No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g10321 |
| pyrus_communis | pycom01g05520 |
| rosa_chinensis | RchiOBHm_Chr2g0137491 |
| rosa_laevigata | RLG00000007619 RLG00000032972 |
| rosa_roxburghii | Rroxscaffold_5G00364430 |
| rosa_samantha | Rh1BG114400 Rh1BG174800 Rh1BG175100 Rh1DG204300 Rh1DG204600 Rh4BG227400 Rh4BG242200 Rh4DG237600 Rh7AG219100 Rh7BG215600 |
| rosa_wichuraiana | Rw7G022860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 88 |
| AfaI | GTAC | 2 cut(s) | 35, 149 |
| AgsI | TTSAA | 1 cut(s) | 223 |
| AoxI | GGCC | 1 cut(s) | 88 |
| AspLEI | GCGC | 1 cut(s) | 173 |
| AsuHPI | GGTGA | 1 cut(s) | 25 |
| AsuNHI | GCTAGC | 1 cut(s) | 119 |
| BalI | TGGCCA | 1 cut(s) | 90 |
| BfaI | CTAG | 1 cut(s) | 120 |
| BmtI | GCTAGC | 1 cut(s) | 123 |
| BsaJI | CCNNGG | 1 cut(s) | 151 |
| Bse118I | RCCGGY | 1 cut(s) | 24 |
| BseDI | CCNNGG | 1 cut(s) | 151 |
| BshFI | GGCC | 1 cut(s) | 90 |
| BsiSI | CCGG | 1 cut(s) | 25 |
| BsmI | GAATGC | 1 cut(s) | 72 |
| BsnI | GGCC | 1 cut(s) | 90 |
| Bsp19I | CCATGG | 1 cut(s) | 151 |
| BspANI | GGCC | 1 cut(s) | 90 |
| BspHI | TCATGA | 1 cut(s) | 136 |
| BspOI | GCTAGC | 1 cut(s) | 123 |
| BsrFI | RCCGGY | 1 cut(s) | 24 |
| BssAI | RCCGGY | 1 cut(s) | 24 |
| BssECI | CCNNGG | 1 cut(s) | 151 |
| BssT1I | CCWWGG | 1 cut(s) | 151 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 67 |
| BstC8I | GCNNGC | 3 cut(s) | 22, 26, 121 |
| BstDSI | CCRYGG | 1 cut(s) | 151 |
| BstHHI | GCGC | 1 cut(s) | 173 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 67, 239 |
| BsuRI | GGCC | 1 cut(s) | 90 |
| BtgI | CCRYGG | 1 cut(s) | 151 |
| Cac8I | GCNNGC | 3 cut(s) | 22, 26, 121 |
| CciI | TCATGA | 1 cut(s) | 136 |
| CfoI | GCGC | 1 cut(s) | 173 |
| Cfr10I | RCCGGY | 1 cut(s) | 24 |
| Csp6I | GTAC | 2 cut(s) | 34, 148 |
| CviAII | CATG | 4 cut(s) | 62, 137, 152, 229 |
| CviJI | RGCY | 5 cut(s) | 28, 90, 113, 119, 233 |
| CviKI_1 | RGCY | 5 cut(s) | 28, 90, 113, 119, 233 |
| CviQI | GTAC | 2 cut(s) | 34, 148 |
| EaeI | YGGCCR | 1 cut(s) | 88 |
| Eco130I | CCWWGG | 1 cut(s) | 151 |
| EcoT14I | CCWWGG | 1 cut(s) | 151 |
| EcoT22I | ATGCAT | 1 cut(s) | 63 |
| ErhI | CCWWGG | 1 cut(s) | 151 |
| FaeI | CATG | 4 cut(s) | 65, 140, 155, 232 |
| FaiI | YATR | 9 cut(s) | 59, 63, 87, 128, 138, 153, 177, 204, 230 |
| FatI | CATG | 4 cut(s) | 61, 136, 151, 228 |
| FspBI | CTAG | 1 cut(s) | 120 |
| GlaI | GCGC | 1 cut(s) | 172 |
| HaeIII | GGCC | 1 cut(s) | 90 |
| HapII | CCGG | 1 cut(s) | 25 |
| HhaI | GCGC | 1 cut(s) | 173 |
| Hin1II | CATG | 4 cut(s) | 65, 140, 155, 232 |
| Hin6I | GCGC | 1 cut(s) | 171 |
| HinP1I | GCGC | 1 cut(s) | 171 |
| HinfI | GANTC | 1 cut(s) | 207 |
| HpaII | CCGG | 1 cut(s) | 25 |
| HphI | GGTGA | 1 cut(s) | 25 |
| Hpy188I | TCNGA | 1 cut(s) | 46 |
| Hpy188III | TCNNGA | 1 cut(s) | 137 |
| HpyCH4IV | ACGT | 2 cut(s) | 100, 146 |
| HpyCH4V | TGCA | 3 cut(s) | 61, 70, 242 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 67, 239 |
| HpySE526I | ACGT | 2 cut(s) | 100, 146 |
| Hsp92II | CATG | 4 cut(s) | 65, 140, 155, 232 |
| HspAI | GCGC | 1 cut(s) | 171 |
| KroI | GCCGGC | 1 cut(s) | 24 |
| KroNI | GCCGGC | 1 cut(s) | 26 |
| LmnI | GCTCC | 1 cut(s) | 184 |
| LpnPI | CCDG | 1 cut(s) | 38 |
| MaeI | CTAG | 1 cut(s) | 120 |
| MaeII | ACGT | 2 cut(s) | 100, 146 |
| MlsI | TGGCCA | 1 cut(s) | 90 |
| MluNI | TGGCCA | 1 cut(s) | 90 |
| MmeI | TCCRAC | 1 cut(s) | 177 |
| MnlI | CCTC | 3 cut(s) | 42, 103, 144 |
| Mox20I | TGGCCA | 1 cut(s) | 90 |
| Mph1103I | ATGCAT | 1 cut(s) | 63 |
| MroNI | GCCGGC | 1 cut(s) | 24 |
| MscI | TGGCCA | 1 cut(s) | 90 |
| MseI | TTAA | 1 cut(s) | 250 |
| Msp20I | TGGCCA | 1 cut(s) | 90 |
| MspI | CCGG | 1 cut(s) | 25 |
| Mva1269I | GAATGC | 1 cut(s) | 72 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 67, 239 |
| NaeI | GCCGGC | 1 cut(s) | 26 |
| NcoI | CCATGG | 1 cut(s) | 151 |
| NgoMIV | GCCGGC | 1 cut(s) | 24 |
| NheI | GCTAGC | 1 cut(s) | 119 |
| NlaIII | CATG | 4 cut(s) | 65, 140, 155, 232 |
| NsiI | ATGCAT | 1 cut(s) | 63 |
| PagI | TCATGA | 1 cut(s) | 136 |
| PctI | GAATGC | 1 cut(s) | 72 |
| PdiI | GCCGGC | 1 cut(s) | 26 |
| PfeI | GAWTC | 1 cut(s) | 207 |
| RsaI | GTAC | 2 cut(s) | 35, 149 |
| RsaNI | GTAC | 2 cut(s) | 34, 148 |
| SaqAI | TTAA | 1 cut(s) | 250 |
| SetI | ASST | 4 cut(s) | 82, 103, 149, 250 |
| SspMI | CTAG | 1 cut(s) | 120 |
| StyI | CCWWGG | 1 cut(s) | 151 |
| TaiI | ACGT | 2 cut(s) | 103, 149 |
| TfiI | GAWTC | 1 cut(s) | 207 |
| Tru1I | TTAA | 1 cut(s) | 250 |
| Tru9I | TTAA | 1 cut(s) | 250 |
| TspDTI | ATGAA | 1 cut(s) | 153 |
| XspI | CTAG | 1 cut(s) | 120 |
| Zsp2I | ATGCAT | 1 cut(s) | 63 |