Rh6CG044700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
4426868 .. 4427101
234 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG044700.1

Sequence Viewer

Length: 234 bp
ATGTCAACACCCCCAAATCTATTGCGCAATACAAGAAATCAAAGAAATCGAAGCACAACCCTCCGCCAGTCCGGCGTCCTCCTCCAAGCCATGCAGCAGTCCGCCGGCGAAGAAACCTGTGGAAGAACTAGCGGCGGAACGCTAAGTGGTGCAGCGAGAAGTAACGGAGGAAGGAGAGAGAATACGCATCGACGCGACGGAGCTTCCTTGATTCTTCACCCCACTCATCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

77

Amino Acids

8.34

Weight (kDa)

11.92

Isoelectric Point (pI)

73.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 26
AccII CGCG 1 cut(s) 195
AciI CCGC 4 cut(s) 64, 102, 132, 135
AcyI GRCGYC 1 cut(s) 75
AluBI AGCT 1 cut(s) 203
AluI AGCT 1 cut(s) 203
ApeKI GCWGC 2 cut(s) 94, 152
AspLEI GCGC 1 cut(s) 27
AsuHPI GGTGA 1 cut(s) 209
BbvI GCAGC 2 cut(s) 106, 164
BfaI CTAG 2 cut(s) 129, 232
BglI GCCNNNNNGGC 1 cut(s) 72
BisI GCNGC 3 cut(s) 95, 133, 153
BlsI GCNGC 3 cut(s) 96, 134, 154
BmsI GCATC 1 cut(s) 196
BsaHI GRCGYC 1 cut(s) 75
Bse118I RCCGGY 1 cut(s) 104
Bse1I ACTGG 1 cut(s) 67
BseNI ACTGG 1 cut(s) 67
BseRI GAGGAG 1 cut(s) 71
BseXI GCAGC 2 cut(s) 106, 164
BsgI GTGCAG 1 cut(s) 171
Bsh1236I CGCG 1 cut(s) 195
BsiSI CCGG 2 cut(s) 72, 105
BspACI CCGC 4 cut(s) 64, 102, 132, 135
BspFNI CGCG 1 cut(s) 195
BsrFI RCCGGY 1 cut(s) 104
BsrI ACTGG 1 cut(s) 67
BssAI RCCGGY 1 cut(s) 104
BssNI GRCGYC 1 cut(s) 75
BstACI GRCGYC 1 cut(s) 75
BstC8I GCNNGC 1 cut(s) 106
BstDEI CTNAG 1 cut(s) 143
BstFNI CGCG 1 cut(s) 195
BstHHI GCGC 1 cut(s) 27
BstMWI GCNNNNNNNGC 1 cut(s) 72
BstUI CGCG 1 cut(s) 195
BstV1I GCAGC 2 cut(s) 106, 164
Cac8I GCNNGC 1 cut(s) 106
CfoI GCGC 1 cut(s) 27
Cfr10I RCCGGY 1 cut(s) 104
CseI GACGC 2 cut(s) 64, 201
CviAII CATG 1 cut(s) 91
CviJI RGCY 2 cut(s) 89, 203
CviKI_1 RGCY 2 cut(s) 89, 203
DdeI CTNAG 1 cut(s) 143
EciI GGCGGA 3 cut(s) 53, 91, 150
FaeI CATG 1 cut(s) 94
FaiI YATR 1 cut(s) 92
FatI CATG 1 cut(s) 90
Fnu4HI GCNGC 3 cut(s) 95, 133, 153
Fsp4HI GCNGC 3 cut(s) 95, 133, 153
FspBI CTAG 2 cut(s) 129, 232
FspI TGCGCA 1 cut(s) 26
GlaI GCGC 1 cut(s) 26
GluI GCNGC 3 cut(s) 95, 133, 153
HapII CCGG 2 cut(s) 72, 105
HgaI GACGC 2 cut(s) 64, 201
HhaI GCGC 1 cut(s) 27
Hin1I GRCGYC 1 cut(s) 75
Hin1II CATG 1 cut(s) 94
Hin6I GCGC 1 cut(s) 25
HinP1I GCGC 1 cut(s) 25
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 1 cut(s) 211
HpaII CCGG 2 cut(s) 72, 105
HphI GGTGA 1 cut(s) 209
Hpy166II GTNNAC 1 cut(s) 6
Hpy8I GTNNAC 1 cut(s) 6
Hpy99I CGWCG 2 cut(s) 195, 200
HpyAV CCTTC 1 cut(s) 165
HpyCH4V TGCA 2 cut(s) 94, 152
HpyF10VI GCNNNNNNNGC 1 cut(s) 72
HpyF3I CTNAG 1 cut(s) 143
Hsp92I GRCGYC 1 cut(s) 75
Hsp92II CATG 1 cut(s) 94
HspAI GCGC 1 cut(s) 25
KroI GCCGGC 1 cut(s) 104
KroNI GCCGGC 1 cut(s) 106
LmnI GCTCC 1 cut(s) 200
LpnPI CCDG 4 cut(s) 80, 85, 118, 130
Lsp1109I GCAGC 2 cut(s) 106, 164
LweI GCATC 1 cut(s) 196
MaeI CTAG 2 cut(s) 129, 232
MaeIII GTNAC 1 cut(s) 161
MboII GAAGA 3 cut(s) 122, 135, 206
MnlI CCTC 4 cut(s) 71, 89, 92, 161
MreI CGCCGGCG 1 cut(s) 104
MroNI GCCGGC 1 cut(s) 104
MspI CCGG 2 cut(s) 72, 105
MvnI CGCG 1 cut(s) 195
MwoI GCNNNNNNNGC 1 cut(s) 72
NaeI GCCGGC 1 cut(s) 106
NgoMIV GCCGGC 1 cut(s) 104
NlaIII CATG 1 cut(s) 94
NsbI TGCGCA 1 cut(s) 26
PdiI GCCGGC 1 cut(s) 106
PfeI GAWTC 1 cut(s) 211
PkrI GCNGC 3 cut(s) 96, 134, 154
SatI GCNGC 3 cut(s) 95, 133, 153
SetI ASST 2 cut(s) 119, 205
SfaNI GCATC 1 cut(s) 196
SgrAI CRCCGGYG 1 cut(s) 104
SsiI CCGC 4 cut(s) 64, 102, 132, 135
SspMI CTAG 2 cut(s) 129, 232
TaqI TCGA 2 cut(s) 49, 190
TauI GCSGC 1 cut(s) 135
TfiI GAWTC 1 cut(s) 211
TseI GCWGC 2 cut(s) 94, 152
TspGWI ACGGA 2 cut(s) 180, 213
XspI CTAG 2 cut(s) 129, 232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.