Rh5AG183700

Protein unc-45 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0010186
Physical Location & Seq
Reverse (-)
20977656 .. 20980900
3245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG183700.1

Sequence Viewer

Length: 855 bp
ATGGCATCGGCGGCGCCGGCGAACAAGATCGAGCGGGCCCACCTCATGTACCGGGAAGGGAGGTACCAGGAGGCCCTGGGATTCTACACCGAAGCCCTATCCATGGCCAAGACCAAAACCCAGAAGATTGCCCTCCACAGCAATAGAGCCGCTTGCTTCCTCAAGCTTCACGATTTCAAAAAGGCTGCAGAGGAATGTACCTCAGTGCTTGAGCTTGATTACAATCACACTGGAGCATTGATGTTGCGGGCTCAGACCCTGGTGACACTAAAGGAGTACCGTTCAGCACTCTTTGATGTTAATAGGCTCATAGAGTTAAATCCATCATCCGAAGTGTATCAGAATCTTGAAGCCCGTTTAAGGACGCAAGTGTCACTGGCTCCAATACCCGAGTCCGAAGCAGAGCTAGAAGAAGAGGAAGAAGAAGAGGATGAACCAGAGCCAAATAGATATGGGGAGAGAGAAGAGCAATATATGGGAAAAGAAGATGTAGTACCTTTGAGGGAAGGAAGGGATCAGCTTGCTGAGGTTAATAGGACTACTATTGCTGATGTCATCCCACTCAAGACACCAACAAACCAGGACTCTGCTGAACAAGTAAGGGATCCAAAAGAAAACTCTTTTAAGACTATTTCCCCGGCTGAAGTTGCACCAGATAACATCAAAGTATCACCTGAAAAAGAAAAGGGATGGCAAGCAATCCCAAAACCAAAGGGACACTCTTCTCTGGATTATGGAAGGTGGGACAGTGTGGAGGATGACTCTAGCGAAGATGATGACGATGATGATGAGGAAGAGTCTCGACCACAGTATCGGTTCCGTGTAAAAACTGTTGGTGTTCGGCCGGTAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_19 TPR_8

Protein Analysis

284

Amino Acids

32.39

Weight (kDa)

4.79

Isoelectric Point (pI)

56.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 370
Acc65I GGTACC 1 cut(s) 63
AccB1I GGYRCC 2 cut(s) 13, 63
AccBSI CCGCTC 1 cut(s) 34
AciI CCGC 4 cut(s) 11, 34, 150, 247
AclWI GGATC 3 cut(s) 522, 599, 612
AcoI YGGCCR 2 cut(s) 105, 842
AcuI CTGAAG 1 cut(s) 663
AcyI GRCGYC 1 cut(s) 14
AfaI GTAC 5 cut(s) 50, 65, 199, 278, 495
AfiI CCNNNNNNNGG 2 cut(s) 103, 360
AgsI TTSAA 2 cut(s) 178, 350
AjnI CCWGG 4 cut(s) 66, 75, 258, 579
AluBI AGCT 4 cut(s) 166, 214, 406, 520
AluI AGCT 4 cut(s) 166, 214, 406, 520
Alw26I GTCTC 1 cut(s) 804
AlwI GGATC 3 cut(s) 522, 599, 612
AlwNI CAGNNNCTG 1 cut(s) 259
Ama87I CYCGRG 1 cut(s) 389
AoxI GGCC 4 cut(s) 36, 72, 105, 842
ApaI GGGCCC 1 cut(s) 40
ApeKI GCWGC 1 cut(s) 185
Asp718I GGTACC 1 cut(s) 63
AspLEI GCGC 1 cut(s) 16
AspS9I GGNCC 3 cut(s) 36, 37, 73
AsuC2I CCSGG 2 cut(s) 53, 638
AsuHPI GGTGA 2 cut(s) 274, 663
AvaI CYCGRG 1 cut(s) 389
BaeGI GKGCMC 1 cut(s) 40
BaeI ACNNNNGTAYC 2 cut(s) 794, 827
BalI TGGCCA 1 cut(s) 107
BamHI GGATCC 1 cut(s) 604
BanI GGYRCC 2 cut(s) 13, 63
BanII GRGCYC 2 cut(s) 40, 253
BarI GAAGNNNNNNTAC 2 cut(s) 477, 509
BbvCI CCTCAGC 1 cut(s) 525
BbvI GCAGC 1 cut(s) 172
BccI CCATC 2 cut(s) 331, 684
BciT130I CCWGG 4 cut(s) 68, 77, 260, 581
BcnI CCSGG 2 cut(s) 53, 638
BcoDI GTCTC 1 cut(s) 804
BfaI CTAG 2 cut(s) 407, 765
BfmI CTRYAG 1 cut(s) 186
BfoI RGCGCY 1 cut(s) 17
BisI GCNGC 3 cut(s) 12, 150, 186
BlsI GCNGC 3 cut(s) 13, 151, 187
Bme1390I CCNGG 6 cut(s) 53, 68, 77, 260, 581, 638
BmeT110I CYCGRG 1 cut(s) 389
BmgT120I GGNCC 3 cut(s) 36, 37, 73
BmiI GGNNCC 6 cut(s) 15, 38, 65, 381, 606, 818
BmrFI CCNGG 6 cut(s) 53, 68, 77, 260, 581, 638
BmsI GCATC 1 cut(s) 14
BplI GAGNNNNNCTC 2 cut(s) 746, 778
BpmI CTGGAG 1 cut(s) 252
Bpu10I CCTNAGC 1 cut(s) 525
BpuEI CTTGAG 3 cut(s) 146, 230, 548
BpuMI CCSGG 2 cut(s) 53, 638
BsaBI GATNNNNATC 1 cut(s) 222
BsaHI GRCGYC 1 cut(s) 14
BsaJI CCNNGG 5 cut(s) 75, 76, 102, 258, 636
Bsc4I CCNNNNNNNGG 2 cut(s) 103, 360
Bse118I RCCGGY 2 cut(s) 16, 844
Bse1I ACTGG 2 cut(s) 235, 381
Bse8I GATNNNNATC 1 cut(s) 222
BseBI CCWGG 4 cut(s) 68, 77, 260, 581
BseDI CCNNGG 5 cut(s) 75, 76, 102, 258, 636
BseGI GGATG 5 cut(s) 326, 436, 555, 695, 763
BseJI GATNNNNATC 1 cut(s) 222
BseLI CCNNNNNNNGG 2 cut(s) 103, 360
BseMII CTCAG 3 cut(s) 216, 266, 516
BseNI ACTGG 2 cut(s) 235, 381
BseSI GKGCMC 1 cut(s) 40
BseX3I CGGCCG 1 cut(s) 842
BseXI GCAGC 1 cut(s) 172
Bsh1285I CGRYCG 1 cut(s) 845
BshFI GGCC 4 cut(s) 38, 74, 107, 844
BshNI GGYRCC 2 cut(s) 13, 63
BsiEI CGRYCG 1 cut(s) 845
BsiHKCI CYCGRG 1 cut(s) 389
BsiSI CCGG 4 cut(s) 17, 52, 638, 845
BslFI GGGAC 2 cut(s) 729, 758
BslI CCNNNNNNNGG 2 cut(s) 103, 360
BsmAI GTCTC 1 cut(s) 804
BsmFI GGGAC 2 cut(s) 729, 758
BsnI GGCC 4 cut(s) 38, 74, 107, 844
BsoBI CYCGRG 1 cut(s) 389
Bsp120I GGGCCC 1 cut(s) 36
Bsp1286I GDGCHC 2 cut(s) 40, 253
Bsp143I GATC 3 cut(s) 27, 514, 604
Bsp19I CCATGG 1 cut(s) 102
BspACI CCGC 4 cut(s) 11, 34, 150, 247
BspANI GGCC 4 cut(s) 38, 74, 107, 844
BspCNI CTCAG 3 cut(s) 215, 265, 517
BspLI GGNNCC 6 cut(s) 15, 38, 65, 381, 606, 818
BspMAI CTGCAG 1 cut(s) 190
BspPI GGATC 3 cut(s) 522, 599, 612
BspQI GCTCTTC 1 cut(s) 459
BspT107I GGYRCC 2 cut(s) 13, 63
BsrBI CCGCTC 1 cut(s) 34
BsrFI RCCGGY 2 cut(s) 16, 844
BsrI ACTGG 2 cut(s) 235, 381
BssAI RCCGGY 2 cut(s) 16, 844
BssECI CCNNGG 5 cut(s) 75, 76, 102, 258, 636
BssMI GATC 3 cut(s) 27, 514, 604
BssNI GRCGYC 1 cut(s) 14
BssT1I CCWWGG 1 cut(s) 102
Bst2UI CCWGG 4 cut(s) 68, 77, 260, 581
Bst4CI ACNGT 4 cut(s) 281, 749, 810, 832
Bst6I CTCTTC 5 cut(s) 408, 420, 459, 727, 789
BstACI GRCGYC 1 cut(s) 14
BstC8I GCNNGC 6 cut(s) 18, 36, 154, 249, 522, 696
BstDEI CTNAG 3 cut(s) 202, 252, 525
BstDSI CCRYGG 1 cut(s) 102
BstF5I GGATG 5 cut(s) 326, 436, 555, 695, 763
BstH2I RGCGCY 1 cut(s) 17
BstHHI GCGC 1 cut(s) 16
BstKTI GATC 3 cut(s) 30, 517, 607
BstMAI GTCTC 1 cut(s) 804
BstMBI GATC 3 cut(s) 27, 514, 604
BstMCI CGRYCG 1 cut(s) 845
BstMWI GCNNNNNNNGC 3 cut(s) 11, 17, 647
BstNI CCWGG 4 cut(s) 68, 77, 260, 581
BstSCI CCNGG 6 cut(s) 51, 66, 75, 258, 579, 636
BstSFI CTRYAG 1 cut(s) 186
BstSLI GKGCMC 1 cut(s) 40
BstV1I GCAGC 1 cut(s) 172
BstX2I RGATCY 1 cut(s) 604
BstYI RGATCY 1 cut(s) 604
BstZI CGGCCG 1 cut(s) 842
BsuRI GGCC 4 cut(s) 38, 74, 107, 844
BtgI CCRYGG 1 cut(s) 102
BtsCI GGATG 5 cut(s) 326, 436, 555, 695, 763
BtsIMutI CAGTG 4 cut(s) 210, 228, 374, 754
Cac8I GCNNGC 6 cut(s) 18, 36, 154, 249, 522, 696
CaiI CAGNNNCTG 1 cut(s) 259
CfoI GCGC 1 cut(s) 16
Cfr10I RCCGGY 2 cut(s) 16, 844
Cfr13I GGNCC 3 cut(s) 36, 37, 73
CseI GACGC 1 cut(s) 373
Csp6I GTAC 5 cut(s) 49, 64, 198, 277, 494
CviAII CATG 2 cut(s) 46, 103
CviQI GTAC 5 cut(s) 49, 64, 198, 277, 494
DdeI CTNAG 3 cut(s) 202, 252, 525
DinI GGCGCC 1 cut(s) 15
DpnI GATC 3 cut(s) 29, 516, 606
DpnII GATC 3 cut(s) 27, 514, 604
DrdI GACNNNNNNGTC 1 cut(s) 370
DseDI GACNNNNNNGTC 1 cut(s) 370
EaeI YGGCCR 2 cut(s) 105, 842
EagI CGGCCG 1 cut(s) 842
Eam1104I CTCTTC 5 cut(s) 408, 420, 459, 727, 789
EarI CTCTTC 5 cut(s) 408, 420, 459, 727, 789
EclXI CGGCCG 1 cut(s) 842
Eco130I CCWWGG 1 cut(s) 102
Eco24I GRGCYC 2 cut(s) 40, 253
Eco52I CGGCCG 1 cut(s) 842
Eco57I CTGAAG 1 cut(s) 663
Eco88I CYCGRG 1 cut(s) 389
EcoO109I RGGNCCY 1 cut(s) 73
EcoRII CCWGG 4 cut(s) 66, 75, 258, 579
EcoT14I CCWWGG 1 cut(s) 102
EcoT38I GRGCYC 2 cut(s) 40, 253
EgeI GGCGCC 1 cut(s) 15
EheI GGCGCC 1 cut(s) 15
ErhI CCWWGG 1 cut(s) 102
FaeI CATG 2 cut(s) 49, 106
FaiI YATR 7 cut(s) 47, 104, 311, 453, 474, 476, 735
FaqI GGGAC 2 cut(s) 729, 758
FatI CATG 2 cut(s) 45, 102
FauI CCCGC 2 cut(s) 27, 240
Fnu4HI GCNGC 3 cut(s) 12, 150, 186
FokI GGATG 5 cut(s) 313, 443, 542, 702, 770
FriOI GRGCYC 2 cut(s) 40, 253
Fsp4HI GCNGC 3 cut(s) 12, 150, 186
FspBI CTAG 2 cut(s) 407, 765
GlaI GCGC 1 cut(s) 15
GluI GCNGC 3 cut(s) 12, 150, 186
GsuI CTGGAG 1 cut(s) 252
HaeII RGCGCY 1 cut(s) 17
HaeIII GGCC 4 cut(s) 38, 74, 107, 844
HapII CCGG 4 cut(s) 17, 52, 638, 845
HgaI GACGC 1 cut(s) 373
HhaI GCGC 1 cut(s) 16
Hin1I GRCGYC 1 cut(s) 14
Hin1II CATG 2 cut(s) 49, 106
Hin6I GCGC 1 cut(s) 14
HinP1I GCGC 1 cut(s) 14
HindIII AAGCTT 1 cut(s) 164
HinfI GANTC 6 cut(s) 81, 343, 392, 584, 761, 797
HpaII CCGG 4 cut(s) 17, 52, 638, 845
HphI GGTGA 2 cut(s) 274, 663
Hpy188I TCNGA 4 cut(s) 255, 331, 342, 397
Hpy188III TCNNGA 5 cut(s) 170, 347, 565, 728, 801
HpyAV CCTTC 4 cut(s) 50, 500, 504, 732
HpyCH4III ACNGT 4 cut(s) 281, 749, 810, 832
HpyCH4V TGCA 2 cut(s) 188, 650
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 17, 647
HpyF3I CTNAG 3 cut(s) 202, 252, 525
Hsp92I GRCGYC 1 cut(s) 14
Hsp92II CATG 2 cut(s) 49, 106
HspAI GCGC 1 cut(s) 14
KasI GGCGCC 1 cut(s) 13
KpnI GGTACC 1 cut(s) 67
KroI GCCGGC 1 cut(s) 16
KroNI GCCGGC 1 cut(s) 18
Kzo9I GATC 3 cut(s) 27, 514, 604
LguI GCTCTTC 1 cut(s) 459
LmnI GCTCC 2 cut(s) 233, 385
Lsp1109I GCAGC 1 cut(s) 172
LweI GCATC 1 cut(s) 14
MaeI CTAG 2 cut(s) 407, 765
MaeIII GTNAC 2 cut(s) 262, 372
MalI GATC 3 cut(s) 29, 516, 606
MbiI CCGCTC 1 cut(s) 34
MboI GATC 3 cut(s) 27, 514, 604
MflI RGATCY 1 cut(s) 604
MhlI GDGCHC 2 cut(s) 40, 253
MlsI TGGCCA 1 cut(s) 107
MluNI TGGCCA 1 cut(s) 107
Mly113I GGCGCC 1 cut(s) 14
MlyI GAGTC 4 cut(s) 401, 578, 755, 806
Mox20I TGGCCA 1 cut(s) 107
MreI CGCCGGCG 1 cut(s) 16
MroNI GCCGGC 1 cut(s) 16
MscI TGGCCA 1 cut(s) 107
MseI TTAA 5 cut(s) 300, 317, 359, 531, 624
Msp20I TGGCCA 1 cut(s) 107
MspI CCGG 4 cut(s) 17, 52, 638, 845
MspR9I CCNGG 6 cut(s) 53, 68, 77, 260, 581, 638
MvaI CCWGG 4 cut(s) 68, 77, 260, 581
MwoI GCNNNNNNNGC 3 cut(s) 11, 17, 647
NaeI GCCGGC 1 cut(s) 18
NarI GGCGCC 1 cut(s) 14
NciI CCSGG 2 cut(s) 53, 638
NcoI CCATGG 1 cut(s) 102
NdeII GATC 3 cut(s) 27, 514, 604
NgoMIV GCCGGC 1 cut(s) 16
NlaIII CATG 2 cut(s) 49, 106
NlaIV GGNNCC 6 cut(s) 15, 38, 65, 381, 606, 818
NmuCI GTSAC 2 cut(s) 262, 372
PasI CCCWGGG 1 cut(s) 76
PciSI GCTCTTC 1 cut(s) 459
PdiI GCCGGC 1 cut(s) 18
PfeI GAWTC 2 cut(s) 81, 343
PkrI GCNGC 3 cut(s) 13, 151, 187
PleI GAGTC 4 cut(s) 400, 578, 755, 805
PluTI GGCGCC 1 cut(s) 17
PpsI GAGTC 4 cut(s) 400, 578, 755, 805
Psp6I CCWGG 4 cut(s) 66, 75, 258, 579
PspGI CCWGG 4 cut(s) 66, 75, 258, 579
PspN4I GGNNCC 6 cut(s) 15, 38, 65, 381, 606, 818
PspOMI GGGCCC 1 cut(s) 36
PspPI GGNCC 3 cut(s) 36, 37, 73
PstI CTGCAG 1 cut(s) 190
PstNI CAGNNNCTG 1 cut(s) 259
PsuI RGATCY 1 cut(s) 604
RsaI GTAC 5 cut(s) 50, 65, 199, 278, 495
RsaNI GTAC 5 cut(s) 49, 64, 198, 277, 494
SapI GCTCTTC 1 cut(s) 459
SaqAI TTAA 5 cut(s) 300, 317, 359, 531, 624
SatI GCNGC 3 cut(s) 12, 150, 186
Sau3AI GATC 3 cut(s) 27, 514, 604
Sau96I GGNCC 3 cut(s) 36, 37, 73
SchI GAGTC 4 cut(s) 401, 578, 755, 806
ScrFI CCNGG 6 cut(s) 53, 68, 77, 260, 581, 638
SduI GDGCHC 2 cut(s) 40, 253
SfaNI GCATC 1 cut(s) 14
SfcI CTRYAG 1 cut(s) 186
SfoI GGCGCC 1 cut(s) 15
SgrAI CRCCGGYG 1 cut(s) 16
SmlI CTYRAG 3 cut(s) 161, 209, 563
SmoI CTYRAG 3 cut(s) 161, 209, 563
SsiI CCGC 4 cut(s) 11, 34, 150, 247
SspDI GGCGCC 1 cut(s) 13
SspMI CTAG 2 cut(s) 407, 765
StyD4I CCNGG 6 cut(s) 51, 66, 75, 258, 579, 636
StyI CCWWGG 1 cut(s) 102
TaaI ACNGT 4 cut(s) 281, 749, 810, 832
TaqI TCGA 2 cut(s) 30, 802
TauI GCSGC 2 cut(s) 14, 152
TfiI GAWTC 2 cut(s) 81, 343
Tru1I TTAA 5 cut(s) 300, 317, 359, 531, 624
Tru9I TTAA 5 cut(s) 300, 317, 359, 531, 624
TscAI CASTG 4 cut(s) 210, 235, 381, 754
TseFI GTSAC 2 cut(s) 262, 372
TseI GCWGC 1 cut(s) 185
Tsp45I GTSAC 2 cut(s) 262, 372
TspDTI ATGAA 1 cut(s) 447
TspGWI ACGGA 1 cut(s) 809
TspRI CASTG 4 cut(s) 210, 235, 381, 754
XspI CTAG 2 cut(s) 407, 765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.