Rh3CG070100

F-actin-capping proteins bind in a Ca(2 )-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0008545
Physical Location & Seq
Forward (+)
4821834 .. 4825338
3505 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG070100.1

Sequence Viewer

Length: 915 bp
ATGGCGGACGAAGAAGAATCAGAGCTAAGCGAGAAGCAGAAGATTGATATAGCCAAGTGGTTCCTCCTCAACTCTCCTCCCGGTGAAATCCAATTCGTCGCCGAAGATGTGAAGGCGGTAGTCAACGACGACGTTTTGTACGAAGAAGCAGCCTCAGTGGCTTTTCCGCTGTATAACAAATCACACATGATTTCGCTGGAAATGCCTGGCGGAATTGGAGATGTTCTAGTTACATCTTTCGGAGAGCTCCGTGGGAATGAGTACCTTGATCCCAGGACTGCTCATGTTGCTGTAGTTGACCATATCAAACAGGTTTGTCCAGACGTGAGACCTGCATTGGATGAGGAACTTCCTTCCGCATATGTTGAGGAATTCAGGTGTGCTTTGGATGGAGAAATACTTAGATATGTGGGTGAAGCTTATCCAAAAGGAGTCTGCTCAGTGTACTGTGGGAATGGTAAAGATGCAGAGGGCCCAGGATCTGACTTTGAGCTCGTGGTAGTGATTTCAGCTGCTAGACATAGCCCACAAAATTTCTGCAATGGTAGTTGGCGTTCAGTGTGGAATATTGAGTTCAAAGATGAAGTACAAGTGCTGGAATTAAAAGGCAAACTGCAGGTGGGTGCCCACTATTTTGAGGAGGGGAATGTGCAGTTAGATGCAAAACATGAATGCAAAGATTCAACAATTTTTCAGTCCTCTGAAGATTCTGCAATTACCATAGGCAACATTATAAGGCAACACGAGGCAGAATACTTGGCATCTCTTGAGGCATCCTATTCAAACTTGCCCGATACCACTTTTAAGGATCTTCGTAGAAAGCTTCCAGTTACTCGCACCCTATTTCCATGGCAGAATACTTTACAGTTTAGCTTGACAAGAGATATCACAAAAGAACTTGGCATTGGAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
F-actin_cap_A

Protein Analysis

304

Amino Acids

33.95

Weight (kDa)

4.68

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-actin_cap_A PF01267 18 - 295 3e-77 F-actin capping protein alpha subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 734
AarI CACCTGC 1 cut(s) 607
Acc36I ACCTGC 2 cut(s) 340, 607
AccB1I GGYRCC 1 cut(s) 623
AciI CCGC 5 cut(s) 5, 116, 167, 210, 357
AclWI GGATC 3 cut(s) 263, 487, 816
AcsI RAATTY 2 cut(s) 371, 532
AcuI CTGAAG 1 cut(s) 723
AfaI GTAC 4 cut(s) 140, 263, 446, 588
AgsI TTSAA 3 cut(s) 577, 684, 783
AjiI CACGTC 1 cut(s) 325
AjnI CCWGG 3 cut(s) 205, 272, 475
AjuI GAANNNNNNNTTGG 1 cut(s) 888
AluBI AGCT 7 cut(s) 25, 247, 419, 493, 512, 823, 873
AluI AGCT 7 cut(s) 25, 247, 419, 493, 512, 823, 873
Alw21I GWGCWC 2 cut(s) 249, 495
Alw26I GTCTC 1 cut(s) 322
AlwI GGATC 3 cut(s) 263, 487, 816
AlwNI CAGNNNCTG 1 cut(s) 482
AoxI GGCC 1 cut(s) 472
ApaI GGGCCC 1 cut(s) 476
ApeKI GCWGC 2 cut(s) 149, 512
ApoI RAATTY 2 cut(s) 371, 532
AspS9I GGNCC 2 cut(s) 472, 473
AsuC2I CCSGG 1 cut(s) 81
AsuHPI GGTGA 2 cut(s) 95, 425
BaeGI GKGCMC 2 cut(s) 476, 628
BanI GGYRCC 1 cut(s) 623
BanII GRGCYC 3 cut(s) 249, 476, 495
BauI CACGAG 2 cut(s) 494, 743
Bbv12I GWGCWC 2 cut(s) 249, 495
BbvI GCAGC 2 cut(s) 161, 499
BccI CCATC 1 cut(s) 383
BciT130I CCWGG 3 cut(s) 207, 274, 477
BcnI CCSGG 1 cut(s) 81
BcoDI GTCTC 1 cut(s) 322
BfaI CTAG 2 cut(s) 227, 516
BfmI CTRYAG 2 cut(s) 291, 614
BfuAI ACCTGC 2 cut(s) 340, 607
BglI GCCNNNNNGGC 1 cut(s) 158
BisI GCNGC 2 cut(s) 150, 513
BlpI GCTNAGC 1 cut(s) 26
BlsI GCNGC 2 cut(s) 151, 514
Bme1390I CCNGG 4 cut(s) 81, 207, 274, 477
BmgBI CACGTC 1 cut(s) 325
BmgT120I GGNCC 2 cut(s) 472, 473
BmiI GGNNCC 3 cut(s) 62, 474, 625
BmrFI CCNGG 4 cut(s) 81, 207, 274, 477
BmsI GCATC 4 cut(s) 454, 649, 770, 782
Bpu1102I GCTNAGC 1 cut(s) 26
BpuEI CTTGAG 1 cut(s) 788
BpuMI CCSGG 1 cut(s) 81
BsaI GGTCTC 1 cut(s) 322
BsaJI CCNNGG 4 cut(s) 250, 272, 475, 848
Bse1I ACTGG 1 cut(s) 827
Bse3DI GCAATG 1 cut(s) 547
BseBI CCWGG 3 cut(s) 207, 274, 477
BseDI CCNNGG 4 cut(s) 250, 272, 475, 848
BseGI GGATG 3 cut(s) 346, 394, 773
BseMI GCAATG 1 cut(s) 547
BseMII CTCAG 2 cut(s) 168, 453
BseNI ACTGG 1 cut(s) 827
BseRI GAGGAG 3 cut(s) 56, 66, 653
BseSI GKGCMC 2 cut(s) 476, 628
BseXI GCAGC 2 cut(s) 161, 499
BsgI GTGCAG 1 cut(s) 671
BshFI GGCC 1 cut(s) 474
BshNI GGYRCC 1 cut(s) 623
BsiHKAI GWGCWC 2 cut(s) 249, 495
BsiSI CCGG 1 cut(s) 81
BsmAI GTCTC 1 cut(s) 322
BsmI GAATGC 1 cut(s) 677
BsnI GGCC 1 cut(s) 474
Bso31I GGTCTC 1 cut(s) 322
Bsp120I GGGCCC 1 cut(s) 472
Bsp1286I GDGCHC 4 cut(s) 249, 476, 495, 628
Bsp143I GATC 3 cut(s) 268, 479, 808
Bsp1720I GCTNAGC 1 cut(s) 26
Bsp19I CCATGG 1 cut(s) 848
BspACI CCGC 5 cut(s) 5, 116, 167, 210, 357
BspANI GGCC 1 cut(s) 474
BspCNI CTCAG 2 cut(s) 167, 452
BspLI GGNNCC 3 cut(s) 62, 474, 625
BspMAI CTGCAG 1 cut(s) 618
BspMI ACCTGC 2 cut(s) 340, 607
BspPI GGATC 3 cut(s) 263, 487, 816
BspT107I GGYRCC 1 cut(s) 623
BspTNI GGTCTC 1 cut(s) 322
BsrDI GCAATG 1 cut(s) 547
BsrI ACTGG 1 cut(s) 827
BssECI CCNNGG 4 cut(s) 250, 272, 475, 848
BssMI GATC 3 cut(s) 268, 479, 808
BssSI CACGAG 2 cut(s) 494, 743
BssT1I CCWWGG 1 cut(s) 848
Bst2BI CACGAG 2 cut(s) 494, 743
Bst2UI CCWGG 3 cut(s) 207, 274, 477
Bst4CI ACNGT 2 cut(s) 449, 867
BstDEI CTNAG 4 cut(s) 26, 154, 401, 439
BstDSI CCRYGG 2 cut(s) 250, 848
BstF5I GGATG 3 cut(s) 346, 394, 773
BstKTI GATC 3 cut(s) 271, 482, 811
BstMAI GTCTC 1 cut(s) 322
BstMBI GATC 3 cut(s) 268, 479, 808
BstMWI GCNNNNNNNGC 3 cut(s) 158, 202, 287
BstNI CCWGG 3 cut(s) 207, 274, 477
BstSCI CCNGG 4 cut(s) 79, 205, 272, 475
BstSFI CTRYAG 2 cut(s) 291, 614
BstSLI GKGCMC 2 cut(s) 476, 628
BstV1I GCAGC 2 cut(s) 161, 499
BstX2I RGATCY 2 cut(s) 479, 808
BstYI RGATCY 2 cut(s) 479, 808
BsuRI GGCC 1 cut(s) 474
BtgI CCRYGG 2 cut(s) 250, 848
BtrI CACGTC 1 cut(s) 325
BtsCI GGATG 3 cut(s) 346, 394, 773
BtsIMutI CAGTG 3 cut(s) 162, 447, 564
BveI ACCTGC 2 cut(s) 340, 607
CaiI CAGNNNCTG 1 cut(s) 482
Cfr13I GGNCC 2 cut(s) 472, 473
Csp6I GTAC 4 cut(s) 139, 262, 445, 587
CviAII CATG 4 cut(s) 187, 284, 668, 849
CviQI GTAC 4 cut(s) 139, 262, 445, 587
DdeI CTNAG 4 cut(s) 26, 154, 401, 439
DpnI GATC 3 cut(s) 270, 481, 810
DpnII GATC 3 cut(s) 268, 479, 808
EciI GGCGGA 2 cut(s) 20, 225
Ecl136II GAGCTC 2 cut(s) 247, 493
Eco130I CCWWGG 1 cut(s) 848
Eco24I GRGCYC 3 cut(s) 249, 476, 495
Eco31I GGTCTC 1 cut(s) 322
Eco32I GATATC 1 cut(s) 886
Eco53kI GAGCTC 2 cut(s) 247, 493
Eco57I CTGAAG 1 cut(s) 723
EcoICRI GAGCTC 2 cut(s) 247, 493
EcoO109I RGGNCCY 1 cut(s) 472
EcoRI GAATTC 1 cut(s) 371
EcoRII CCWGG 3 cut(s) 205, 272, 475
EcoRV GATATC 1 cut(s) 886
EcoT14I CCWWGG 1 cut(s) 848
EcoT38I GRGCYC 3 cut(s) 249, 476, 495
ErhI CCWWGG 1 cut(s) 848
FaeI CATG 4 cut(s) 190, 287, 671, 852
FatI CATG 4 cut(s) 186, 283, 667, 848
FauNDI CATATG 1 cut(s) 361
Fnu4HI GCNGC 2 cut(s) 150, 513
FokI GGATG 3 cut(s) 353, 401, 760
FriOI GRGCYC 3 cut(s) 249, 476, 495
Fsp4HI GCNGC 2 cut(s) 150, 513
FspBI CTAG 2 cut(s) 227, 516
GluI GCNGC 2 cut(s) 150, 513
HaeIII GGCC 1 cut(s) 474
HapII CCGG 1 cut(s) 81
Hin1II CATG 4 cut(s) 190, 287, 671, 852
HincII GTYRAC 2 cut(s) 124, 298
HindII GTYRAC 2 cut(s) 124, 298
HindIII AAGCTT 2 cut(s) 417, 821
HinfI GANTC 4 cut(s) 17, 432, 680, 707
HpaII CCGG 1 cut(s) 81
HphI GGTGA 2 cut(s) 95, 425
Hpy166II GTNNAC 3 cut(s) 124, 298, 445
Hpy188I TCNGA 4 cut(s) 22, 242, 484, 703
Hpy188III TCNNGA 2 cut(s) 320, 767
Hpy8I GTNNAC 3 cut(s) 124, 298, 445
Hpy99I CGWCG 3 cut(s) 101, 131, 134
HpyAV CCTTC 2 cut(s) 106, 363
HpyCH4III ACNGT 2 cut(s) 449, 867
HpyCH4IV ACGT 2 cut(s) 132, 324
HpyCH4V TGCA 8 cut(s) 335, 467, 540, 616, 652, 662, 675, 713
HpyF10VI GCNNNNNNNGC 3 cut(s) 158, 202, 287
HpyF3I CTNAG 4 cut(s) 26, 154, 401, 439
HpySE526I ACGT 2 cut(s) 132, 324
Hsp92II CATG 4 cut(s) 190, 287, 671, 852
Kzo9I GATC 3 cut(s) 268, 479, 808
LmnI GCTCC 1 cut(s) 252
Lsp1109I GCAGC 2 cut(s) 161, 499
LweI GCATC 4 cut(s) 454, 649, 770, 782
MaeI CTAG 2 cut(s) 227, 516
MaeII ACGT 2 cut(s) 132, 324
MaeIII GTNAC 2 cut(s) 229, 829
MalI GATC 3 cut(s) 270, 481, 810
MboI GATC 3 cut(s) 268, 479, 808
MboII GAAGA 7 cut(s) 23, 26, 52, 116, 155, 716, 803
MflI RGATCY 2 cut(s) 479, 808
MhlI GDGCHC 4 cut(s) 249, 476, 495, 628
MluCI AATT 7 cut(s) 92, 213, 371, 532, 599, 687, 714
MlyI GAGTC 1 cut(s) 441
MseI TTAA 2 cut(s) 602, 804
MspA1I CMGCKG 2 cut(s) 169, 512
MspI CCGG 1 cut(s) 81
MspR9I CCNGG 4 cut(s) 81, 207, 274, 477
Mva1269I GAATGC 1 cut(s) 677
MvaI CCWGG 3 cut(s) 207, 274, 477
MwoI GCNNNNNNNGC 3 cut(s) 158, 202, 287
NciI CCSGG 1 cut(s) 81
NcoI CCATGG 1 cut(s) 848
NdeI CATATG 1 cut(s) 361
NdeII GATC 3 cut(s) 268, 479, 808
NlaIII CATG 4 cut(s) 190, 287, 671, 852
NlaIV GGNNCC 3 cut(s) 62, 474, 625
PaqCI CACCTGC 1 cut(s) 607
PcsI WCGNNNNNNNCGW 1 cut(s) 138
PctI GAATGC 1 cut(s) 677
PfeI GAWTC 3 cut(s) 17, 680, 707
PkrI GCNGC 2 cut(s) 151, 514
PleI GAGTC 1 cut(s) 440
PpsI GAGTC 1 cut(s) 440
PsiI TTATAA 1 cut(s) 734
Psp124BI GAGCTC 2 cut(s) 249, 495
Psp6I CCWGG 3 cut(s) 205, 272, 475
PspGI CCWGG 3 cut(s) 205, 272, 475
PspN4I GGNNCC 3 cut(s) 62, 474, 625
PspOMI GGGCCC 1 cut(s) 472
PspPI GGNCC 2 cut(s) 472, 473
PsrI GAACNNNNNNTAC 2 cut(s) 538, 570
PstI CTGCAG 1 cut(s) 618
PstNI CAGNNNCTG 1 cut(s) 482
PsuI RGATCY 2 cut(s) 479, 808
PvuII CAGCTG 1 cut(s) 512
RsaI GTAC 4 cut(s) 140, 263, 446, 588
RsaNI GTAC 4 cut(s) 139, 262, 445, 587
SacI GAGCTC 2 cut(s) 249, 495
SaqAI TTAA 2 cut(s) 602, 804
SatI GCNGC 2 cut(s) 150, 513
Sau3AI GATC 3 cut(s) 268, 479, 808
Sau96I GGNCC 2 cut(s) 472, 473
SchI GAGTC 1 cut(s) 441
ScrFI CCNGG 4 cut(s) 81, 207, 274, 477
SduI GDGCHC 4 cut(s) 249, 476, 495, 628
SfaNI GCATC 4 cut(s) 454, 649, 770, 782
SfcI CTRYAG 2 cut(s) 291, 614
SmlI CTYRAG 1 cut(s) 767
SmoI CTYRAG 1 cut(s) 767
Sse9I AATT 7 cut(s) 92, 213, 371, 532, 599, 687, 714
SsiI CCGC 5 cut(s) 5, 116, 167, 210, 357
SspI AATATT 1 cut(s) 568
SspMI CTAG 2 cut(s) 227, 516
SstI GAGCTC 2 cut(s) 249, 495
StyD4I CCNGG 4 cut(s) 79, 205, 272, 475
StyI CCWWGG 1 cut(s) 848
TaaI ACNGT 2 cut(s) 449, 867
TaiI ACGT 2 cut(s) 135, 327
TasI AATT 7 cut(s) 92, 213, 371, 532, 599, 687, 714
TatI WGTACW 2 cut(s) 444, 586
TfiI GAWTC 3 cut(s) 17, 680, 707
Tru1I TTAA 2 cut(s) 602, 804
Tru9I TTAA 2 cut(s) 602, 804
TscAI CASTG 3 cut(s) 162, 447, 564
TseI GCWGC 2 cut(s) 149, 512
TspDTI ATGAA 2 cut(s) 597, 684
TspGWI ACGGA 1 cut(s) 239
TspRI CASTG 3 cut(s) 162, 447, 564
XapI RAATTY 2 cut(s) 371, 532
XspI CTAG 2 cut(s) 227, 516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.