Rh6CG423800

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
60641664 .. 60645751
4088 bp
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UTR
Exon/CDS
Intron
Rh6CG423800.1

Sequence Viewer

Length: 348 bp
ATGGTGAAGAAAATGTGGGTGGTGTGTGTGGTGGTTTTGGTCTTGAACTTTGGGGATCCTTTGGTTGATAATGGCAAAATAAACCAGCTTCAGTCCTTGGCAAGAGCTGATTACTTGCCTTATGGGATCGACTTCGGCGGACCAACTGGAAGATTTTCCAATGGGAAAACTGTTGTTGATGCTGTTGGCTCCGTCCAGTCCGACCACGGTGAGGTTGTGTTCTGCAATCGCAAAGAAAAACTCGGCATCGATGTTAGCATTCACCAAGCGAAGAAGATACGTCTTGCCATAATCCACCTTACGACGCCATGTTGTATCTGCACAAGAGCATGGAATGTGCTTATATAA

Protein Analysis

115

Amino Acids

12.62

Weight (kDa)

8.91

Isoelectric Point (pI)

12.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 138
AclWI GGATC 3 cut(s) 50, 63, 134
AcuI CTGAAG 1 cut(s) 74
AcyI GRCGYC 1 cut(s) 305
AfiI CCNNNNNNNGG 1 cut(s) 211
AgsI TTSAA 1 cut(s) 46
AluBI AGCT 2 cut(s) 88, 107
AluI AGCT 2 cut(s) 88, 107
AlwI GGATC 3 cut(s) 50, 63, 134
Asp700I GAANNNNTTC 1 cut(s) 154
AspS9I GGNCC 1 cut(s) 140
AsuHPI GGTGA 3 cut(s) 16, 221, 254
AvaII GGWCC 1 cut(s) 140
BamHI GGATCC 1 cut(s) 55
Bme18I GGWCC 1 cut(s) 140
BmgT120I GGNCC 1 cut(s) 140
BmiI GGNNCC 2 cut(s) 57, 190
BmsI GCATC 2 cut(s) 169, 255
Bsa29I ATCGAT 1 cut(s) 249
BsaHI GRCGYC 1 cut(s) 305
BsaJI CCNNGG 2 cut(s) 96, 205
Bsc4I CCNNNNNNNGG 1 cut(s) 211
Bse1I ACTGG 2 cut(s) 151, 196
BseCI ATCGAT 1 cut(s) 249
BseDI CCNNGG 2 cut(s) 96, 205
BseLI CCNNNNNNNGG 1 cut(s) 211
BseNI ACTGG 2 cut(s) 151, 196
BsgI GTGCAG 1 cut(s) 304
BshVI ATCGAT 1 cut(s) 249
BslI CCNNNNNNNGG 1 cut(s) 211
BsmI GAATGC 1 cut(s) 258
Bsp143I GATC 2 cut(s) 55, 126
BspACI CCGC 1 cut(s) 138
BspDI ATCGAT 1 cut(s) 249
BspLI GGNNCC 2 cut(s) 57, 190
BspPI GGATC 3 cut(s) 50, 63, 134
BsrI ACTGG 2 cut(s) 151, 196
BssECI CCNNGG 2 cut(s) 96, 205
BssMI GATC 2 cut(s) 55, 126
BssNI GRCGYC 1 cut(s) 305
BssT1I CCWWGG 1 cut(s) 96
Bst4CI ACNGT 2 cut(s) 172, 209
BstACI GRCGYC 1 cut(s) 305
BstDSI CCRYGG 1 cut(s) 205
BstKTI GATC 2 cut(s) 58, 129
BstMBI GATC 2 cut(s) 55, 126
BstX2I RGATCY 1 cut(s) 55
BstYI RGATCY 1 cut(s) 55
Bsu15I ATCGAT 1 cut(s) 249
BsuTUI ATCGAT 1 cut(s) 249
BtgI CCRYGG 1 cut(s) 205
Cfr13I GGNCC 1 cut(s) 140
ClaI ATCGAT 1 cut(s) 249
CseI GACGC 1 cut(s) 313
CviAII CATG 2 cut(s) 309, 330
CviJI RGCY 3 cut(s) 88, 107, 189
CviKI_1 RGCY 3 cut(s) 88, 107, 189
DpnI GATC 2 cut(s) 57, 128
DpnII GATC 2 cut(s) 55, 126
EciI GGCGGA 1 cut(s) 153
Eco130I CCWWGG 1 cut(s) 96
Eco47I GGWCC 1 cut(s) 140
Eco57I CTGAAG 1 cut(s) 74
EcoT14I CCWWGG 1 cut(s) 96
ErhI CCWWGG 1 cut(s) 96
FaeI CATG 2 cut(s) 312, 333
FaiI YATR 6 cut(s) 123, 290, 310, 331, 344, 346
FatI CATG 2 cut(s) 308, 329
HgaI GACGC 1 cut(s) 313
Hin1I GRCGYC 1 cut(s) 305
Hin1II CATG 2 cut(s) 312, 333
HphI GGTGA 3 cut(s) 16, 221, 254
Hpy188I TCNGA 1 cut(s) 202
Hpy188III TCNNGA 1 cut(s) 43
Hpy99I CGWCG 1 cut(s) 307
HpyCH4III ACNGT 2 cut(s) 172, 209
HpyCH4IV ACGT 1 cut(s) 280
HpyCH4V TGCA 2 cut(s) 225, 321
HpySE526I ACGT 1 cut(s) 280
Hsp92I GRCGYC 1 cut(s) 305
Hsp92II CATG 2 cut(s) 312, 333
Kzo9I GATC 2 cut(s) 55, 126
LmnI GCTCC 1 cut(s) 194
LpnPI CCDG 3 cut(s) 98, 132, 209
LweI GCATC 2 cut(s) 169, 255
MaeII ACGT 1 cut(s) 280
MalI GATC 2 cut(s) 57, 128
MboI GATC 2 cut(s) 55, 126
MboII GAAGA 4 cut(s) 19, 162, 283, 286
MflI RGATCY 1 cut(s) 55
MmeI TCCRAC 1 cut(s) 225
MnlI CCTC 1 cut(s) 205
MroXI GAANNNNTTC 1 cut(s) 154
Mva1269I GAATGC 1 cut(s) 258
NdeII GATC 2 cut(s) 55, 126
NlaIII CATG 2 cut(s) 312, 333
NlaIV GGNNCC 2 cut(s) 57, 190
NmeAIII GCCGAG 1 cut(s) 222
PctI GAATGC 1 cut(s) 258
PdmI GAANNNNTTC 1 cut(s) 154
PspN4I GGNNCC 2 cut(s) 57, 190
PspPI GGNCC 1 cut(s) 140
PsuI RGATCY 1 cut(s) 55
Sau3AI GATC 2 cut(s) 55, 126
Sau96I GGNCC 1 cut(s) 140
SetI ASST 5 cut(s) 90, 109, 216, 283, 300
SfaNI GCATC 2 cut(s) 169, 255
SinI GGWCC 1 cut(s) 140
SsiI CCGC 1 cut(s) 138
StyI CCWWGG 1 cut(s) 96
TaaI ACNGT 2 cut(s) 172, 209
TaiI ACGT 1 cut(s) 283
TaqI TCGA 2 cut(s) 129, 249
TspGWI ACGGA 1 cut(s) 181
VpaK11BI GGWCC 1 cut(s) 140
XmnI GAANNNNTTC 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.