Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0012147

Physical Location & Seq

Genomic Coordinates Forward (+)

53948029 .. 53950684

Gene Structure 2656 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG385200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1122 bp

ATGACCAAGACAAAAAGGTCCCCATTCTTTGTAGAGAACTTTGAGCTTAACAAAACCCTAATATTTGATTCCCGATTCCCAACCCAATTCATGGACTTTAAGCCCATTTCTACCACCGCCACCGCCACCATCAATACTCCAGATACAGACACTGAGCTCATCCCCACATCAGACCCCAAATCTGGCGCCTTTAGGTCCTTATCCTTCAACAACGGCCCACTCAAGCCCCACCACCCACTTCCTCCGCCGCCTCATACGGCGGTTGTGTACCGAGAATGTTTGAAGAACCACGCGGCCAGCCTCGGCGGCCACGCCCTCGACGGCTGCGGTGAGTTTTTCCCCAGCCCCATTTCCAACCCCGCCGACCCCACCTCGCTAAAATGCGCCGCCTGCGGCTGCCACCGCAACTTCCACCGCCGCGACGCGCCTGACGAACGACGCGCGTTCACTCCTCCAAAGGCCCTTCTCGTCAGCCCTACTCCTCACCACCGCCTTCTTCCTCCGCCGCCAGCTCAGCACAGCTCAAGCCCAAGCCCAAGCCGGAGCACGAGCCCGGGCCCAAGCACCACGTTGAGCCCGCACTCTCCGCCGCCGGTCTCGCACGTGCCGCCCTCCTTCTTCGGCACACCCTCCCAGATGCTCCTCGCCCTCAGCTCCGCCGCGTTTACCGCGCCACCACCGTCGGATGAGAAGGTCCGGAATCCGACGGCTGGGAAGACGGGGAGGAAGAGATCGAGGACCAAGTTCAGCCAGGAGCAGAAGGACAAGATGTTCTGTTTTGCTGACAAACTAGGCTGGAAACTGCAGAGGAGCGAAGAGAAGTTCGTCGAGGATTTCTGCGACGAGATTGGGATTGGTCGGAACGTTTTTAAGGTTTGGATGCATAACAACAAGCACCACATGATGAAGAAGCAGAGGTTGTTGTCGTCGGCCGGGTTGATCAATGACGGTGACGACGGCGGTGATGCCGGCGGAGGAGCTAGCTTTGATTCCACTGCTGAGGAGAACAACAACAACAACAATGTGAATGTCATTATCGACTCCCACAATGAAAGTAGCAGAGATCATCACCACCACCAAAGGTTTTATCTTTCCAACAATGGGTCCTCTTCTTCGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0010035 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046983 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ZF-HD_dimer

Protein Analysis

373

Amino Acids

40.92

Weight (kDa)

8.92

Isoelectric Point (pI)

65.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ZF-HD_dimer	PF04770	88 - 141	3.2e-27	ZF-HD protein dimerisation region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69600 AT5G60480
fragaria_vesca	FvH4_4g31350
malus_domestica	MD13G1072300.v1.1 MD16G1072800.v1.1
prunus_persica	Prupe.1G274700_v2.0.a1
pyrus_communis	pycom13g06480 pycom16g06310
rosa_chinensis	RchiOBHm_Chr4g0439861
rosa_laevigata	RLG00000006232
rosa_multiflora	Rmu_co8191176.1_g000001 Rmu_sc0006473.1_g000005
rosa_roxburghii	Rroxscaffold_5G00380760
rosa_rugosa	Rorug04G0321800
rosa_samantha	Rh4AG372800 Rh4BG385200 Rh4CG399700 Rh4DG379400
rosa_wichuraiana	Rw4G031870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	16
AccB1I	GGYRCC	1 cut(s)	185
AccB7I	CCANNNNNTGG	1 cut(s)	91
AccII	CGCG	7 cut(s)	293, 420, 425, 441, 443, 662, 671
AccIII	TCCGGA	1 cut(s)	696
AclI	AACGTT	1 cut(s)	864
AcoI	YGGCCR	3 cut(s)	294, 307, 930
AcvI	CACGTG	1 cut(s)	604
AcyI	GRCGYC	1 cut(s)	186
AfaI	GTAC	1 cut(s)	269
AfiI	CCNNNNNNNGG	4 cut(s)	91, 182, 710, 1101
AgsI	TTSAA	2 cut(s)	208, 283
AjnI	CCWGG	1 cut(s)	750
AloI	GAACNNNNNNTCC	2 cut(s)	755, 787
AluBI	AGCT	7 cut(s)	46, 157, 512, 522, 654, 980, 984
AluI	AGCT	7 cut(s)	46, 157, 512, 522, 654, 980, 984
Alw21I	GWGCWC	2 cut(s)	159, 548
Alw26I	GTCTC	1 cut(s)	601
AlwNI	CAGNNNCTG	1 cut(s)	152
Ama87I	CYCGRG	1 cut(s)	553
Aor13HI	TCCGGA	1 cut(s)	696
AoxI	GGCC	6 cut(s)	214, 294, 307, 459, 556, 930
ApaI	GGGCCC	1 cut(s)	560
ApeKI	GCWGC	2 cut(s)	324, 396
AspLEI	GCGC	5 cut(s)	188, 386, 427, 443, 673
AspS9I	GGNCC	9 cut(s)	18, 195, 215, 460, 556, 557, 694, 738, 1104
AsuC2I	CCSGG	3 cut(s)	554, 555, 934
AsuHPI	GGTGA	5 cut(s)	341, 476, 962, 974, 1061
AsuNHI	GCTAGC	1 cut(s)	980
AvaI	CYCGRG	1 cut(s)	553
AvaII	GGWCC	5 cut(s)	18, 195, 694, 738, 1104
BaeGI	GKGCMC	1 cut(s)	560
BanI	GGYRCC	1 cut(s)	185
BanII	GRGCYC	4 cut(s)	159, 554, 560, 578
BauI	CACGAG	1 cut(s)	547
BbrPI	CACGTG	1 cut(s)	604
BbsI	GAAGAC	1 cut(s)	722
Bbv12I	GWGCWC	2 cut(s)	159, 548
BbvCI	CCTCAGC	2 cut(s)	650, 999
BbvI	GCAGC	2 cut(s)	311, 383
BccI	CCATC	1 cut(s)	137
BceAI	ACGGC	5 cut(s)	229, 273, 337, 723, 973
BciT130I	CCWGG	1 cut(s)	752
BclI	TGATCA	1 cut(s)	939
BcnI	CCSGG	3 cut(s)	554, 555, 934
BcoDI	GTCTC	1 cut(s)	601
BfaI	CTAG	2 cut(s)	791, 981
BfmI	CTRYAG	1 cut(s)	803
BfoI	RGCGCY	1 cut(s)	189
BglI	GCCNNNNNGGC	1 cut(s)	306
BlpI	GCTNAGC	1 cut(s)	513
Bme1390I	CCNGG	4 cut(s)	554, 555, 752, 934
Bme18I	GGWCC	5 cut(s)	18, 195, 694, 738, 1104
BmeT110I	CYCGRG	1 cut(s)	553
BmgT120I	GGNCC	9 cut(s)	18, 195, 215, 460, 556, 557, 694, 738, 1104
BmiI	GGNNCC	4 cut(s)	20, 187, 558, 1105
BmrFI	CCNGG	4 cut(s)	554, 555, 752, 934
BmsI	GCATC	3 cut(s)	627, 870, 955
BmtI	GCTAGC	1 cut(s)	984
BpiI	GAAGAC	1 cut(s)	722
BpmI	CTGGAG	1 cut(s)	123
Bpu10I	CCTNAGC	2 cut(s)	650, 999
Bpu1102I	GCTNAGC	1 cut(s)	513
BpuEI	CTTGAG	2 cut(s)	206, 508
BpuMI	CCSGG	3 cut(s)	554, 555, 934
BsaAI	YACGTR	1 cut(s)	604
BsaHI	GRCGYC	1 cut(s)	186
BsaI	GGTCTC	1 cut(s)	601
BsaJI	CCNNGG	2 cut(s)	301, 553
BsaWI	WCCGGW	1 cut(s)	696
Bsc4I	CCNNNNNNNGG	4 cut(s)	91, 182, 710, 1101
Bse118I	RCCGGY	2 cut(s)	592, 968
BseAI	TCCGGA	1 cut(s)	696
BseBI	CCWGG	1 cut(s)	752
BseDI	CCNNGG	2 cut(s)	301, 553
BseGI	GGATG	3 cut(s)	159, 691, 885
BseLI	CCNNNNNNNGG	4 cut(s)	91, 182, 710, 1101
BseMII	CTCAG	4 cut(s)	144, 527, 664, 990
BseRI	GAGGAG	6 cut(s)	441, 471, 632, 823, 990, 1016
BseSI	GKGCMC	1 cut(s)	560
BseX3I	CGGCCG	1 cut(s)	930
BseXI	GCAGC	2 cut(s)	311, 383
BseYI	CCCAGC	2 cut(s)	341, 710
Bsh1236I	CGCG	7 cut(s)	293, 420, 425, 441, 443, 662, 671
Bsh1285I	CGRYCG	1 cut(s)	933
BshFI	GGCC	6 cut(s)	216, 296, 309, 461, 558, 932
BshNI	GGYRCC	1 cut(s)	185
BsiEI	CGRYCG	1 cut(s)	933
BsiHKAI	GWGCWC	2 cut(s)	159, 548
BsiHKCI	CYCGRG	1 cut(s)	553
BsiSI	CCGG	6 cut(s)	541, 554, 593, 697, 933, 969
BslFI	GGGAC	1 cut(s)	4
BslI	CCNNNNNNNGG	4 cut(s)	91, 182, 710, 1101
BsmAI	GTCTC	1 cut(s)	601
BsmFI	GGGAC	1 cut(s)	4
BsnI	GGCC	6 cut(s)	216, 296, 309, 461, 558, 932
Bso31I	GGTCTC	1 cut(s)	601
BsoBI	CYCGRG	1 cut(s)	553
Bsp120I	GGGCCC	1 cut(s)	556
Bsp1286I	GDGCHC	5 cut(s)	159, 548, 554, 560, 578
Bsp13I	TCCGGA	1 cut(s)	696
Bsp143I	GATC	3 cut(s)	731, 939, 1063
Bsp1720I	GCTNAGC	1 cut(s)	513
BspANI	GGCC	6 cut(s)	216, 296, 309, 461, 558, 932
BspCNI	CTCAG	4 cut(s)	145, 526, 663, 991
BspEI	TCCGGA	1 cut(s)	696
BspFNI	CGCG	7 cut(s)	293, 420, 425, 441, 443, 662, 671
BspLI	GGNNCC	4 cut(s)	20, 187, 558, 1105
BspMAI	CTGCAG	1 cut(s)	807
BspOI	GCTAGC	1 cut(s)	984
BspT107I	GGYRCC	1 cut(s)	185
BspTNI	GGTCTC	1 cut(s)	601
BsrFI	RCCGGY	2 cut(s)	592, 968
BssAI	RCCGGY	2 cut(s)	592, 968
BssECI	CCNNGG	2 cut(s)	301, 553
BssMI	GATC	3 cut(s)	731, 939, 1063
BssNI	GRCGYC	1 cut(s)	186
BssSI	CACGAG	1 cut(s)	547
Bst2BI	CACGAG	1 cut(s)	547
Bst2UI	CCWGG	1 cut(s)	752
Bst4CI	ACNGT	2 cut(s)	681, 950
Bst6I	CTCTTC	3 cut(s)	722, 810, 1114
BstACI	GRCGYC	1 cut(s)	186
BstBAI	YACGTR	1 cut(s)	604
BstC8I	GCNNGC	6 cut(s)	298, 391, 510, 578, 970, 982
BstDEI	CTNAG	4 cut(s)	153, 513, 650, 999
BstF5I	GGATG	3 cut(s)	159, 691, 885
BstFNI	CGCG	7 cut(s)	293, 420, 425, 441, 443, 662, 671
BstH2I	RGCGCY	1 cut(s)	189
BstHHI	GCGC	5 cut(s)	188, 386, 427, 443, 673
BstKTI	GATC	3 cut(s)	734, 942, 1066
BstMAI	GTCTC	1 cut(s)	601
BstMBI	GATC	3 cut(s)	731, 939, 1063
BstMCI	CGRYCG	1 cut(s)	933
BstMWI	GCNNNNNNNGC	8 cut(s)	306, 390, 402, 514, 586, 598, 607, 668
BstNI	CCWGG	1 cut(s)	752
BstSCI	CCNGG	4 cut(s)	552, 553, 750, 932
BstSFI	CTRYAG	1 cut(s)	803
BstSLI	GKGCMC	1 cut(s)	560
BstUI	CGCG	7 cut(s)	293, 420, 425, 441, 443, 662, 671
BstV1I	GCAGC	2 cut(s)	311, 383
BstV2I	GAAGAC	1 cut(s)	722
BstZI	CGGCCG	1 cut(s)	930
BsuRI	GGCC	6 cut(s)	216, 296, 309, 461, 558, 932
BtsCI	GGATG	3 cut(s)	159, 691, 885
BtsI	GCAGTG	1 cut(s)	993
BtsIMutI	CAGTG	2 cut(s)	150, 993
Cac8I	GCNNGC	6 cut(s)	298, 391, 510, 578, 970, 982
CaiI	CAGNNNCTG	1 cut(s)	152
CfoI	GCGC	5 cut(s)	188, 386, 427, 443, 673
Cfr10I	RCCGGY	2 cut(s)	592, 968
Cfr13I	GGNCC	9 cut(s)	18, 195, 215, 460, 556, 557, 694, 738, 1104
Cfr9I	CCCGGG	1 cut(s)	553
CseI	GACGC	2 cut(s)	431, 447
Csp6I	GTAC	1 cut(s)	268
CviAII	CATG	2 cut(s)	91, 901
CviQI	GTAC	1 cut(s)	268
DdeI	CTNAG	4 cut(s)	153, 513, 650, 999
DinI	GGCGCC	1 cut(s)	187
DpnI	GATC	3 cut(s)	733, 941, 1065
DpnII	GATC	3 cut(s)	731, 939, 1063
DrdI	GACNNNNNNGTC	1 cut(s)	16
DseDI	GACNNNNNNGTC	1 cut(s)	16
EaeI	YGGCCR	3 cut(s)	294, 307, 930
EagI	CGGCCG	1 cut(s)	930
Eam1104I	CTCTTC	3 cut(s)	722, 810, 1114
EarI	CTCTTC	3 cut(s)	722, 810, 1114
EciI	GGCGGA	5 cut(s)	234, 492, 576, 646, 987
Ecl136II	GAGCTC	1 cut(s)	157
EclXI	CGGCCG	1 cut(s)	930
Eco24I	GRGCYC	4 cut(s)	159, 554, 560, 578
Eco31I	GGTCTC	1 cut(s)	601
Eco47I	GGWCC	5 cut(s)	18, 195, 694, 738, 1104
Eco52I	CGGCCG	1 cut(s)	930
Eco53kI	GAGCTC	1 cut(s)	157
Eco72I	CACGTG	1 cut(s)	604
Eco88I	CYCGRG	1 cut(s)	553
EcoICRI	GAGCTC	1 cut(s)	157
EcoO109I	RGGNCCY	4 cut(s)	18, 195, 460, 1104
EcoRII	CCWGG	1 cut(s)	750
EcoT22I	ATGCAT	1 cut(s)	885
EcoT38I	GRGCYC	4 cut(s)	159, 554, 560, 578
EgeI	GGCGCC	1 cut(s)	187
EheI	GGCGCC	1 cut(s)	187
FaeI	CATG	2 cut(s)	94, 904
FaiI	YATR	4 cut(s)	92, 255, 885, 902
FaqI	GGGAC	1 cut(s)	4
FatI	CATG	2 cut(s)	90, 900
FauI	CCCGC	2 cut(s)	367, 585
FbaI	TGATCA	1 cut(s)	939
FokI	GGATG	3 cut(s)	146, 698, 892
FriOI	GRGCYC	4 cut(s)	159, 554, 560, 578
FspBI	CTAG	2 cut(s)	791, 981
GlaI	GCGC	5 cut(s)	187, 385, 426, 442, 672
GsaI	CCCAGC	2 cut(s)	345, 714
GsuI	CTGGAG	1 cut(s)	123
HaeII	RGCGCY	1 cut(s)	189
HaeIII	GGCC	6 cut(s)	216, 296, 309, 461, 558, 932
HapII	CCGG	6 cut(s)	541, 554, 593, 697, 933, 969
HgaI	GACGC	2 cut(s)	431, 447
HhaI	GCGC	5 cut(s)	188, 386, 427, 443, 673
Hin1I	GRCGYC	1 cut(s)	186
Hin1II	CATG	2 cut(s)	94, 904
Hin6I	GCGC	5 cut(s)	186, 384, 425, 441, 671
HinP1I	GCGC	5 cut(s)	186, 384, 425, 441, 671
HinfI	GANTC	5 cut(s)	68, 75, 700, 989, 1040
HpaII	CCGG	6 cut(s)	541, 554, 593, 697, 933, 969
HphI	GGTGA	5 cut(s)	341, 476, 962, 974, 1061
Hpy166II	GTNNAC	3 cut(s)	268, 447, 666
Hpy188I	TCNGA	4 cut(s)	172, 685, 705, 861
Hpy188III	TCNNGA	4 cut(s)	72, 140, 697, 1119
Hpy8I	GTNNAC	3 cut(s)	268, 447, 666
Hpy99I	CGWCG	9 cut(s)	323, 425, 441, 685, 709, 830, 845, 931, 959
HpyAV	CCTTC	6 cut(s)	214, 473, 503, 625, 685, 754
HpyCH4III	ACNGT	2 cut(s)	681, 950
HpyCH4IV	ACGT	3 cut(s)	569, 603, 864
HpyCH4V	TGCA	2 cut(s)	805, 883
HpyF10VI	GCNNNNNNNGC	8 cut(s)	306, 390, 402, 514, 586, 598, 607, 668
HpyF3I	CTNAG	4 cut(s)	153, 513, 650, 999
HpySE526I	ACGT	3 cut(s)	569, 603, 864
Hsp92I	GRCGYC	1 cut(s)	186
Hsp92II	CATG	2 cut(s)	94, 904
HspAI	GCGC	5 cut(s)	186, 384, 425, 441, 671
KasI	GGCGCC	1 cut(s)	185
Kpn2I	TCCGGA	1 cut(s)	696
KroI	GCCGGC	1 cut(s)	968
KroNI	GCCGGC	1 cut(s)	970
Ksp22I	TGATCA	1 cut(s)	939
Kzo9I	GATC	3 cut(s)	731, 939, 1063
LmnI	GCTCC	6 cut(s)	543, 645, 659, 754, 810, 977
Lsp1109I	GCAGC	2 cut(s)	311, 383
LweI	GCATC	3 cut(s)	627, 870, 955
MaeI	CTAG	2 cut(s)	791, 981
MaeII	ACGT	3 cut(s)	569, 603, 864
MaeIII	GTNAC	1 cut(s)	950
MalI	GATC	3 cut(s)	733, 941, 1065
MboI	GATC	3 cut(s)	731, 939, 1063
MboII	GAAGA	9 cut(s)	295, 488, 610, 727, 739, 827, 919, 1101, 1104
MhlI	GDGCHC	5 cut(s)	159, 548, 554, 560, 578
MluCI	AATT	1 cut(s)	86
Mly113I	GGCGCC	1 cut(s)	186
MlyI	GAGTC	1 cut(s)	1034
MmeI	TCCRAC	5 cut(s)	378, 663, 728, 839, 1119
Mph1103I	ATGCAT	1 cut(s)	885
MroI	TCCGGA	1 cut(s)	696
MroNI	GCCGGC	1 cut(s)	968
MseI	TTAA	3 cut(s)	48, 99, 870
MspI	CCGG	6 cut(s)	541, 554, 593, 697, 933, 969
MspR9I	CCNGG	4 cut(s)	554, 555, 752, 934
MvaI	CCWGG	1 cut(s)	752
MvnI	CGCG	7 cut(s)	293, 420, 425, 441, 443, 662, 671
MwoI	GCNNNNNNNGC	8 cut(s)	306, 390, 402, 514, 586, 598, 607, 668
NaeI	GCCGGC	1 cut(s)	970
NarI	GGCGCC	1 cut(s)	186
NciI	CCSGG	3 cut(s)	554, 555, 934
NdeII	GATC	3 cut(s)	731, 939, 1063
NgoMIV	GCCGGC	1 cut(s)	968
NheI	GCTAGC	1 cut(s)	980
NlaIII	CATG	2 cut(s)	94, 904
NlaIV	GGNNCC	4 cut(s)	20, 187, 558, 1105
NmeAIII	GCCGAG	1 cut(s)	282
NmuCI	GTSAC	1 cut(s)	950
NsiI	ATGCAT	1 cut(s)	885
PcsI	WCGNNNNNNNCGW	1 cut(s)	429
PdiI	GCCGGC	1 cut(s)	970
PfeI	GAWTC	4 cut(s)	68, 75, 700, 989
PflMI	CCANNNNNTGG	1 cut(s)	91
PleI	GAGTC	1 cut(s)	1034
PluTI	GGCGCC	1 cut(s)	189
PmaCI	CACGTG	1 cut(s)	604
PmlI	CACGTG	1 cut(s)	604
PpsI	GAGTC	1 cut(s)	1034
Ppu21I	YACGTR	1 cut(s)	604
PpuMI	RGGWCCY	3 cut(s)	18, 195, 1104
Psp124BI	GAGCTC	1 cut(s)	159
Psp1406I	AACGTT	1 cut(s)	864
Psp5II	RGGWCCY	3 cut(s)	18, 195, 1104
Psp6I	CCWGG	1 cut(s)	750
PspCI	CACGTG	1 cut(s)	604
PspFI	CCCAGC	2 cut(s)	341, 710
PspGI	CCWGG	1 cut(s)	750
PspN4I	GGNNCC	4 cut(s)	20, 187, 558, 1105
PspOMI	GGGCCC	1 cut(s)	556
PspPI	GGNCC	9 cut(s)	18, 195, 215, 460, 556, 557, 694, 738, 1104
PspPPI	RGGWCCY	3 cut(s)	18, 195, 1104
PstI	CTGCAG	1 cut(s)	807
PstNI	CAGNNNCTG	1 cut(s)	152
RsaI	GTAC	1 cut(s)	269
RsaNI	GTAC	1 cut(s)	268
SacI	GAGCTC	1 cut(s)	159
SaqAI	TTAA	3 cut(s)	48, 99, 870
Sau3AI	GATC	3 cut(s)	731, 939, 1063
Sau96I	GGNCC	9 cut(s)	18, 195, 215, 460, 556, 557, 694, 738, 1104
SchI	GAGTC	1 cut(s)	1034
ScrFI	CCNGG	4 cut(s)	554, 555, 752, 934
SduI	GDGCHC	5 cut(s)	159, 548, 554, 560, 578
SfaNI	GCATC	3 cut(s)	627, 870, 955
SfcI	CTRYAG	1 cut(s)	803
SfoI	GGCGCC	1 cut(s)	187
SinI	GGWCC	5 cut(s)	18, 195, 694, 738, 1104
SmaI	CCCGGG	1 cut(s)	555
SmlI	CTYRAG	2 cut(s)	221, 523
SmoI	CTYRAG	2 cut(s)	221, 523
SrfI	GCCCGGGC	1 cut(s)	555
Sse9I	AATT	1 cut(s)	86
SspDI	GGCGCC	1 cut(s)	185
SspI	AATATT	1 cut(s)	63
SspMI	CTAG	2 cut(s)	791, 981
SstI	GAGCTC	1 cut(s)	159
StyD4I	CCNGG	4 cut(s)	552, 553, 750, 932
TaaI	ACNGT	2 cut(s)	681, 950
TaiI	ACGT	3 cut(s)	572, 606, 867
TaqI	TCGA	4 cut(s)	318, 734, 828, 1038
TasI	AATT	1 cut(s)	86
TfiI	GAWTC	4 cut(s)	68, 75, 700, 989
Tru1I	TTAA	3 cut(s)	48, 99, 870
Tru9I	TTAA	3 cut(s)	48, 99, 870
TscAI	CASTG	2 cut(s)	157, 1000
TseFI	GTSAC	1 cut(s)	950
TseI	GCWGC	2 cut(s)	324, 396
Tsp45I	GTSAC	1 cut(s)	950
TspDTI	ATGAA	3 cut(s)	79, 920, 1065
TspMI	CCCGGG	1 cut(s)	553
TspRI	CASTG	2 cut(s)	157, 1000
Van91I	CCANNNNNTGG	1 cut(s)	91
VpaK11BI	GGWCC	5 cut(s)	18, 195, 694, 738, 1104
XmaI	CCCGGG	1 cut(s)	553
XspI	CTAG	2 cut(s)	791, 981
Zsp2I	ATGCAT	1 cut(s)	885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.