No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.2G242600_v2.0.a1 Prupe.2G242700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0022311 RchiOBHm_Chr5g0022411 RchiOBHm_Chr5g0069381 RchiOBHm_Chr6g0273821 RchiOBHm_Chr6g0273841 |
| rosa_laevigata | RLG00000032572 RLG00000032658 RLG00000033466 |
| rosa_multiflora | Rmu_sc0000178.1_g000009 Rmu_sc0002658.1_g000011 Rmu_sc0005639.1_g000007 Rmu_sc0021631.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00056610 Rroxscaffold_1G00056650 Rroxscaffold_1G00056670 Rroxscaffold_3G00231410 Rroxscaffold_7G00192730 |
| rosa_rugosa | Rorug04G0081100 Rorug04G0081200 Rorug05G0073400 Rorug05G0073400 Rorug06G0097900 |
| rosa_samantha | Rh4DG183900 Rh5AG160400 Rh5BG159600 Rh5BG473000 Rh5CG173700 Rh5CG173900 Rh5CG259600 Rh5CG495600 Rh5DG160000 Rh5DG160200 Rh6AG192400 Rh6AG192500 Rh6BG196800 Rh6CG195700 Rh6CG195800 Rh6DG187800 Rh6DG188000 |
| rosa_wichuraiana | Rw0G002530 Rw5G042380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 186 |
| AciI | CCGC | 1 cut(s) | 184 |
| AclWI | GGATC | 1 cut(s) | 225 |
| AcsI | RAATTY | 1 cut(s) | 217 |
| AfaI | GTAC | 1 cut(s) | 248 |
| Alw26I | GTCTC | 1 cut(s) | 48 |
| AlwI | GGATC | 1 cut(s) | 225 |
| Ama87I | CYCGRG | 1 cut(s) | 48 |
| AoxI | GGCC | 1 cut(s) | 152 |
| ApoI | RAATTY | 1 cut(s) | 217 |
| AvaI | CYCGRG | 1 cut(s) | 48 |
| BccI | CCATC | 2 cut(s) | 144, 185 |
| BcoDI | GTCTC | 1 cut(s) | 48 |
| BfaI | CTAG | 1 cut(s) | 228 |
| BfmI | CTRYAG | 1 cut(s) | 100 |
| BglII | AGATCT | 2 cut(s) | 96, 289 |
| BmcAI | AGTACT | 1 cut(s) | 248 |
| BmeT110I | CYCGRG | 1 cut(s) | 48 |
| BmsI | GCATC | 1 cut(s) | 86 |
| BseGI | GGATG | 1 cut(s) | 273 |
| BseRI | GAGGAG | 1 cut(s) | 160 |
| Bsh1236I | CGCG | 1 cut(s) | 186 |
| Bsh1285I | CGRYCG | 1 cut(s) | 184 |
| BshFI | GGCC | 1 cut(s) | 154 |
| BsiEI | CGRYCG | 1 cut(s) | 184 |
| BsiHKCI | CYCGRG | 1 cut(s) | 48 |
| BsmAI | GTCTC | 1 cut(s) | 48 |
| BsnI | GGCC | 1 cut(s) | 154 |
| BsoBI | CYCGRG | 1 cut(s) | 48 |
| Bsp143I | GATC | 5 cut(s) | 58, 96, 195, 230, 289 |
| BspACI | CCGC | 1 cut(s) | 184 |
| BspANI | GGCC | 1 cut(s) | 154 |
| BspFNI | CGCG | 1 cut(s) | 186 |
| BspPI | GGATC | 1 cut(s) | 225 |
| BssMI | GATC | 5 cut(s) | 58, 96, 195, 230, 289 |
| Bst4CI | ACNGT | 2 cut(s) | 42, 246 |
| BstF5I | GGATG | 1 cut(s) | 273 |
| BstFNI | CGCG | 1 cut(s) | 186 |
| BstKTI | GATC | 5 cut(s) | 61, 99, 198, 233, 292 |
| BstMAI | GTCTC | 1 cut(s) | 48 |
| BstMBI | GATC | 5 cut(s) | 58, 96, 195, 230, 289 |
| BstMCI | CGRYCG | 1 cut(s) | 184 |
| BstSFI | CTRYAG | 1 cut(s) | 100 |
| BstUI | CGCG | 1 cut(s) | 186 |
| BstX2I | RGATCY | 3 cut(s) | 96, 230, 289 |
| BstYI | RGATCY | 3 cut(s) | 96, 230, 289 |
| BsuRI | GGCC | 1 cut(s) | 154 |
| BtsCI | GGATG | 1 cut(s) | 273 |
| Csp6I | GTAC | 1 cut(s) | 247 |
| CviJI | RGCY | 1 cut(s) | 154 |
| CviKI_1 | RGCY | 1 cut(s) | 154 |
| CviQI | GTAC | 1 cut(s) | 247 |
| DpnI | GATC | 5 cut(s) | 60, 98, 197, 232, 291 |
| DpnII | GATC | 5 cut(s) | 58, 96, 195, 230, 289 |
| Eco88I | CYCGRG | 1 cut(s) | 48 |
| EcoRI | GAATTC | 1 cut(s) | 217 |
| FaiI | YATR | 5 cut(s) | 24, 102, 121, 168, 257 |
| FokI | GGATG | 1 cut(s) | 260 |
| FspBI | CTAG | 1 cut(s) | 228 |
| HaeIII | GGCC | 1 cut(s) | 154 |
| HinfI | GANTC | 2 cut(s) | 113, 202 |
| Hpy166II | GTNNAC | 1 cut(s) | 239 |
| Hpy188I | TCNGA | 2 cut(s) | 58, 223 |
| Hpy188III | TCNNGA | 1 cut(s) | 199 |
| Hpy8I | GTNNAC | 1 cut(s) | 239 |
| HpyCH4III | ACNGT | 2 cut(s) | 42, 246 |
| HpyCH4V | TGCA | 5 cut(s) | 22, 77, 123, 267, 286 |
| Kzo9I | GATC | 5 cut(s) | 58, 96, 195, 230, 289 |
| LpnPI | CCDG | 3 cut(s) | 107, 247, 291 |
| LweI | GCATC | 1 cut(s) | 86 |
| MaeI | CTAG | 1 cut(s) | 228 |
| MalI | GATC | 5 cut(s) | 60, 98, 197, 232, 291 |
| MboI | GATC | 5 cut(s) | 58, 96, 195, 230, 289 |
| MboII | GAAGA | 1 cut(s) | 22 |
| MflI | RGATCY | 3 cut(s) | 96, 230, 289 |
| MluCI | AATT | 1 cut(s) | 217 |
| MnlI | CCTC | 2 cut(s) | 94, 138 |
| MvnI | CGCG | 1 cut(s) | 186 |
| NdeII | GATC | 5 cut(s) | 58, 96, 195, 230, 289 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 177 |
| PfeI | GAWTC | 2 cut(s) | 113, 202 |
| PsuI | RGATCY | 3 cut(s) | 96, 230, 289 |
| RsaI | GTAC | 1 cut(s) | 248 |
| RsaNI | GTAC | 1 cut(s) | 247 |
| Sau3AI | GATC | 5 cut(s) | 58, 96, 195, 230, 289 |
| ScaI | AGTACT | 1 cut(s) | 248 |
| SetI | ASST | 2 cut(s) | 16, 138 |
| SfaNI | GCATC | 1 cut(s) | 86 |
| SfcI | CTRYAG | 1 cut(s) | 100 |
| Sse9I | AATT | 1 cut(s) | 217 |
| SsiI | CCGC | 1 cut(s) | 184 |
| SspMI | CTAG | 1 cut(s) | 228 |
| TaaI | ACNGT | 2 cut(s) | 42, 246 |
| TaqI | TCGA | 3 cut(s) | 171, 180, 198 |
| TasI | AATT | 1 cut(s) | 217 |
| TatI | WGTACW | 1 cut(s) | 246 |
| TfiI | GAWTC | 2 cut(s) | 113, 202 |
| TspDTI | ATGAA | 3 cut(s) | 22, 105, 230 |
| XapI | RAATTY | 1 cut(s) | 217 |
| XspI | CTAG | 1 cut(s) | 228 |
| ZrmI | AGTACT | 1 cut(s) | 248 |