Rh5AG444200

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
76173748 .. 76178169
4422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG444200.1

Sequence Viewer

Length: 210 bp
ATGGTGAAGAAAATGTGGGTGGTGTGTGTGGTGGTTTTGGCATTGAACTTTGGGGATCCTTTGGTTGATAATGGCAAAATAAACCAGCTTCAGTCCTTGGCAAGAGCTGATTACTTGCCTTATGGGATCGACTTCGGAGGACCAACTGGAAGATTTTCCAATGGGAAAACTGTTGTTGATGCTGTTGAGGATCTTTTGCACAACCCCTAA

Protein Analysis

69

Amino Acids

7.52

Weight (kDa)

5.52

Isoelectric Point (pI)

11.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 4 cut(s) 50, 63, 134, 198
AcuI CTGAAG 1 cut(s) 74
AgsI TTSAA 1 cut(s) 46
AluBI AGCT 2 cut(s) 88, 107
AluI AGCT 2 cut(s) 88, 107
AlwI GGATC 4 cut(s) 50, 63, 134, 198
Asp700I GAANNNNTTC 1 cut(s) 154
AspS9I GGNCC 1 cut(s) 140
AsuHPI GGTGA 1 cut(s) 16
AvaII GGWCC 1 cut(s) 140
BamHI GGATCC 1 cut(s) 55
Bme18I GGWCC 1 cut(s) 140
BmgT120I GGNCC 1 cut(s) 140
BmiI GGNNCC 1 cut(s) 57
BmsI GCATC 1 cut(s) 169
BsaJI CCNNGG 1 cut(s) 96
Bse1I ACTGG 1 cut(s) 151
BseDI CCNNGG 1 cut(s) 96
BseNI ACTGG 1 cut(s) 151
Bsp143I GATC 3 cut(s) 55, 126, 190
BspLI GGNNCC 1 cut(s) 57
BspPI GGATC 4 cut(s) 50, 63, 134, 198
BsrI ACTGG 1 cut(s) 151
BssECI CCNNGG 1 cut(s) 96
BssMI GATC 3 cut(s) 55, 126, 190
BssT1I CCWWGG 1 cut(s) 96
Bst4CI ACNGT 1 cut(s) 172
BstKTI GATC 3 cut(s) 58, 129, 193
BstMBI GATC 3 cut(s) 55, 126, 190
BstX2I RGATCY 2 cut(s) 55, 190
BstYI RGATCY 2 cut(s) 55, 190
Cfr13I GGNCC 1 cut(s) 140
CviJI RGCY 2 cut(s) 88, 107
CviKI_1 RGCY 2 cut(s) 88, 107
DpnI GATC 3 cut(s) 57, 128, 192
DpnII GATC 3 cut(s) 55, 126, 190
Eco130I CCWWGG 1 cut(s) 96
Eco47I GGWCC 1 cut(s) 140
Eco57I CTGAAG 1 cut(s) 74
EcoT14I CCWWGG 1 cut(s) 96
ErhI CCWWGG 1 cut(s) 96
FaiI YATR 1 cut(s) 123
HphI GGTGA 1 cut(s) 16
Hpy188I TCNGA 1 cut(s) 137
HpyCH4III ACNGT 1 cut(s) 172
HpyCH4V TGCA 1 cut(s) 199
Kzo9I GATC 3 cut(s) 55, 126, 190
LpnPI CCDG 2 cut(s) 98, 132
LweI GCATC 1 cut(s) 169
MalI GATC 3 cut(s) 57, 128, 192
MboI GATC 3 cut(s) 55, 126, 190
MboII GAAGA 2 cut(s) 19, 162
MflI RGATCY 2 cut(s) 55, 190
MnlI CCTC 2 cut(s) 131, 181
MroXI GAANNNNTTC 1 cut(s) 154
NdeII GATC 3 cut(s) 55, 126, 190
NlaIV GGNNCC 1 cut(s) 57
PdmI GAANNNNTTC 1 cut(s) 154
PspN4I GGNNCC 1 cut(s) 57
PspPI GGNCC 1 cut(s) 140
PsuI RGATCY 2 cut(s) 55, 190
Sau3AI GATC 3 cut(s) 55, 126, 190
Sau96I GGNCC 1 cut(s) 140
SetI ASST 2 cut(s) 90, 109
SfaNI GCATC 1 cut(s) 169
SgeI CNNG 5 cut(s) 97, 109, 114, 127, 159
SinI GGWCC 1 cut(s) 140
StyI CCWWGG 1 cut(s) 96
TaaI ACNGT 1 cut(s) 172
TaqI TCGA 1 cut(s) 129
VpaK11BI GGWCC 1 cut(s) 140
XmnI GAANNNNTTC 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.