Agamous-like MADS-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G57390 AT3G57390 AT3G57390 |
| fragaria_vesca | FvH4_4g20680 FvH4_4g20680 |
| malus_domestica | MD00G1106300.v1.1 |
| prunus_persica | Prupe.7G055900_v2.0.a1 Prupe.7G055900_v2.0.a1 Prupe.7G055900_v2.0.a1 |
| pyrus_communis | pycom14g06350 |
| rosa_chinensis | RchiOBHm_Chr3g0483031 |
| rosa_laevigata | RLG00000023305 |
| rosa_multiflora | Rmu_sc0000441.1_g000133 |
| rosa_roxburghii | Rroxscaffold_6G00398700 |
| rosa_rugosa | Rorug03G0203800 Rorug03G0203900 |
| rosa_samantha | Rh3AG251800 Rh3BG288400 Rh3CG286000 Rh3DG281600 |
| rosa_wichuraiana | Rw3G022780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 115, 120 |
| AcsI | RAATTY | 2 cut(s) | 234, 362 |
| AcuI | CTGAAG | 2 cut(s) | 279, 342 |
| AfaI | GTAC | 2 cut(s) | 153, 764 |
| AgsI | TTSAA | 8 cut(s) | 77, 130, 261, 345, 368, 389, 641, 708 |
| AleI | CACNNNNGTG | 1 cut(s) | 726 |
| AluBI | AGCT | 3 cut(s) | 202, 444, 463 |
| AluI | AGCT | 3 cut(s) | 202, 444, 463 |
| Alw21I | GWGCWC | 1 cut(s) | 723 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 430 |
| AoxI | GGCC | 2 cut(s) | 271, 436 |
| ApeKI | GCWGC | 3 cut(s) | 117, 137, 376 |
| ApoI | RAATTY | 2 cut(s) | 234, 362 |
| AspLEI | GCGC | 3 cut(s) | 306, 350, 627 |
| AspS9I | GGNCC | 1 cut(s) | 271 |
| BbsI | GAAGAC | 1 cut(s) | 545 |
| Bbv12I | GWGCWC | 1 cut(s) | 723 |
| BbvI | GCAGC | 3 cut(s) | 129, 149, 388 |
| BccI | CCATC | 3 cut(s) | 37, 428, 654 |
| BceAI | ACGGC | 2 cut(s) | 479, 677 |
| BfmI | CTRYAG | 1 cut(s) | 353 |
| BfoI | RGCGCY | 1 cut(s) | 307 |
| BisI | GCNGC | 4 cut(s) | 115, 118, 138, 377 |
| BlsI | GCNGC | 4 cut(s) | 116, 119, 139, 378 |
| BmcAI | AGTACT | 1 cut(s) | 153 |
| BmgT120I | GGNCC | 1 cut(s) | 271 |
| BmsI | GCATC | 1 cut(s) | 151 |
| BpiI | GAAGAC | 1 cut(s) | 545 |
| BpmI | CTGGAG | 1 cut(s) | 485 |
| Bpu10I | CCTNAGC | 1 cut(s) | 440 |
| BsaAI | YACGTR | 1 cut(s) | 766 |
| Bse1I | ACTGG | 2 cut(s) | 199, 435 |
| Bse3DI | GCAATG | 1 cut(s) | 378 |
| BseGI | GGATG | 4 cut(s) | 420, 439, 646, 683 |
| BseMI | GCAATG | 1 cut(s) | 378 |
| BseMII | CTCAG | 3 cut(s) | 97, 431, 708 |
| BseNI | ACTGG | 2 cut(s) | 199, 435 |
| BseRI | GAGGAG | 4 cut(s) | 266, 341, 542, 622 |
| BseXI | GCAGC | 3 cut(s) | 129, 149, 388 |
| BshFI | GGCC | 2 cut(s) | 273, 438 |
| BsiHKAI | GWGCWC | 1 cut(s) | 723 |
| BsmI | GAATGC | 1 cut(s) | 736 |
| BsnI | GGCC | 2 cut(s) | 273, 438 |
| Bsp1286I | GDGCHC | 1 cut(s) | 723 |
| Bsp143I | GATC | 1 cut(s) | 63 |
| BspACI | CCGC | 2 cut(s) | 115, 120 |
| BspANI | GGCC | 2 cut(s) | 273, 438 |
| BspCNI | CTCAG | 3 cut(s) | 96, 432, 709 |
| BspMAI | CTGCAG | 1 cut(s) | 357 |
| BspQI | GCTCTTC | 1 cut(s) | 294 |
| BsrDI | GCAATG | 1 cut(s) | 378 |
| BsrI | ACTGG | 2 cut(s) | 199, 435 |
| BssMI | GATC | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 1 cut(s) | 399 |
| Bst6I | CTCTTC | 3 cut(s) | 294, 318, 653 |
| BstBAI | YACGTR | 1 cut(s) | 766 |
| BstC8I | GCNNGC | 1 cut(s) | 92 |
| BstDEI | CTNAG | 4 cut(s) | 83, 440, 654, 717 |
| BstF5I | GGATG | 4 cut(s) | 420, 439, 646, 683 |
| BstH2I | RGCGCY | 1 cut(s) | 307 |
| BstHHI | GCGC | 3 cut(s) | 306, 350, 627 |
| BstKTI | GATC | 1 cut(s) | 66 |
| BstMBI | GATC | 1 cut(s) | 63 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 170 |
| BstSFI | CTRYAG | 1 cut(s) | 353 |
| BstSNI | TACGTA | 1 cut(s) | 766 |
| BstV1I | GCAGC | 3 cut(s) | 129, 149, 388 |
| BstV2I | GAAGAC | 1 cut(s) | 545 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 43 |
| BsuRI | GGCC | 2 cut(s) | 273, 438 |
| BtgZI | GCGATG | 1 cut(s) | 174 |
| BtsCI | GGATG | 4 cut(s) | 420, 439, 646, 683 |
| BtsI | GCAGTG | 1 cut(s) | 350 |
| BtsIMutI | CAGTG | 1 cut(s) | 350 |
| Cac8I | GCNNGC | 1 cut(s) | 92 |
| CaiI | CAGNNNCTG | 1 cut(s) | 430 |
| CfoI | GCGC | 3 cut(s) | 306, 350, 627 |
| Cfr13I | GGNCC | 1 cut(s) | 271 |
| Csp6I | GTAC | 2 cut(s) | 152, 763 |
| CviAII | CATG | 3 cut(s) | 226, 311, 554 |
| CviQI | GTAC | 2 cut(s) | 152, 763 |
| DdeI | CTNAG | 4 cut(s) | 83, 440, 654, 717 |
| DpnI | GATC | 1 cut(s) | 65 |
| DpnII | GATC | 1 cut(s) | 63 |
| Eam1104I | CTCTTC | 3 cut(s) | 294, 318, 653 |
| EarI | CTCTTC | 3 cut(s) | 294, 318, 653 |
| Eco105I | TACGTA | 1 cut(s) | 766 |
| Eco57I | CTGAAG | 2 cut(s) | 279, 342 |
| EcoO109I | RGGNCCY | 1 cut(s) | 271 |
| FaeI | CATG | 3 cut(s) | 229, 314, 557 |
| FatI | CATG | 3 cut(s) | 225, 310, 553 |
| Fnu4HI | GCNGC | 4 cut(s) | 115, 118, 138, 377 |
| FokI | GGATG | 4 cut(s) | 427, 446, 633, 670 |
| Fsp4HI | GCNGC | 4 cut(s) | 115, 118, 138, 377 |
| GlaI | GCGC | 3 cut(s) | 305, 349, 626 |
| GluI | GCNGC | 4 cut(s) | 115, 118, 138, 377 |
| GsuI | CTGGAG | 1 cut(s) | 485 |
| HaeII | RGCGCY | 1 cut(s) | 307 |
| HaeIII | GGCC | 2 cut(s) | 273, 438 |
| HhaI | GCGC | 3 cut(s) | 306, 350, 627 |
| Hin1II | CATG | 3 cut(s) | 229, 314, 557 |
| Hin6I | GCGC | 3 cut(s) | 304, 348, 625 |
| HinP1I | GCGC | 3 cut(s) | 304, 348, 625 |
| HindIII | AAGCTT | 1 cut(s) | 200 |
| HinfI | GANTC | 4 cut(s) | 314, 341, 580, 641 |
| Hpy188I | TCNGA | 6 cut(s) | 298, 414, 426, 526, 718, 742 |
| Hpy188III | TCNNGA | 3 cut(s) | 67, 130, 584 |
| HpyAV | CCTTC | 6 cut(s) | 127, 412, 476, 502, 553, 639 |
| HpyCH4III | ACNGT | 1 cut(s) | 399 |
| HpyCH4IV | ACGT | 2 cut(s) | 101, 765 |
| HpyCH4V | TGCA | 5 cut(s) | 173, 355, 376, 568, 754 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 170 |
| HpyF3I | CTNAG | 4 cut(s) | 83, 440, 654, 717 |
| HpySE526I | ACGT | 2 cut(s) | 101, 765 |
| Hsp92II | CATG | 3 cut(s) | 229, 314, 557 |
| HspAI | GCGC | 3 cut(s) | 304, 348, 625 |
| Kzo9I | GATC | 1 cut(s) | 63 |
| LguI | GCTCTTC | 1 cut(s) | 294 |
| LmnI | GCTCC | 2 cut(s) | 328, 550 |
| Lsp1109I | GCAGC | 3 cut(s) | 129, 149, 388 |
| LweI | GCATC | 1 cut(s) | 151 |
| MaeII | ACGT | 2 cut(s) | 101, 765 |
| MaeIII | GTNAC | 2 cut(s) | 97, 728 |
| MalI | GATC | 1 cut(s) | 65 |
| MboI | GATC | 1 cut(s) | 63 |
| MboII | GAAGA | 6 cut(s) | 82, 285, 311, 335, 550, 670 |
| MfeI | CAATTG | 2 cut(s) | 700, 755 |
| MhlI | GDGCHC | 1 cut(s) | 723 |
| MmeI | TCCRAC | 2 cut(s) | 381, 392 |
| MseI | TTAA | 2 cut(s) | 446, 498 |
| MslI | CAYNNNNRTG | 2 cut(s) | 224, 726 |
| MspA1I | CMGCKG | 1 cut(s) | 120 |
| MunI | CAATTG | 2 cut(s) | 700, 755 |
| Mva1269I | GAATGC | 1 cut(s) | 736 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 170 |
| NdeII | GATC | 1 cut(s) | 63 |
| NlaIII | CATG | 3 cut(s) | 229, 314, 557 |
| NmeAIII | GCCGAG | 1 cut(s) | 190 |
| NmuCI | GTSAC | 2 cut(s) | 97, 728 |
| OliI | CACNNNNGTG | 1 cut(s) | 726 |
| PciSI | GCTCTTC | 1 cut(s) | 294 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 729 |
| PctI | GAATGC | 1 cut(s) | 736 |
| PfeI | GAWTC | 4 cut(s) | 314, 341, 580, 641 |
| PkrI | GCNGC | 4 cut(s) | 116, 119, 139, 378 |
| Ppu21I | YACGTR | 1 cut(s) | 766 |
| PspPI | GGNCC | 1 cut(s) | 271 |
| PstI | CTGCAG | 1 cut(s) | 357 |
| PstNI | CAGNNNCTG | 1 cut(s) | 430 |
| RsaI | GTAC | 2 cut(s) | 153, 764 |
| RsaNI | GTAC | 2 cut(s) | 152, 763 |
| RseI | CAYNNNNRTG | 2 cut(s) | 224, 726 |
| SapI | GCTCTTC | 1 cut(s) | 294 |
| SaqAI | TTAA | 2 cut(s) | 446, 498 |
| SatI | GCNGC | 4 cut(s) | 115, 118, 138, 377 |
| Sau3AI | GATC | 1 cut(s) | 63 |
| Sau96I | GGNCC | 1 cut(s) | 271 |
| ScaI | AGTACT | 1 cut(s) | 153 |
| SduI | GDGCHC | 1 cut(s) | 723 |
| SetI | ASST | 7 cut(s) | 104, 204, 248, 446, 456, 465, 768 |
| SfaNI | GCATC | 1 cut(s) | 151 |
| SfcI | CTRYAG | 1 cut(s) | 353 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 224, 726 |
| SnaBI | TACGTA | 1 cut(s) | 766 |
| SsiI | CCGC | 2 cut(s) | 115, 120 |
| TaaI | ACNGT | 1 cut(s) | 399 |
| TaiI | ACGT | 2 cut(s) | 104, 768 |
| TaqI | TCGA | 1 cut(s) | 242 |
| TatI | WGTACW | 1 cut(s) | 151 |
| TauI | GCSGC | 1 cut(s) | 117 |
| TfiI | GAWTC | 4 cut(s) | 314, 341, 580, 641 |
| Tru1I | TTAA | 2 cut(s) | 446, 498 |
| Tru9I | TTAA | 2 cut(s) | 446, 498 |
| TscAI | CASTG | 1 cut(s) | 357 |
| TseFI | GTSAC | 2 cut(s) | 97, 728 |
| TseI | GCWGC | 3 cut(s) | 117, 137, 376 |
| Tsp45I | GTSAC | 2 cut(s) | 97, 728 |
| TspDTI | ATGAA | 3 cut(s) | 222, 327, 431 |
| TspRI | CASTG | 1 cut(s) | 357 |
| XapI | RAATTY | 2 cut(s) | 234, 362 |
| ZrmI | AGTACT | 1 cut(s) | 153 |