Origin recognition complex subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0225881 |
| rosa_laevigata | RLG00000007807 RLG00000022424 RLG00000030506 |
| rosa_multiflora | Rmu_sc0011298.1_g000004 |
| rosa_rugosa | Rorug07G0298300 |
| rosa_samantha | Rh4BG123000 Rh4BG230400 Rh4CG152000 Rh5CG327200 Rh6CG044700 Rh6DG481100 Rh7AG453900 |
| rosa_wichuraiana | Rw3G017580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 26 |
| Acc36I | ACCTGC | 1 cut(s) | 157 |
| AccII | CGCG | 1 cut(s) | 139 |
| AcuI | CTGAAG | 1 cut(s) | 104 |
| AfaI | GTAC | 1 cut(s) | 136 |
| AflIII | ACRYGT | 1 cut(s) | 137 |
| AluBI | AGCT | 2 cut(s) | 82, 250 |
| AluI | AGCT | 2 cut(s) | 82, 250 |
| Alw21I | GWGCWC | 1 cut(s) | 252 |
| AoxI | GGCC | 1 cut(s) | 115 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 265 |
| AspLEI | GCGC | 1 cut(s) | 27 |
| AsuHPI | GGTGA | 2 cut(s) | 212, 227 |
| BanII | GRGCYC | 1 cut(s) | 252 |
| Bbv12I | GWGCWC | 1 cut(s) | 252 |
| BccI | CCATC | 1 cut(s) | 188 |
| BfuAI | ACCTGC | 1 cut(s) | 157 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 114 |
| BmsI | GCATC | 1 cut(s) | 233 |
| Bse118I | RCCGGY | 1 cut(s) | 99 |
| BseRI | GAGGAG | 1 cut(s) | 248 |
| Bsh1236I | CGCG | 1 cut(s) | 139 |
| BshFI | GGCC | 1 cut(s) | 117 |
| BsiHKAI | GWGCWC | 1 cut(s) | 252 |
| BsiSI | CCGG | 1 cut(s) | 100 |
| BsnI | GGCC | 1 cut(s) | 117 |
| Bsp1286I | GDGCHC | 1 cut(s) | 252 |
| BspANI | GGCC | 1 cut(s) | 117 |
| BspFNI | CGCG | 1 cut(s) | 139 |
| BspMI | ACCTGC | 1 cut(s) | 157 |
| BsrFI | RCCGGY | 1 cut(s) | 99 |
| BssAI | RCCGGY | 1 cut(s) | 99 |
| Bst6I | CTCTTC | 2 cut(s) | 155, 225 |
| BstC8I | GCNNGC | 2 cut(s) | 154, 248 |
| BstFNI | CGCG | 1 cut(s) | 139 |
| BstHHI | GCGC | 1 cut(s) | 27 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 105, 114 |
| BstUI | CGCG | 1 cut(s) | 139 |
| BsuRI | GGCC | 1 cut(s) | 117 |
| BveI | ACCTGC | 1 cut(s) | 157 |
| Cac8I | GCNNGC | 2 cut(s) | 154, 248 |
| CfoI | GCGC | 1 cut(s) | 27 |
| Cfr10I | RCCGGY | 1 cut(s) | 99 |
| Csp6I | GTAC | 1 cut(s) | 135 |
| CviAII | CATG | 1 cut(s) | 119 |
| CviJI | RGCY | 4 cut(s) | 82, 117, 152, 250 |
| CviKI_1 | RGCY | 4 cut(s) | 82, 117, 152, 250 |
| CviQI | GTAC | 1 cut(s) | 135 |
| Eam1104I | CTCTTC | 2 cut(s) | 155, 225 |
| EarI | CTCTTC | 2 cut(s) | 155, 225 |
| Ecl136II | GAGCTC | 1 cut(s) | 250 |
| Eco24I | GRGCYC | 1 cut(s) | 252 |
| Eco53kI | GAGCTC | 1 cut(s) | 250 |
| Eco57I | CTGAAG | 1 cut(s) | 104 |
| EcoICRI | GAGCTC | 1 cut(s) | 250 |
| EcoT38I | GRGCYC | 1 cut(s) | 252 |
| FaeI | CATG | 1 cut(s) | 122 |
| FaiI | YATR | 3 cut(s) | 120, 149, 192 |
| FatI | CATG | 1 cut(s) | 118 |
| FriOI | GRGCYC | 1 cut(s) | 252 |
| FspI | TGCGCA | 1 cut(s) | 26 |
| GlaI | GCGC | 1 cut(s) | 26 |
| HaeIII | GGCC | 1 cut(s) | 117 |
| HapII | CCGG | 1 cut(s) | 100 |
| HhaI | GCGC | 1 cut(s) | 27 |
| Hin1II | CATG | 1 cut(s) | 122 |
| Hin6I | GCGC | 1 cut(s) | 25 |
| HinP1I | GCGC | 1 cut(s) | 25 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HpaII | CCGG | 1 cut(s) | 100 |
| HphI | GGTGA | 2 cut(s) | 212, 227 |
| Hpy166II | GTNNAC | 2 cut(s) | 6, 175 |
| Hpy188I | TCNGA | 1 cut(s) | 254 |
| Hpy8I | GTNNAC | 2 cut(s) | 6, 175 |
| Hpy99I | CGWCG | 1 cut(s) | 258 |
| HpyAV | CCTTC | 3 cut(s) | 57, 121, 175 |
| HpyCH4V | TGCA | 1 cut(s) | 156 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 105, 114 |
| Hsp92II | CATG | 1 cut(s) | 122 |
| HspAI | GCGC | 1 cut(s) | 25 |
| LmnI | GCTCC | 1 cut(s) | 255 |
| LpnPI | CCDG | 4 cut(s) | 113, 122, 152, 255 |
| LweI | GCATC | 1 cut(s) | 233 |
| MboII | GAAGA | 3 cut(s) | 172, 242, 252 |
| MhlI | GDGCHC | 1 cut(s) | 252 |
| MluI | ACGCGT | 1 cut(s) | 137 |
| MmeI | TCCRAC | 1 cut(s) | 277 |
| MnlI | CCTC | 8 cut(s) | 107, 117, 156, 191, 202, 226, 251, 269 |
| MroXI | GAANNNNTTC | 1 cut(s) | 265 |
| MspI | CCGG | 1 cut(s) | 100 |
| MvnI | CGCG | 1 cut(s) | 139 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 105, 114 |
| NlaIII | CATG | 1 cut(s) | 122 |
| NsbI | TGCGCA | 1 cut(s) | 26 |
| PdmI | GAANNNNTTC | 1 cut(s) | 265 |
| Psp124BI | GAGCTC | 1 cut(s) | 252 |
| RsaI | GTAC | 1 cut(s) | 136 |
| RsaNI | GTAC | 1 cut(s) | 135 |
| SacI | GAGCTC | 1 cut(s) | 252 |
| SduI | GDGCHC | 1 cut(s) | 252 |
| SetI | ASST | 8 cut(s) | 84, 132, 171, 186, 202, 213, 252, 274 |
| SfaNI | GCATC | 1 cut(s) | 233 |
| SgrAI | CRCCGGYG | 1 cut(s) | 99 |
| SstI | GAGCTC | 1 cut(s) | 252 |
| TaqI | TCGA | 2 cut(s) | 49, 89 |
| XmnI | GAANNNNTTC | 1 cut(s) | 265 |