No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g22580 |
| pyrus_communis | pycom10g10050 |
| rosa_chinensis | RchiOBHm_Chr1g0360291 RchiOBHm_Chr4g0392001 |
| rosa_laevigata | RLG00000019293 |
| rosa_multiflora | Rmu_sc0003548.1_g000002 Rmu_sc0005230.1_g000016 Rmu_sc0010382.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00027230 Rroxscaffold_2G00132030 Rroxscaffold_7G00188300 Rroxscaffold_7G00194990 |
| rosa_samantha | Rh2AG435600 Rh2CG421700 Rh4AG122200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 82 |
| AfaI | GTAC | 1 cut(s) | 239 |
| AgsI | TTSAA | 3 cut(s) | 163, 181, 251 |
| AjnI | CCWGG | 1 cut(s) | 48 |
| AoxI | GGCC | 1 cut(s) | 75 |
| ApeKI | GCWGC | 1 cut(s) | 200 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 147 |
| BbsI | GAAGAC | 1 cut(s) | 223 |
| BbvI | GCAGC | 1 cut(s) | 187 |
| BciT130I | CCWGG | 1 cut(s) | 50 |
| BfmI | CTRYAG | 1 cut(s) | 15 |
| BisI | GCNGC | 1 cut(s) | 201 |
| BlsI | GCNGC | 1 cut(s) | 202 |
| Bme1390I | CCNGG | 1 cut(s) | 50 |
| BmrFI | CCNGG | 1 cut(s) | 50 |
| BpiI | GAAGAC | 1 cut(s) | 223 |
| BsaJI | CCNNGG | 1 cut(s) | 49 |
| BseBI | CCWGG | 1 cut(s) | 50 |
| BseDI | CCNNGG | 1 cut(s) | 49 |
| BseRI | GAGGAG | 1 cut(s) | 197 |
| BseXI | GCAGC | 1 cut(s) | 187 |
| BsgI | GTGCAG | 1 cut(s) | 186 |
| BshFI | GGCC | 1 cut(s) | 77 |
| BsnI | GGCC | 1 cut(s) | 77 |
| BspACI | CCGC | 1 cut(s) | 82 |
| BspANI | GGCC | 1 cut(s) | 77 |
| BspHI | TCATGA | 1 cut(s) | 254 |
| BssECI | CCNNGG | 1 cut(s) | 49 |
| Bst2UI | CCWGG | 1 cut(s) | 50 |
| BstNI | CCWGG | 1 cut(s) | 50 |
| BstSCI | CCNGG | 1 cut(s) | 48 |
| BstSFI | CTRYAG | 1 cut(s) | 15 |
| BstV1I | GCAGC | 1 cut(s) | 187 |
| BstV2I | GAAGAC | 1 cut(s) | 223 |
| BsuRI | GGCC | 1 cut(s) | 77 |
| CciI | TCATGA | 1 cut(s) | 254 |
| Csp6I | GTAC | 1 cut(s) | 238 |
| CviAII | CATG | 1 cut(s) | 255 |
| CviJI | RGCY | 2 cut(s) | 10, 77 |
| CviKI_1 | RGCY | 2 cut(s) | 10, 77 |
| CviQI | GTAC | 1 cut(s) | 238 |
| EcoRII | CCWGG | 1 cut(s) | 48 |
| FaeI | CATG | 1 cut(s) | 258 |
| FaiI | YATR | 2 cut(s) | 17, 256 |
| FatI | CATG | 1 cut(s) | 254 |
| Fnu4HI | GCNGC | 1 cut(s) | 201 |
| Fsp4HI | GCNGC | 1 cut(s) | 201 |
| GluI | GCNGC | 1 cut(s) | 201 |
| HaeIII | GGCC | 1 cut(s) | 77 |
| Hin1II | CATG | 1 cut(s) | 258 |
| HinfI | GANTC | 1 cut(s) | 251 |
| Hpy166II | GTNNAC | 1 cut(s) | 34 |
| Hpy188III | TCNNGA | 2 cut(s) | 152, 255 |
| Hpy8I | GTNNAC | 1 cut(s) | 34 |
| HpyAV | CCTTC | 1 cut(s) | 158 |
| HpyCH4IV | ACGT | 1 cut(s) | 139 |
| HpyCH4V | TGCA | 3 cut(s) | 26, 58, 203 |
| HpySE526I | ACGT | 1 cut(s) | 139 |
| Hsp92II | CATG | 1 cut(s) | 258 |
| LmnI | GCTCC | 1 cut(s) | 111 |
| LpnPI | CCDG | 5 cut(s) | 14, 35, 62, 137, 157 |
| Lsp1109I | GCAGC | 1 cut(s) | 187 |
| MaeII | ACGT | 1 cut(s) | 139 |
| MboII | GAAGA | 2 cut(s) | 167, 228 |
| MluCI | AATT | 2 cut(s) | 166, 183 |
| MnlI | CCTC | 4 cut(s) | 35, 67, 96, 218 |
| MroXI | GAANNNNTTC | 1 cut(s) | 147 |
| MseI | TTAA | 2 cut(s) | 95, 186 |
| MspR9I | CCNGG | 1 cut(s) | 50 |
| MvaI | CCWGG | 1 cut(s) | 50 |
| NlaIII | CATG | 1 cut(s) | 258 |
| PagI | TCATGA | 1 cut(s) | 254 |
| PdmI | GAANNNNTTC | 1 cut(s) | 147 |
| PfeI | GAWTC | 1 cut(s) | 251 |
| PflFI | GACNNNGTC | 1 cut(s) | 222 |
| PkrI | GCNGC | 1 cut(s) | 202 |
| Psp6I | CCWGG | 1 cut(s) | 48 |
| PspGI | CCWGG | 1 cut(s) | 48 |
| PsyI | GACNNNGTC | 1 cut(s) | 222 |
| RsaI | GTAC | 1 cut(s) | 239 |
| RsaNI | GTAC | 1 cut(s) | 238 |
| SaqAI | TTAA | 2 cut(s) | 95, 186 |
| SatI | GCNGC | 1 cut(s) | 201 |
| ScrFI | CCNGG | 1 cut(s) | 50 |
| SetI | ASST | 4 cut(s) | 33, 101, 142, 150 |
| SfcI | CTRYAG | 1 cut(s) | 15 |
| SgeI | CNNG | 9 cut(s) | 41, 61, 62, 79, 91, 152, 164, 184, 202 |
| Sse9I | AATT | 2 cut(s) | 166, 183 |
| SsiI | CCGC | 1 cut(s) | 82 |
| StyD4I | CCNGG | 1 cut(s) | 48 |
| TaiI | ACGT | 1 cut(s) | 142 |
| TasI | AATT | 2 cut(s) | 166, 183 |
| TfiI | GAWTC | 1 cut(s) | 251 |
| Tru1I | TTAA | 2 cut(s) | 95, 186 |
| Tru9I | TTAA | 2 cut(s) | 95, 186 |
| TseI | GCWGC | 1 cut(s) | 200 |
| Tth111I | GACNNNGTC | 1 cut(s) | 222 |
| XmnI | GAANNNNTTC | 1 cut(s) | 147 |