No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g10321 |
| pyrus_communis | pycom01g05520 |
| rosa_chinensis | RchiOBHm_Chr2g0137491 |
| rosa_laevigata | RLG00000007619 RLG00000032972 |
| rosa_roxburghii | Rroxscaffold_5G00364430 |
| rosa_samantha | Rh1BG114400 Rh1BG174800 Rh1BG175100 Rh1DG204300 Rh1DG204600 Rh4BG227400 Rh4BG242200 Rh4DG237600 Rh7AG219100 Rh7BG215600 |
| rosa_wichuraiana | Rw7G022860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 23 |
| AatII | GACGTC | 1 cut(s) | 21 |
| AciI | CCGC | 2 cut(s) | 105, 126 |
| AcyI | GRCGYC | 2 cut(s) | 18, 48 |
| AfaI | GTAC | 1 cut(s) | 75 |
| AflIII | ACRYGT | 1 cut(s) | 85 |
| AgsI | TTSAA | 2 cut(s) | 80, 148 |
| AjiI | CACGTC | 1 cut(s) | 88 |
| AluBI | AGCT | 1 cut(s) | 70 |
| AluI | AGCT | 1 cut(s) | 70 |
| Ama87I | CYCGRG | 1 cut(s) | 62 |
| AsuHPI | GGTGA | 1 cut(s) | 44 |
| AvaI | CYCGRG | 1 cut(s) | 62 |
| BbsI | GAAGAC | 1 cut(s) | 49 |
| BccI | CCATC | 1 cut(s) | 131 |
| BmeT110I | CYCGRG | 1 cut(s) | 62 |
| BmgBI | CACGTC | 1 cut(s) | 88 |
| BmsI | GCATC | 1 cut(s) | 13 |
| BpiI | GAAGAC | 1 cut(s) | 49 |
| BsaHI | GRCGYC | 2 cut(s) | 18, 48 |
| BsaJI | CCNNGG | 1 cut(s) | 61 |
| BseDI | CCNNGG | 1 cut(s) | 61 |
| BsiHKCI | CYCGRG | 1 cut(s) | 62 |
| BsoBI | CYCGRG | 1 cut(s) | 62 |
| Bsp143I | GATC | 1 cut(s) | 40 |
| BspACI | CCGC | 2 cut(s) | 105, 126 |
| BssECI | CCNNGG | 1 cut(s) | 61 |
| BssMI | GATC | 1 cut(s) | 40 |
| BssNI | GRCGYC | 2 cut(s) | 18, 48 |
| Bst4CI | ACNGT | 1 cut(s) | 152 |
| BstACI | GRCGYC | 2 cut(s) | 18, 48 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 10 |
| BstC8I | GCNNGC | 1 cut(s) | 114 |
| BstEII | GGTNACC | 1 cut(s) | 32 |
| BstKTI | GATC | 1 cut(s) | 43 |
| BstMBI | GATC | 1 cut(s) | 40 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstPI | GGTNACC | 1 cut(s) | 32 |
| BstV2I | GAAGAC | 1 cut(s) | 49 |
| BtrI | CACGTC | 1 cut(s) | 88 |
| Cac8I | GCNNGC | 1 cut(s) | 114 |
| CseI | GACGC | 1 cut(s) | 37 |
| Csp6I | GTAC | 1 cut(s) | 74 |
| CviAII | CATG | 1 cut(s) | 8 |
| CviJI | RGCY | 2 cut(s) | 70, 112 |
| CviKI_1 | RGCY | 2 cut(s) | 70, 112 |
| CviQI | GTAC | 1 cut(s) | 74 |
| DpnI | GATC | 1 cut(s) | 42 |
| DpnII | GATC | 1 cut(s) | 40 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 23 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 23 |
| EciI | GGCGGA | 2 cut(s) | 120, 141 |
| Eco88I | CYCGRG | 1 cut(s) | 62 |
| Eco91I | GGTNACC | 1 cut(s) | 32 |
| EcoO65I | GGTNACC | 1 cut(s) | 32 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 1 cut(s) | 11 |
| FaiI | YATR | 1 cut(s) | 9 |
| FatI | CATG | 1 cut(s) | 7 |
| HgaI | GACGC | 1 cut(s) | 37 |
| Hin1I | GRCGYC | 2 cut(s) | 18, 48 |
| Hin1II | CATG | 1 cut(s) | 11 |
| HphI | GGTGA | 1 cut(s) | 44 |
| Hpy99I | CGWCG | 4 cut(s) | 23, 26, 29, 92 |
| HpyCH4III | ACNGT | 1 cut(s) | 152 |
| HpyCH4IV | ACGT | 2 cut(s) | 18, 87 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| HpySE526I | ACGT | 2 cut(s) | 18, 87 |
| Hsp92I | GRCGYC | 2 cut(s) | 18, 48 |
| Hsp92II | CATG | 1 cut(s) | 11 |
| Kzo9I | GATC | 1 cut(s) | 40 |
| LmnI | GCTCC | 1 cut(s) | 67 |
| LpnPI | CCDG | 2 cut(s) | 56, 126 |
| LweI | GCATC | 1 cut(s) | 13 |
| MaeII | ACGT | 2 cut(s) | 18, 87 |
| MaeIII | GTNAC | 1 cut(s) | 32 |
| MalI | GATC | 1 cut(s) | 42 |
| MboI | GATC | 1 cut(s) | 40 |
| MboII | GAAGA | 1 cut(s) | 49 |
| MnlI | CCTC | 3 cut(s) | 71, 94, 115 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| NdeII | GATC | 1 cut(s) | 40 |
| NlaIII | CATG | 1 cut(s) | 11 |
| NmuCI | GTSAC | 1 cut(s) | 32 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 24 |
| PflFI | GACNNNGTC | 1 cut(s) | 20 |
| PspEI | GGTNACC | 1 cut(s) | 32 |
| PsyI | GACNNNGTC | 1 cut(s) | 20 |
| RsaI | GTAC | 1 cut(s) | 75 |
| RsaNI | GTAC | 1 cut(s) | 74 |
| Sau3AI | GATC | 1 cut(s) | 40 |
| SetI | ASST | 4 cut(s) | 21, 57, 72, 90 |
| SfaNI | GCATC | 1 cut(s) | 13 |
| SsiI | CCGC | 2 cut(s) | 105, 126 |
| TaaI | ACNGT | 1 cut(s) | 152 |
| TaiI | ACGT | 2 cut(s) | 21, 90 |
| TaqII | GACCGA | 1 cut(s) | 51 |
| TseFI | GTSAC | 1 cut(s) | 32 |
| Tsp45I | GTSAC | 1 cut(s) | 32 |
| Tth111I | GACNNNGTC | 1 cut(s) | 20 |
| ZraI | GACGTC | 1 cut(s) | 19 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |