ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g13040 FvH4_4g13060 |
| malus_domestica | MD04G1020200.v1.1 |
| rosa_chinensis | RchiOBHm_Chr4g0412781 RchiOBHm_Chr4g0412791 |
| rosa_laevigata | RLG00000008259 |
| rosa_multiflora | Rmu_sc0001238.1_g000047 Rmu_sc0001569.1_g000012 Rmu_sc0041034.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00357040 |
| rosa_rugosa | Rorug04G0116800 |
| rosa_samantha | Rh4AG175500 Rh4BG175300 Rh4BG175400 Rh4CG186700 Rh4DG172300 Rh6CG426300 |
| rosa_wichuraiana | Rw4G014730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 270 |
| AccB1I | GGYRCC | 1 cut(s) | 240 |
| AccI | GTMKAC | 1 cut(s) | 112 |
| AclWI | GGATC | 1 cut(s) | 303 |
| AcsI | RAATTY | 1 cut(s) | 78 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 122 |
| AgsI | TTSAA | 2 cut(s) | 155, 264 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 70 |
| Alw26I | GTCTC | 1 cut(s) | 25 |
| AlwI | GGATC | 1 cut(s) | 303 |
| ApoI | RAATTY | 1 cut(s) | 78 |
| AsuHPI | GGTGA | 1 cut(s) | 298 |
| BanI | GGYRCC | 1 cut(s) | 240 |
| BbsI | GAAGAC | 1 cut(s) | 89 |
| BccI | CCATC | 1 cut(s) | 75 |
| BcoDI | GTCTC | 1 cut(s) | 25 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 70 |
| BmiI | GGNNCC | 1 cut(s) | 242 |
| BpiI | GAAGAC | 1 cut(s) | 89 |
| BsaJI | CCNNGG | 1 cut(s) | 223 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 122 |
| BseDI | CCNNGG | 1 cut(s) | 223 |
| BseGI | GGATG | 1 cut(s) | 98 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 122 |
| BseMII | CTCAG | 1 cut(s) | 134 |
| BshNI | GGYRCC | 1 cut(s) | 240 |
| BslFI | GGGAC | 1 cut(s) | 56 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 122 |
| BsmAI | GTCTC | 1 cut(s) | 25 |
| BsmFI | GGGAC | 1 cut(s) | 56 |
| Bsp143I | GATC | 1 cut(s) | 295 |
| BspCNI | CTCAG | 1 cut(s) | 133 |
| BspLI | GGNNCC | 1 cut(s) | 242 |
| BspPI | GGATC | 1 cut(s) | 303 |
| BspT107I | GGYRCC | 1 cut(s) | 240 |
| BssECI | CCNNGG | 1 cut(s) | 223 |
| BssMI | GATC | 1 cut(s) | 295 |
| BssT1I | CCWWGG | 1 cut(s) | 223 |
| Bst4CI | ACNGT | 3 cut(s) | 13, 256, 280 |
| BstDEI | CTNAG | 1 cut(s) | 120 |
| BstF5I | GGATG | 1 cut(s) | 98 |
| BstKTI | GATC | 1 cut(s) | 298 |
| BstMAI | GTCTC | 1 cut(s) | 25 |
| BstMBI | GATC | 1 cut(s) | 295 |
| BstV2I | GAAGAC | 1 cut(s) | 89 |
| BtsCI | GGATG | 1 cut(s) | 98 |
| CviJI | RGCY | 1 cut(s) | 313 |
| CviKI_1 | RGCY | 1 cut(s) | 313 |
| DdeI | CTNAG | 1 cut(s) | 120 |
| DpnI | GATC | 1 cut(s) | 297 |
| DpnII | GATC | 1 cut(s) | 295 |
| DriI | GACNNNNNGTC | 1 cut(s) | 70 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 70 |
| Eco130I | CCWWGG | 1 cut(s) | 223 |
| EcoT14I | CCWWGG | 1 cut(s) | 223 |
| ErhI | CCWWGG | 1 cut(s) | 223 |
| FaiI | YATR | 8 cut(s) | 36, 53, 137, 139, 141, 251, 270, 300 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 302, 334 |
| FaqI | GGGAC | 1 cut(s) | 56 |
| FblI | GTMKAC | 1 cut(s) | 112 |
| FokI | GGATG | 1 cut(s) | 105 |
| HinfI | GANTC | 1 cut(s) | 44 |
| HphI | GGTGA | 1 cut(s) | 298 |
| Hpy166II | GTNNAC | 2 cut(s) | 113, 235 |
| Hpy188I | TCNGA | 1 cut(s) | 9 |
| Hpy188III | TCNNGA | 1 cut(s) | 75 |
| Hpy8I | GTNNAC | 2 cut(s) | 113, 235 |
| HpyAV | CCTTC | 2 cut(s) | 270, 286 |
| HpyCH4III | ACNGT | 3 cut(s) | 13, 256, 280 |
| HpyCH4V | TGCA | 2 cut(s) | 57, 339 |
| HpyF3I | CTNAG | 1 cut(s) | 120 |
| Kzo9I | GATC | 1 cut(s) | 295 |
| LpnPI | CCDG | 2 cut(s) | 60, 107 |
| MaeIII | GTNAC | 1 cut(s) | 218 |
| MalI | GATC | 1 cut(s) | 297 |
| MboI | GATC | 1 cut(s) | 295 |
| MboII | GAAGA | 1 cut(s) | 89 |
| MluCI | AATT | 3 cut(s) | 58, 78, 271 |
| MlyI | GAGTC | 1 cut(s) | 38 |
| MmeI | TCCRAC | 2 cut(s) | 8, 193 |
| MnlI | CCTC | 2 cut(s) | 195, 254 |
| MseI | TTAA | 3 cut(s) | 87, 306, 326 |
| NdeII | GATC | 1 cut(s) | 295 |
| NlaIV | GGNNCC | 1 cut(s) | 242 |
| PleI | GAGTC | 1 cut(s) | 38 |
| PpsI | GAGTC | 1 cut(s) | 38 |
| PsiI | TTATAA | 1 cut(s) | 270 |
| PspN4I | GGNNCC | 1 cut(s) | 242 |
| SaqAI | TTAA | 3 cut(s) | 87, 306, 326 |
| Sau3AI | GATC | 1 cut(s) | 295 |
| SchI | GAGTC | 1 cut(s) | 38 |
| SetI | ASST | 3 cut(s) | 112, 187, 225 |
| SgeI | CNNG | 9 cut(s) | 87, 134, 141, 217, 236, 250, 276, 327, 331 |
| Sse9I | AATT | 3 cut(s) | 58, 78, 271 |
| StyI | CCWWGG | 1 cut(s) | 223 |
| TaaI | ACNGT | 3 cut(s) | 13, 256, 280 |
| TasI | AATT | 3 cut(s) | 58, 78, 271 |
| Tru1I | TTAA | 3 cut(s) | 87, 306, 326 |
| Tru9I | TTAA | 3 cut(s) | 87, 306, 326 |
| TspDTI | ATGAA | 2 cut(s) | 89, 305 |
| XapI | RAATTY | 1 cut(s) | 78 |
| XmiI | GTMKAC | 1 cut(s) | 112 |