No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD07G1210500.v1.1 |
| rosa_laevigata | RLG00000001410 RLG00000001599 |
| rosa_multiflora | Rmu_sc0000882.1_g000040 Rmu_sc0004250.1_g000032 Rmu_sc0006065.1_g000008 Rmu_sc0019205.1_g000001 |
| rosa_samantha | Rh1BG211900 Rh2DG508000 Rh3BG313300 Rh4DG314600 Rh5AG191700 Rh5BG113800 Rh7BG380200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 155 |
| AciI | CCGC | 5 cut(s) | 117, 120, 153, 201, 213 |
| AclWI | GGATC | 2 cut(s) | 76, 89 |
| AcsI | RAATTY | 1 cut(s) | 8 |
| Alw26I | GTCTC | 1 cut(s) | 37 |
| AlwI | GGATC | 2 cut(s) | 76, 89 |
| ApoI | RAATTY | 1 cut(s) | 8 |
| AsuHPI | GGTGA | 2 cut(s) | 4, 202 |
| BamHI | GGATCC | 1 cut(s) | 81 |
| BbsI | GAAGAC | 1 cut(s) | 183 |
| BceAI | ACGGC | 1 cut(s) | 172 |
| BcoDI | GTCTC | 1 cut(s) | 37 |
| BisI | GCNGC | 3 cut(s) | 118, 121, 201 |
| BlsI | GCNGC | 3 cut(s) | 119, 122, 202 |
| BmiI | GGNNCC | 2 cut(s) | 54, 83 |
| BpiI | GAAGAC | 1 cut(s) | 183 |
| BsaI | GGTCTC | 1 cut(s) | 37 |
| BsaWI | WCCGGW | 1 cut(s) | 46 |
| Bsh1236I | CGCG | 1 cut(s) | 155 |
| BsiSI | CCGG | 1 cut(s) | 47 |
| BsmAI | GTCTC | 1 cut(s) | 37 |
| Bso31I | GGTCTC | 1 cut(s) | 37 |
| Bsp143I | GATC | 1 cut(s) | 81 |
| BspACI | CCGC | 5 cut(s) | 117, 120, 153, 201, 213 |
| BspFNI | CGCG | 1 cut(s) | 155 |
| BspLI | GGNNCC | 2 cut(s) | 54, 83 |
| BspPI | GGATC | 2 cut(s) | 76, 89 |
| BspTNI | GGTCTC | 1 cut(s) | 37 |
| BssMI | GATC | 1 cut(s) | 81 |
| BstC8I | GCNNGC | 1 cut(s) | 143 |
| BstFNI | CGCG | 1 cut(s) | 155 |
| BstKTI | GATC | 1 cut(s) | 84 |
| BstMAI | GTCTC | 1 cut(s) | 37 |
| BstMBI | GATC | 1 cut(s) | 81 |
| BstUI | CGCG | 1 cut(s) | 155 |
| BstV2I | GAAGAC | 1 cut(s) | 183 |
| BstX2I | RGATCY | 1 cut(s) | 81 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 63 |
| BstYI | RGATCY | 1 cut(s) | 81 |
| BtsIMutI | CAGTG | 1 cut(s) | 98 |
| Cac8I | GCNNGC | 1 cut(s) | 143 |
| CseI | GACGC | 1 cut(s) | 136 |
| CviAII | CATG | 1 cut(s) | 57 |
| CviJI | RGCY | 1 cut(s) | 200 |
| CviKI_1 | RGCY | 1 cut(s) | 200 |
| DpnI | GATC | 1 cut(s) | 83 |
| DpnII | GATC | 1 cut(s) | 81 |
| Eco31I | GGTCTC | 1 cut(s) | 37 |
| EcoRI | GAATTC | 1 cut(s) | 8 |
| FaeI | CATG | 1 cut(s) | 60 |
| FaiI | YATR | 3 cut(s) | 58, 171, 226 |
| FatI | CATG | 1 cut(s) | 56 |
| Fnu4HI | GCNGC | 3 cut(s) | 118, 121, 201 |
| Fsp4HI | GCNGC | 3 cut(s) | 118, 121, 201 |
| GluI | GCNGC | 3 cut(s) | 118, 121, 201 |
| HapII | CCGG | 1 cut(s) | 47 |
| HgaI | GACGC | 1 cut(s) | 136 |
| Hin1II | CATG | 1 cut(s) | 60 |
| HinfI | GANTC | 3 cut(s) | 17, 30, 136 |
| HpaII | CCGG | 1 cut(s) | 47 |
| HphI | GGTGA | 2 cut(s) | 4, 202 |
| Hpy188I | TCNGA | 2 cut(s) | 35, 81 |
| Hsp92II | CATG | 1 cut(s) | 60 |
| Kzo9I | GATC | 1 cut(s) | 81 |
| LpnPI | CCDG | 3 cut(s) | 18, 49, 60 |
| MaeIII | GTNAC | 1 cut(s) | 124 |
| MalI | GATC | 1 cut(s) | 83 |
| MboI | GATC | 1 cut(s) | 81 |
| MboII | GAAGA | 3 cut(s) | 151, 183, 199 |
| MflI | RGATCY | 1 cut(s) | 81 |
| MluCI | AATT | 2 cut(s) | 8, 22 |
| MlyI | GAGTC | 1 cut(s) | 39 |
| MnlI | CCTC | 4 cut(s) | 43, 101, 187, 226 |
| MslI | CAYNNNNRTG | 1 cut(s) | 168 |
| MspI | CCGG | 1 cut(s) | 47 |
| MvnI | CGCG | 1 cut(s) | 155 |
| NdeII | GATC | 1 cut(s) | 81 |
| NlaIII | CATG | 1 cut(s) | 60 |
| NlaIV | GGNNCC | 2 cut(s) | 54, 83 |
| NmuCI | GTSAC | 1 cut(s) | 124 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 191 |
| PfeI | GAWTC | 2 cut(s) | 17, 136 |
| PkrI | GCNGC | 3 cut(s) | 119, 122, 202 |
| PleI | GAGTC | 1 cut(s) | 38 |
| PpsI | GAGTC | 1 cut(s) | 38 |
| PspN4I | GGNNCC | 2 cut(s) | 54, 83 |
| PsuI | RGATCY | 1 cut(s) | 81 |
| RseI | CAYNNNNRTG | 1 cut(s) | 168 |
| SatI | GCNGC | 3 cut(s) | 118, 121, 201 |
| Sau3AI | GATC | 1 cut(s) | 81 |
| SchI | GAGTC | 1 cut(s) | 39 |
| SetI | ASST | 3 cut(s) | 54, 93, 179 |
| SgeI | CNNG | 9 cut(s) | 17, 59, 69, 76, 98, 136, 154, 166, 176 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 168 |
| Sse9I | AATT | 2 cut(s) | 8, 22 |
| SsiI | CCGC | 5 cut(s) | 117, 120, 153, 201, 213 |
| TaqI | TCGA | 1 cut(s) | 194 |
| TasI | AATT | 2 cut(s) | 8, 22 |
| TauI | GCSGC | 3 cut(s) | 120, 123, 203 |
| TfiI | GAWTC | 2 cut(s) | 17, 136 |
| TscAI | CASTG | 1 cut(s) | 105 |
| TseFI | GTSAC | 1 cut(s) | 124 |
| Tsp45I | GTSAC | 1 cut(s) | 124 |
| TspDTI | ATGAA | 1 cut(s) | 186 |
| TspGWI | ACGGA | 1 cut(s) | 55 |
| TspRI | CASTG | 1 cut(s) | 105 |
| XapI | RAATTY | 1 cut(s) | 8 |