAAGTTCAGAAATCTGCTTACCACCATGATGACGTTGTACAGGTTATTGGAAGTTTGCAGTCTGTACAGGATGCACTCTTTCATATCACAAGTAGGATTCGTGAAGCCATATTCCCAATGAAACAATCATATCCAAATTTTGGTGCCCCACCGTACATGTCTTCATTTCCTGAGATGCCTCCCCCCTCATTTAGACCGAGGCATAATTCAACCTCCCCTGGTGCGTATCCTTCACCTGTTGGATTCCATCATGGAATGGATCATTCTGCTTTTCGATCCCAACCTCCAGACCACCAGTCCCCATTTTCACATGGGGATCACAGTGGTCTATCTCACATGGACCGAGTTCCGTATTCTTATGGTGGTGAGCGTCCAGGACATGGTCCGGCATTTGAGAGATCTTCTCCAAGAGCGTGGACTCCCCAGGGAGTAAGCTCTGGAAACCTAAGGGAAATTGGAGATGCTAATTTGGGCTTGGCTCCAAGGAGTGGGTCTCTACGAAGCGGCTGTCAACCACCTCAGTTAACCAGCACAACCATCGAGATCATGATTCCTCAAGCATTCATGACTCACGTTTATGGAGAGAACAACAGTAATCTGAATCAGATTCGGCAGATATCAGGTGCAAATTTAGTTGTTCATGATTCAAAACCCGGATCTTTGGAAACCCAAGTTGTAGTATCCGGATCCCCAGATAAAACACATGCTGCTCAGAGCCTTATCCATGGTTTCATCCTTTGTGGTCAGACACAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

613

Amino Acids

65.46

Weight (kDa)

6.76

Isoelectric Point (pI)

47.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	98 - 160	3.2e-11	KH domain
KH_1	PF00013	240 - 291	1.3e-13	KH domain
KH_1	PF00013	325 - 391	2.5e-11	KH domain
KH_1	PF00013	540 - 603	6.4e-10	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51580
fragaria_vesca	FvH4_6g37150 FvH4_6g37150 FvH4_6g37150
malus_domestica	MD09G1161100.v1.1 MD17G1146900.v1.1
prunus_persica	Prupe.3G020000_v2.0.a1 Prupe.3G020000_v2.0.a1
pyrus_communis	pycom09g07950 pycom17g13960
rosa_chinensis	RchiOBHm_Chr2g0149721
rosa_laevigata	RLG00000020442
rosa_multiflora	Rmu_sc0001091.1_g000008
rosa_roxburghii	Rroxscaffold_2G00097760
rosa_rugosa	Rorug02G0415600 Rorug02G0415700 Rorug02G0415800
rosa_samantha	Rh2AG475400 Rh2BG486800 Rh2CG461000 Rh2DG496000
rosa_wichuraiana	Rw2G038740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	146
Acc36I	ACCTGC	1 cut(s)	282
AccB1I	GGYRCC	2 cut(s)	104, 1226
AccB7I	CCANNNNNTGG	3 cut(s)	1223, 1463, 1571
AccBSI	CCGCTC	1 cut(s)	847
AccIII	TCCGGA	1 cut(s)	1766
AciI	CCGC	7 cut(s)	33, 198, 410, 847, 897, 935, 1587
AclWI	GGATC	9 cut(s)	400, 433, 556, 1350, 1353, 1407, 1747, 1764, 1777
AcoI	YGGCCR	1 cut(s)	310
AcsI	RAATTY	2 cut(s)	1219, 1711
AcyI	GRCGYC	1 cut(s)	105
AfaI	GTAC	3 cut(s)	1122, 1149, 1238
AfeI	AGCGCT	1 cut(s)	538
AfiI	CCNNNNNNNGG	8 cut(s)	42, 134, 189, 260, 608, 1223, 1463, 1571
AflIII	ACRYGT	1 cut(s)	1239
AgsI	TTSAA	5 cut(s)	226, 791, 950, 1293, 1731
AhdI	GACNNNNNGTC	1 cut(s)	1378
AjnI	CCWGG	7 cut(s)	210, 312, 647, 952, 1300, 1456, 1506
AjuI	GAANNNNNNNTTGG	2 cut(s)	101, 133
AloI	GAACNNNNNNTCC	2 cut(s)	164, 196
AluBI	AGCT	6 cut(s)	24, 464, 624, 908, 1049, 1518
AluI	AGCT	6 cut(s)	24, 464, 624, 908, 1049, 1518
Alw21I	GWGCWC	1 cut(s)	26
Alw26I	GTCTC	2 cut(s)	447, 1581
AlwI	GGATC	9 cut(s)	400, 433, 556, 1350, 1353, 1407, 1747, 1764, 1777
AlwNI	CAGNNNCTG	1 cut(s)	211
Aor13HI	TCCGGA	1 cut(s)	1766
Aor51HI	AGCGCT	1 cut(s)	538
AoxI	GGCC	4 cut(s)	207, 247, 310, 375
ApaI	GGGCCC	1 cut(s)	379
ApeKI	GCWGC	7 cut(s)	46, 285, 288, 524, 827, 959, 1790
ApoI	RAATTY	2 cut(s)	1219, 1711
ArsI	GACNNNNNNTTYG	6 cut(s)	56, 88, 135, 167, 1576, 1608
AseI	ATTAAT	1 cut(s)	1032
Asp700I	GAANNNNTTC	1 cut(s)	1086
AspLEI	GCGC	3 cut(s)	107, 539, 673
AspS9I	GGNCC	7 cut(s)	112, 208, 247, 375, 376, 1423, 1466
AsuC2I	CCSGG	3 cut(s)	70, 102, 1737
AsuHPI	GGTGA	2 cut(s)	1308, 1460
AvaII	GGWCC	3 cut(s)	112, 1423, 1466
AxyI	CCTNAGG	1 cut(s)	1529
BaeGI	GKGCMC	2 cut(s)	379, 1231
BalI	TGGCCA	1 cut(s)	312
BamHI	GGATCC	1 cut(s)	1769
BanI	GGYRCC	2 cut(s)	104, 1226
BanII	GRGCYC	3 cut(s)	26, 95, 379
BbsI	GAAGAC	1 cut(s)	1236
Bbv12I	GWGCWC	1 cut(s)	26
BbvI	GCAGC	7 cut(s)	33, 272, 275, 536, 814, 946, 1777
BccI	CCATC	4 cut(s)	64, 226, 1338, 1628
BceAI	ACGGC	1 cut(s)	151
BcgI	CGANNNNNNTGC	4 cut(s)	819, 853, 1603, 1637
BciT130I	CCWGG	7 cut(s)	212, 314, 649, 954, 1302, 1458, 1508
BciVI	GTATCC	2 cut(s)	1320, 1774
BcnI	CCSGG	3 cut(s)	70, 102, 1737
BcoDI	GTCTC	2 cut(s)	447, 1581
BfaI	CTAG	4 cut(s)	534, 621, 972, 1059
BfmI	CTRYAG	3 cut(s)	289, 633, 960
BfoI	RGCGCY	2 cut(s)	108, 540
BfuAI	ACCTGC	1 cut(s)	282
BfuI	GTATCC	2 cut(s)	1320, 1774
BglI	GCCNNNNNGGC	1 cut(s)	206
BglII	AGATCT	1 cut(s)	1481
BisI	GCNGC	8 cut(s)	47, 286, 289, 525, 828, 960, 1588, 1791
BlsI	GCNGC	8 cut(s)	48, 287, 290, 526, 829, 961, 1589, 1792
Bme18I	GGWCC	3 cut(s)	112, 1423, 1466
BmeRI	GACNNNNNGTC	1 cut(s)	1378
BmgT120I	GGNCC	7 cut(s)	112, 208, 247, 375, 376, 1423, 1466
BmrI	ACTGGG	1 cut(s)	98
BmsI	GCATC	7 cut(s)	511, 814, 815, 931, 1144, 1248, 1534
BmuI	ACTGGG	1 cut(s)	98
BpiI	GAAGAC	1 cut(s)	1236
BplI	GAGNNNNNCTC	4 cut(s)	1471, 1503, 1561, 1593
BpmI	CTGGAG	1 cut(s)	1353
Bpu10I	CCTNAGC	2 cut(s)	513, 879
BpuEI	CTTGAG	1 cut(s)	1623
BpuMI	CCSGG	3 cut(s)	70, 102, 1737
BsaHI	GRCGYC	1 cut(s)	105
BsaI	GGTCTC	1 cut(s)	1581
BsaWI	WCCGGW	1 cut(s)	1766
BsaXI	ACNNNNNCTCC	2 cut(s)	330, 360
Bsc4I	CCNNNNNNNGG	8 cut(s)	42, 134, 189, 260, 608, 1223, 1463, 1571
Bse1I	ACTGG	4 cut(s)	93, 577, 1057, 1378
Bse21I	CCTNAGG	1 cut(s)	1529
BseAI	TCCGGA	1 cut(s)	1766
BseBI	CCWGG	7 cut(s)	212, 314, 649, 954, 1302, 1458, 1508
BseGI	GGATG	8 cut(s)	56, 156, 237, 244, 847, 985, 1159, 1815
BseLI	CCNNNNNNNGG	8 cut(s)	42, 134, 189, 260, 608, 1223, 1463, 1571
BseMII	CTCAG	4 cut(s)	870, 1245, 1616, 1808
BseNI	ACTGG	4 cut(s)	93, 577, 1057, 1378
BseRI	GAGGAG	2 cut(s)	351, 968
BseSI	GKGCMC	2 cut(s)	379, 1231
BseXI	GCAGC	7 cut(s)	33, 272, 275, 536, 814, 946, 1777
BseYI	CCCAGC	2 cut(s)	201, 317
BsgI	GTGCAG	3 cut(s)	567, 813, 849
BshFI	GGCC	4 cut(s)	209, 249, 312, 377
BshNI	GGYRCC	2 cut(s)	104, 1226
BsiHKAI	GWGCWC	1 cut(s)	26
BsiSI	CCGG	7 cut(s)	43, 69, 102, 426, 1469, 1737, 1767
BslFI	GGGAC	2 cut(s)	83, 1366
BslI	CCNNNNNNNGG	8 cut(s)	42, 134, 189, 260, 608, 1223, 1463, 1571
BsmAI	GTCTC	2 cut(s)	447, 1581
BsmFI	GGGAC	2 cut(s)	83, 1366
BsmI	GAATGC	2 cut(s)	149, 1643
BsnI	GGCC	4 cut(s)	209, 249, 312, 377
Bso31I	GGTCTC	1 cut(s)	1581
Bsp120I	GGGCCC	1 cut(s)	375
Bsp1286I	GDGCHC	4 cut(s)	26, 95, 379, 1231
Bsp13I	TCCGGA	1 cut(s)	1766
Bsp1407I	TGTACA	2 cut(s)	1120, 1147
Bsp19I	CCATGG	2 cut(s)	565, 1807
BspACI	CCGC	7 cut(s)	33, 198, 410, 847, 897, 935, 1587
BspANI	GGCC	4 cut(s)	209, 249, 312, 377
BspCNI	CTCAG	4 cut(s)	871, 1246, 1615, 1807
BspEI	TCCGGA	1 cut(s)	1766
BspHI	TCATGA	3 cut(s)	1629, 1647, 1723
BspMAI	CTGCAG	2 cut(s)	293, 964
BspMI	ACCTGC	1 cut(s)	282
BspPI	GGATC	9 cut(s)	400, 433, 556, 1350, 1353, 1407, 1747, 1764, 1777
BspQI	GCTCTTC	1 cut(s)	56
BspT107I	GGYRCC	2 cut(s)	104, 1226
BspTNI	GGTCTC	1 cut(s)	1581
BsrBI	CCGCTC	1 cut(s)	847
BsrGI	TGTACA	2 cut(s)	1120, 1147
BsrI	ACTGG	4 cut(s)	93, 577, 1057, 1378
BssNI	GRCGYC	1 cut(s)	105
BssT1I	CCWWGG	4 cut(s)	108, 565, 1565, 1807
Bst2UI	CCWGG	7 cut(s)	212, 314, 649, 954, 1302, 1458, 1508
Bst4CI	ACNGT	6 cut(s)	263, 269, 371, 1236, 1406, 1676
Bst6I	CTCTTC	2 cut(s)	56, 664
BstACI	GRCGYC	1 cut(s)	105
BstAUI	TGTACA	2 cut(s)	1120, 1147
BstC8I	GCNNGC	4 cut(s)	198, 207, 582, 1047
BstDEI	CTNAG	6 cut(s)	513, 879, 1254, 1529, 1602, 1794
BstDSI	CCRYGG	3 cut(s)	133, 565, 1807
BstF5I	GGATG	8 cut(s)	56, 156, 237, 244, 847, 985, 1159, 1815
BstH2I	RGCGCY	2 cut(s)	108, 540
BstHHI	GCGC	3 cut(s)	107, 539, 673
BstMAI	GTCTC	2 cut(s)	447, 1581
BstMWI	GCNNNNNNNGC	7 cut(s)	90, 144, 202, 206, 905, 968, 1055
BstNI	CCWGG	7 cut(s)	212, 314, 649, 954, 1302, 1458, 1508
BstNSI	RCATGY	2 cut(s)	1243, 1790
BstSFI	CTRYAG	3 cut(s)	289, 633, 960
BstSLI	GKGCMC	2 cut(s)	379, 1231
BstV1I	GCAGC	7 cut(s)	33, 272, 275, 536, 814, 946, 1777
BstV2I	GAAGAC	1 cut(s)	1236
BstX2I	RGATCY	4 cut(s)	405, 1481, 1739, 1769
BstXI	CCANNNNNNTGG	2 cut(s)	572, 1497
BstYI	RGATCY	4 cut(s)	405, 1481, 1739, 1769
Bsu36I	CCTNAGG	1 cut(s)	1529
BsuI	GTATCC	2 cut(s)	1320, 1774
BsuRI	GGCC	4 cut(s)	209, 249, 312, 377
BtgI	CCRYGG	3 cut(s)	133, 565, 1807
BtsCI	GGATG	8 cut(s)	56, 156, 237, 244, 847, 985, 1159, 1815
BtsIMutI	CAGTG	3 cut(s)	74, 376, 1411
BveI	ACCTGC	1 cut(s)	282
Cac8I	GCNNGC	4 cut(s)	198, 207, 582, 1047
CaiI	CAGNNNCTG	1 cut(s)	211
CciI	TCATGA	3 cut(s)	1629, 1647, 1723
CfoI	GCGC	3 cut(s)	107, 539, 673
Cfr13I	GGNCC	7 cut(s)	112, 208, 247, 375, 376, 1423, 1466
CseI	GACGC	2 cut(s)	136, 1442
CsiI	ACCWGGT	1 cut(s)	952
Csp6I	GTAC	3 cut(s)	1121, 1148, 1237
CviQI	GTAC	3 cut(s)	1121, 1148, 1237
DdeI	CTNAG	6 cut(s)	513, 879, 1254, 1529, 1602, 1794
DinI	GGCGCC	1 cut(s)	106
DrdI	GACNNNNNNGTC	1 cut(s)	146
DriI	GACNNNNNGTC	1 cut(s)	1378
DseDI	GACNNNNNNGTC	1 cut(s)	146
EaeI	YGGCCR	1 cut(s)	310
Eam1104I	CTCTTC	2 cut(s)	56, 664
Eam1105I	GACNNNNNGTC	1 cut(s)	1378
EarI	CTCTTC	2 cut(s)	56, 664
Ecl136II	GAGCTC	1 cut(s)	24
Eco130I	CCWWGG	4 cut(s)	108, 565, 1565, 1807
Eco24I	GRGCYC	3 cut(s)	26, 95, 379
Eco31I	GGTCTC	1 cut(s)	1581
Eco32I	GATATC	1 cut(s)	1701
Eco47I	GGWCC	3 cut(s)	112, 1423, 1466
Eco47III	AGCGCT	1 cut(s)	538
Eco53kI	GAGCTC	1 cut(s)	24
Eco81I	CCTNAGG	1 cut(s)	1529
EcoICRI	GAGCTC	1 cut(s)	24
EcoO109I	RGGNCCY	2 cut(s)	208, 375
EcoRII	CCWGG	7 cut(s)	210, 312, 647, 952, 1300, 1456, 1506
EcoRV	GATATC	1 cut(s)	1701
EcoT14I	CCWWGG	4 cut(s)	108, 565, 1565, 1807
EcoT38I	GRGCYC	3 cut(s)	26, 95, 379
EgeI	GGCGCC	1 cut(s)	106
EheI	GGCGCC	1 cut(s)	106
ErhI	CCWWGG	4 cut(s)	108, 565, 1565, 1807
FaqI	GGGAC	2 cut(s)	83, 1366
FauI	CCCGC	4 cut(s)	205, 417, 840, 904
Fnu4HI	GCNGC	8 cut(s)	47, 286, 289, 525, 828, 960, 1588, 1791
FokI	GGATG	8 cut(s)	43, 143, 244, 251, 854, 972, 1166, 1802
FriOI	GRGCYC	3 cut(s)	26, 95, 379
Fsp4HI	GCNGC	8 cut(s)	47, 286, 289, 525, 828, 960, 1588, 1791
FspBI	CTAG	4 cut(s)	534, 621, 972, 1059
GlaI	GCGC	3 cut(s)	106, 538, 672
GluI	GCNGC	8 cut(s)	47, 286, 289, 525, 828, 960, 1588, 1791
GsaI	CCCAGC	2 cut(s)	205, 321
GsuI	CTGGAG	1 cut(s)	1353
HaeII	RGCGCY	2 cut(s)	108, 540
HaeIII	GGCC	4 cut(s)	209, 249, 312, 377
HapII	CCGG	7 cut(s)	43, 69, 102, 426, 1469, 1737, 1767
HgaI	GACGC	2 cut(s)	136, 1442
HhaI	GCGC	3 cut(s)	107, 539, 673
Hin1I	GRCGYC	1 cut(s)	105
Hin6I	GCGC	3 cut(s)	105, 537, 671
HinP1I	GCGC	3 cut(s)	105, 537, 671
HincII	GTYRAC	4 cut(s)	592, 689, 1595, 1608
HindII	GTYRAC	4 cut(s)	592, 689, 1595, 1608
HpaI	GTTAAC	1 cut(s)	1608
HpaII	CCGG	7 cut(s)	43, 69, 102, 426, 1469, 1737, 1767
HphI	GGTGA	2 cut(s)	1308, 1460
Hpy166II	GTNNAC	5 cut(s)	592, 689, 1500, 1595, 1608
Hpy188I	TCNGA	8 cut(s)	405, 756, 841, 1092, 1683, 1689, 1797, 1830
Hpy8I	GTNNAC	5 cut(s)	592, 689, 1500, 1595, 1608
Hpy99I	CGWCG	3 cut(s)	143, 152, 155
HpyAV	CCTTC	3 cut(s)	337, 509, 1323
HpyCH4III	ACNGT	6 cut(s)	263, 269, 371, 1236, 1406, 1676
HpyCH4IV	ACGT	2 cut(s)	1116, 1656
HpyF10VI	GCNNNNNNNGC	7 cut(s)	90, 144, 202, 206, 905, 968, 1055
HpyF3I	CTNAG	6 cut(s)	513, 879, 1254, 1529, 1602, 1794
HpySE526I	ACGT	2 cut(s)	1116, 1656
Hsp92I	GRCGYC	1 cut(s)	105
HspAI	GCGC	3 cut(s)	105, 537, 671
KasI	GGCGCC	1 cut(s)	104
Kpn2I	TCCGGA	1 cut(s)	1766
KspAI	GTTAAC	1 cut(s)	1608
LguI	GCTCTTC	1 cut(s)	56
LmnI	GCTCC	5 cut(s)	29, 98, 776, 981, 1567
Lsp1109I	GCAGC	7 cut(s)	33, 272, 275, 536, 814, 946, 1777
LweI	GCATC	7 cut(s)	511, 814, 815, 931, 1144, 1248, 1534
MabI	ACCWGGT	1 cut(s)	952
MaeI	CTAG	4 cut(s)	534, 621, 972, 1059
MaeII	ACGT	2 cut(s)	1116, 1656
MaeIII	GTNAC	4 cut(s)	72, 263, 269, 653
MbiI	CCGCTC	1 cut(s)	847
MboII	GAAGA	8 cut(s)	43, 367, 481, 651, 716, 719, 1236, 1476
MflI	RGATCY	4 cut(s)	405, 1481, 1739, 1769
MhlI	GDGCHC	4 cut(s)	26, 95, 379, 1231
MlsI	TGGCCA	1 cut(s)	312
MluNI	TGGCCA	1 cut(s)	312
Mly113I	GGCGCC	1 cut(s)	105
MlyI	GAGTC	4 cut(s)	396, 587, 1495, 1645
MmeI	TCCRAC	1 cut(s)	1303
Mox20I	TGGCCA	1 cut(s)	312
MroI	TCCGGA	1 cut(s)	1766
MroXI	GAANNNNTTC	1 cut(s)	1086
MscI	TGGCCA	1 cut(s)	312
MseI	TTAA	4 cut(s)	627, 720, 1032, 1607
MslI	CAYNNNNRTG	2 cut(s)	1110, 1659
Msp20I	TGGCCA	1 cut(s)	312
MspA1I	CMGCKG	1 cut(s)	464
MspI	CCGG	7 cut(s)	43, 69, 102, 426, 1469, 1737, 1767
Mva1269I	GAATGC	2 cut(s)	149, 1643
MvaI	CCWGG	7 cut(s)	212, 314, 649, 954, 1302, 1458, 1508
MwoI	GCNNNNNNNGC	7 cut(s)	90, 144, 202, 206, 905, 968, 1055
NarI	GGCGCC	1 cut(s)	105
NciI	CCSGG	3 cut(s)	70, 102, 1737
NcoI	CCATGG	2 cut(s)	565, 1807
NmuCI	GTSAC	1 cut(s)	72
NspI	RCATGY	2 cut(s)	1243, 1790
PagI	TCATGA	3 cut(s)	1629, 1647, 1723
PasI	CCCWGGG	1 cut(s)	1507
PciI	ACATGT	1 cut(s)	1239
PciSI	GCTCTTC	1 cut(s)	56
PcsI	WCGNNNNNNNCGW	2 cut(s)	147, 557
PctI	GAATGC	2 cut(s)	149, 1643
PdmI	GAANNNNTTC	1 cut(s)	1086
PfeI	GAWTC	8 cut(s)	836, 874, 1180, 1326, 1633, 1684, 1690, 1727
PflFI	GACNNNGTC	1 cut(s)	1464
PflMI	CCANNNNNTGG	3 cut(s)	1223, 1463, 1571
PfoI	TCCNGGA	2 cut(s)	647, 1456
PkrI	GCNGC	8 cut(s)	48, 287, 290, 526, 829, 961, 1589, 1792
PleI	GAGTC	4 cut(s)	395, 587, 1495, 1645
PluTI	GGCGCC	1 cut(s)	108
PpsI	GAGTC	4 cut(s)	395, 587, 1495, 1645
PscI	ACATGT	1 cut(s)	1239
PshBI	ATTAAT	1 cut(s)	1032
Psp124BI	GAGCTC	1 cut(s)	26
Psp6I	CCWGG	7 cut(s)	210, 312, 647, 952, 1300, 1456, 1506
PspFI	CCCAGC	2 cut(s)	201, 317
PspGI	CCWGG	7 cut(s)	210, 312, 647, 952, 1300, 1456, 1506
PspOMI	GGGCCC	1 cut(s)	375
PspPI	GGNCC	7 cut(s)	112, 208, 247, 375, 376, 1423, 1466
PstI	CTGCAG	2 cut(s)	293, 964
PstNI	CAGNNNCTG	1 cut(s)	211
PsuI	RGATCY	4 cut(s)	405, 1481, 1739, 1769
PsyI	GACNNNGTC	1 cut(s)	1464
PvuII	CAGCTG	1 cut(s)	464
RsaI	GTAC	3 cut(s)	1122, 1149, 1238
RsaNI	GTAC	3 cut(s)	1121, 1148, 1237
RseI	CAYNNNNRTG	2 cut(s)	1110, 1659
SacI	GAGCTC	1 cut(s)	26
SapI	GCTCTTC	1 cut(s)	56
SaqAI	TTAA	4 cut(s)	627, 720, 1032, 1607
SatI	GCNGC	8 cut(s)	47, 286, 289, 525, 828, 960, 1588, 1791
Sau96I	GGNCC	7 cut(s)	112, 208, 247, 375, 376, 1423, 1466
SchI	GAGTC	4 cut(s)	396, 587, 1495, 1645
SduI	GDGCHC	4 cut(s)	26, 95, 379, 1231
SexAI	ACCWGGT	1 cut(s)	952
SfaNI	GCATC	7 cut(s)	511, 814, 815, 931, 1144, 1248, 1534
SfcI	CTRYAG	3 cut(s)	289, 633, 960
SfoI	GGCGCC	1 cut(s)	106
SinI	GGWCC	3 cut(s)	112, 1423, 1466
SmiMI	CAYNNNNRTG	2 cut(s)	1110, 1659
SmlI	CTYRAG	1 cut(s)	1638
SmoI	CTYRAG	1 cut(s)	1638
SsiI	CCGC	7 cut(s)	33, 198, 410, 847, 897, 935, 1587
SspDI	GGCGCC	1 cut(s)	104
SspMI	CTAG	4 cut(s)	534, 621, 972, 1059
SstI	GAGCTC	1 cut(s)	26
StyI	CCWWGG	4 cut(s)	108, 565, 1565, 1807
TaaI	ACNGT	6 cut(s)	263, 269, 371, 1236, 1406, 1676
TaiI	ACGT	2 cut(s)	1119, 1659
TaqI	TCGA	6 cut(s)	62, 120, 560, 928, 1357, 1623
TaqII	GACCGA	2 cut(s)	1294, 1440
TatI	WGTACW	2 cut(s)	1120, 1147
TauI	GCSGC	1 cut(s)	1590
TfiI	GAWTC	8 cut(s)	836, 874, 1180, 1326, 1633, 1684, 1690, 1727
Tru1I	TTAA	4 cut(s)	627, 720, 1032, 1607
Tru9I	TTAA	4 cut(s)	627, 720, 1032, 1607
TscAI	CASTG	3 cut(s)	81, 376, 1411
TseFI	GTSAC	1 cut(s)	72
TseI	GCWGC	7 cut(s)	46, 285, 288, 524, 827, 959, 1790
Tsp45I	GTSAC	1 cut(s)	72
TspDTI	ATGAA	9 cut(s)	255, 1015, 1050, 1154, 1217, 1236, 1636, 1712, 1804
TspGWI	ACGGA	2 cut(s)	85, 1422
TspRI	CASTG	3 cut(s)	81, 376, 1411
Tth111I	GACNNNGTC	1 cut(s)	1464
Van91I	CCANNNNNTGG	3 cut(s)	1223, 1463, 1571
VpaK11BI	GGWCC	3 cut(s)	112, 1423, 1466
VspI	ATTAAT	1 cut(s)	1032
XapI	RAATTY	2 cut(s)	1219, 1711
XceI	RCATGY	2 cut(s)	1243, 1790
XmnI	GAANNNNTTC	1 cut(s)	1086
XspI	CTAG	4 cut(s)	534, 621, 972, 1059

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.