Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0009357

Physical Location & Seq

Genomic Coordinates Forward (+)

27676829 .. 27679469

Gene Structure 2641 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG233200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGACCGGGTCCGCGACCACGGCTACGACAACTACATGGAAATCGAGAAGAAGATCCGCAAAGTCCTCAAATTCCAGGCCCTCATTCTCTCCCATCCCCACCAGATCATCCAAGCCTCTCGCCTCGACATGCTCGCCCGCCGCCTCGGCTTCAAGCAGCACGAGGCCGCCGCCTTCGTCCTCAAGTTCCCTCACGTCTTCGAGATTTACGAGCACCCGGTTCAGCGGGTCCTCTATTGCCGGCTGACCCGAAAAGCCCACCTCCAAATCGAGCAGGAGAAGCGGGCCCTGGCGGCCCAGGTCCCCGACGCCGTGACCCGGCTCAGGAAGCTGGTGATGATGTCCAATACGGGTCGGATCCGGCTCGAGCATGTTCGGATTGCCAGGTATGAATTCGGGCTACCCGATGATTTCGAATACTCGGTAGTTCTCAAGTACCCTGAGTATTTCAGATTGTTTGATGCTGATGAGAGTAGGAGTAAGTTCATTGAGGTAGTTGAGAAGGACCCAAGTTTAGCTGTTTGTGCTATAGAGAAGCTTAGGGAGAGAGAATATAGGGAGAAGGGGGTTGATGCTGAGGATATAAGGTTTTCATTCATTGTGAATTTTCCGCCGGGGTTTAAGATAGGGAAGTATTATAGGATTGCGGTGTGGAAATGGCAGAGAGTGCCGTATTGGAGTCCTTATGAGGATGTTTCGGGGTATGACATGAGGTCGCTTGAGGCGCAGAAGAGGATGGAGAAGAGGGCCGTGGCGGTGATTCATGAGCTGTTGAATTTGACCGTGGAGAAGAAGATTACGTTGGAGAGGATTGCGCATTTTAGAATGGCGATGAATCTGCCGAAGAAGTTGAAGGAGTTTCTTCTGCAGCATCAGGGGATTTTCTACATTTCGACTAGAGGGAATCACGGGAAGCTTCATACGGTGTTTCTTAGGGAGGCTTATAGGAAGGGTGAGTTGGTAGAGCCGAATGATTTGTATTTGGCGAGAAGAAAGTTGGCTGAGTTGGTGTTGATGAGCCCAAGGAAGGCGAAAATGGATAGTGAATTGGTTAGTTACCATAGAGACTGGGGAGATGATGAGAGGGGGTTCGTTGGAAGAGAATGTGTTGAGAATGCTTTTGAAGATTTTGGGGGTTGCAATGATGATAGGCAGAGGAGGGACTCGAATGCGAGTGATGATTATGACTCTGATACAGACGATGATTCTGATAAAACTCTGGATGAAAAGGATGAGATTGAAGTGAGGGAGACTTTGATCACCATTTTGCAGGCCAAGGTTTTGAGATTGAAGGCAGCAGTCACAAGAAAAAGCCACAACGAGGTTGTTTTGGGTTTTCTTTCTAGAGGTGGATTGCCGCTGTCCAGAGGGAATGCGAGTCCCTGGCTTTCCTCATGTCCTTTAAAAAATGAAGTTCCTAGAGGGTTAAGTAGGAATTCAAAGAAAAGCATGCTAAGGCTGGCACAGTGTATGATGCAAAGATTTAGTAGGGGGGTTTGTGGCTCATCAGTGTACCCATGGGACAAACTCTGTATTGATAATTTTAGTGACAATATGAGGGTTATGGTGCATCAAAGTTTGGTGGCCGGTAAGCCATCTGGTTTCGTGTTGAGTGCTGCAACATCTGTTCGGATGCCAGTGTCAAGGTCAGCTGCCATCCATTGCAAGCCATGGTACAGATTGACAAGGATCACGGATGTTGCAAACATTGATTCTCTCTTTAATGCCAAGTGTCTTGATGTCAATAACAATTATTACATGCTGATGTTCCAAGAGACGAGGACGGACGCTTCAGGGTCAGCAGTTGTGTATGCACTGATTACTTCAACAAGTTCGGATATCATGATGGATGCTGTGTACGAGGGTGGTGATTCTGCTTATGTAAATCTTTTACCATCAGGATTTGCAATCCTTCCTTGTGGTACATCTGACTATGCCAAAGGCGAAGGAGATGGTTCTGATGACGGTGAATGTCTGCTAACAGTTGGATTCCGAATCGTGTGTGATGGTGGCCAACCGACTTCCAAGCTCACTATGCTGTCGGTTAAGGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0007275 GO:0008150 GO:0008285 GO:0009653 GO:0009791 GO:0010015 GO:0010101 GO:0010102 GO:0022622 GO:0032501 GO:0032502 GO:0042127 GO:0048364 GO:0048519 GO:0048523 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0065007 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PORR

Protein Analysis

684

Amino Acids

78.39

Weight (kDa)

8.65

Isoelectric Point (pI)

38.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PORR	PF11955	4 - 341	3.8e-112	Plant organelle RNA recognition domain
PDF2_C	PF25797	479 - 550	7.8e-13	PDF2-like, C-terminal domain
PDF2_C	PF25797	582 - 683	1.3e-20	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33495
fragaria_vesca	FvH4_3g19980 FvH4_3g19980 FvH4_3g19980 FvH4_3g19980 FvH4_3g19980 FvH4_3g19980
malus_domestica	MD01G1198200.v1.1 MD07G1266100.v1.1
prunus_persica	Prupe.2G291500_v2.0.a1
pyrus_communis	pycom01g20830
rosa_chinensis	RchiOBHm_Chr5g0033651
rosa_laevigata	RLG00000033496
rosa_multiflora	Rmu_co8282813.1_g000001 Rmu_sc0001768.1_g000027
rosa_roxburghii	Rroxscaffold_1G00046440
rosa_rugosa	Rorug05G0141500
rosa_samantha	Rh5AG232600 Rh5BG233200 Rh5CG262100 Rh5DG238900
rosa_wichuraiana	Rw5G021610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	816
AccII	CGCG	1 cut(s)	15
AclWI	GGATC	4 cut(s)	49, 352, 365, 1697
AcoI	YGGCCR	2 cut(s)	1584, 2011
AcsI	RAATTY	5 cut(s)	71, 392, 604, 775, 1435
AcuI	CTGAAG	1 cut(s)	1776
AcyI	GRCGYC	1 cut(s)	309
AfaI	GTAC	5 cut(s)	437, 1514, 1676, 1859, 1924
AfiI	CCNNNNNNNGG	4 cut(s)	318, 324, 1027, 1321
AgsI	TTSAA	8 cut(s)	154, 775, 853, 1124, 1241, 1291, 1440, 1827
AhdI	GACNNNNNGTC	1 cut(s)	712
AjiI	CACGTC	1 cut(s)	196
AjnI	CCWGG	5 cut(s)	75, 288, 297, 383, 1382
AjuI	GAANNNNNNNTTGG	4 cut(s)	785, 817, 941, 973
AluBI	AGCT	7 cut(s)	331, 518, 538, 769, 916, 1652, 2029
AluI	AGCT	7 cut(s)	331, 518, 538, 769, 916, 1652, 2029
Alw21I	GWGCWC	1 cut(s)	216
Alw26I	GTCTC	3 cut(s)	1059, 1244, 1769
AlwI	GGATC	4 cut(s)	49, 352, 365, 1697
Ama87I	CYCGRG	1 cut(s)	365
AoxI	GGCC	8 cut(s)	78, 165, 285, 294, 747, 1272, 1584, 2011
ApaI	GGGCCC	1 cut(s)	289
ApeKI	GCWGC	5 cut(s)	157, 868, 1295, 1616, 1652
ApoI	RAATTY	5 cut(s)	71, 392, 604, 775, 1435
AspLEI	GCGC	2 cut(s)	727, 817
AsuC2I	CCSGG	4 cut(s)	8, 218, 319, 615
AsuHPI	GGTGA	6 cut(s)	346, 769, 965, 1252, 1880, 1979
AsuII	TTCGAA	1 cut(s)	414
AvaI	CYCGRG	1 cut(s)	365
AvaII	GGWCC	5 cut(s)	4, 10, 229, 301, 505
BaeGI	GKGCMC	1 cut(s)	289
BalI	TGGCCA	1 cut(s)	2013
BamHI	GGATCC	1 cut(s)	357
BanII	GRGCYC	2 cut(s)	289, 1022
BauI	CACGAG	1 cut(s)	161
BbsI	GAAGAC	1 cut(s)	190
Bbv12I	GWGCWC	1 cut(s)	216
BbvCI	CCTCAGC	1 cut(s)	576
BbvI	GCAGC	5 cut(s)	169, 880, 1307, 1603, 1639
BccI	CCATC	8 cut(s)	102, 730, 1603, 1664, 1840, 1903, 1946, 2000
BceAI	ACGGC	4 cut(s)	37, 296, 655, 734
BcgI	CGANNNNNNTGC	2 cut(s)	820, 854
BciT130I	CCWGG	5 cut(s)	77, 290, 299, 385, 1384
BclI	TGATCA	1 cut(s)	1257
BcnI	CCSGG	4 cut(s)	8, 218, 319, 615
BcoDI	GTCTC	3 cut(s)	1059, 1244, 1769
BfaI	CTAG	3 cut(s)	897, 1344, 1419
BfmI	CTRYAG	2 cut(s)	528, 866
BglI	GCCNNNNNGGC	2 cut(s)	147, 293
Bme1390I	CCNGG	9 cut(s)	8, 77, 218, 290, 299, 319, 385, 615, 1384
Bme18I	GGWCC	5 cut(s)	4, 10, 229, 301, 505
BmeRI	GACNNNNNGTC	1 cut(s)	712
BmeT110I	CYCGRG	1 cut(s)	365
BmgBI	CACGTC	1 cut(s)	196
BmiI	GGNNCC	6 cut(s)	11, 230, 287, 303, 359, 507
BmrFI	CCNGG	9 cut(s)	8, 77, 218, 290, 299, 319, 385, 615, 1384
BmrI	ACTGGG	1 cut(s)	1078
BmsI	GCATC	7 cut(s)	451, 562, 880, 1464, 1579, 1623, 1840
BmuI	ACTGGG	1 cut(s)	1078
BpiI	GAAGAC	1 cut(s)	190
Bpu10I	CCTNAGC	4 cut(s)	323, 539, 576, 1454
Bpu14I	TTCGAA	1 cut(s)	414
BpuEI	CTTGAG	3 cut(s)	167, 416, 740
BpuMI	CCSGG	4 cut(s)	8, 218, 319, 615
BsaHI	GRCGYC	1 cut(s)	309
Bsc4I	CCNNNNNNNGG	4 cut(s)	318, 324, 1027, 1321
Bse118I	RCCGGY	2 cut(s)	240, 1586
Bse1I	ACTGG	2 cut(s)	1073, 1637
Bse3DI	GCAATG	2 cut(s)	1147, 1660
BseBI	CCWGG	5 cut(s)	77, 290, 299, 385, 1384
BseLI	CCNNNNNNNGG	4 cut(s)	318, 324, 1027, 1321
BseMI	GCAATG	2 cut(s)	1147, 1660
BseMII	CTCAG	4 cut(s)	337, 432, 567, 993
BseNI	ACTGG	2 cut(s)	1073, 1637
BseRI	GAGGAG	1 cut(s)	1171
BseSI	GKGCMC	1 cut(s)	289
BseXI	GCAGC	5 cut(s)	169, 880, 1307, 1603, 1639
Bsh1236I	CGCG	1 cut(s)	15
BshFI	GGCC	8 cut(s)	80, 167, 287, 296, 749, 1274, 1586, 2013
BsiHKAI	GWGCWC	1 cut(s)	216
BsiHKCI	CYCGRG	1 cut(s)	365
BsiSI	CCGG	7 cut(s)	7, 218, 241, 319, 361, 614, 1587
BslFI	GGGAC	4 cut(s)	287, 1175, 1365, 1535
BslI	CCNNNNNNNGG	4 cut(s)	318, 324, 1027, 1321
BsmAI	GTCTC	3 cut(s)	1059, 1244, 1769
BsmBI	CGTCTC	1 cut(s)	1769
BsmFI	GGGAC	4 cut(s)	287, 1175, 1365, 1535
BsmI	GAATGC	3 cut(s)	1120, 1174, 1378
BsnI	GGCC	8 cut(s)	80, 167, 287, 296, 749, 1274, 1586, 2013
BsoBI	CYCGRG	1 cut(s)	365
Bsp119I	TTCGAA	1 cut(s)	414
Bsp120I	GGGCCC	1 cut(s)	285
Bsp1286I	GDGCHC	3 cut(s)	216, 289, 1022
Bsp143I	GATC	5 cut(s)	54, 105, 357, 1257, 1689
Bsp19I	CCATGG	2 cut(s)	1517, 1670
BspANI	GGCC	8 cut(s)	80, 167, 287, 296, 749, 1274, 1586, 2013
BspCNI	CTCAG	4 cut(s)	336, 433, 568, 994
BspFNI	CGCG	1 cut(s)	15
BspHI	TCATGA	2 cut(s)	763, 1842
BspLI	GGNNCC	6 cut(s)	11, 230, 287, 303, 359, 507
BspMAI	CTGCAG	1 cut(s)	870
BspPI	GGATC	4 cut(s)	49, 352, 365, 1697
BspT104I	TTCGAA	1 cut(s)	414
BsrDI	GCAATG	2 cut(s)	1147, 1660
BsrFI	RCCGGY	2 cut(s)	240, 1586
BsrI	ACTGG	2 cut(s)	1073, 1637
BssAI	RCCGGY	2 cut(s)	240, 1586
BssMI	GATC	5 cut(s)	54, 105, 357, 1257, 1689
BssNI	GRCGYC	1 cut(s)	309
BssSI	CACGAG	1 cut(s)	161
BssT1I	CCWWGG	4 cut(s)	1022, 1275, 1517, 1670
Bst2BI	CACGAG	1 cut(s)	161
Bst2UI	CCWGG	5 cut(s)	77, 290, 299, 385, 1384
Bst4CI	ACNGT	5 cut(s)	784, 925, 1467, 1967, 1984
Bst6I	CTCTTC	3 cut(s)	725, 737, 1093
BstACI	GRCGYC	1 cut(s)	309
BstAPI	GCANNNNNTGC	1 cut(s)	667
BstBI	TTCGAA	1 cut(s)	414
BstC8I	GCNNGC	8 cut(s)	135, 139, 242, 285, 1272, 1451, 1461, 1667
BstDEI	CTNAG	7 cut(s)	323, 441, 539, 576, 932, 1002, 1454
BstDSI	CCRYGG	5 cut(s)	19, 750, 783, 1517, 1670
BstFNI	CGCG	1 cut(s)	15
BstHHI	GCGC	2 cut(s)	727, 817
BstKTI	GATC	5 cut(s)	57, 108, 360, 1260, 1692
BstMAI	GTCTC	3 cut(s)	1059, 1244, 1769
BstMBI	GATC	5 cut(s)	54, 105, 357, 1257, 1689
BstMWI	GCNNNNNNNGC	9 cut(s)	21, 147, 280, 293, 328, 524, 667, 724, 2035
BstNI	CCWGG	5 cut(s)	77, 290, 299, 385, 1384
BstNSI	RCATGY	4 cut(s)	133, 374, 1453, 1762
BstSCI	CCNGG	9 cut(s)	6, 75, 216, 288, 297, 317, 383, 613, 1382
BstSFI	CTRYAG	2 cut(s)	528, 866
BstSLI	GKGCMC	1 cut(s)	289
BstUI	CGCG	1 cut(s)	15
BstV1I	GCAGC	5 cut(s)	169, 880, 1307, 1603, 1639
BstV2I	GAAGAC	1 cut(s)	190
BstX2I	RGATCY	2 cut(s)	54, 357
BstYI	RGATCY	2 cut(s)	54, 357
BsuRI	GGCC	8 cut(s)	80, 167, 287, 296, 749, 1274, 1586, 2013
BtgI	CCRYGG	5 cut(s)	19, 750, 783, 1517, 1670
BtgZI	GCGATG	1 cut(s)	845
BtrI	CACGTC	1 cut(s)	196
BtsIMutI	CAGTG	4 cut(s)	1472, 1515, 1644, 1814
Cac8I	GCNNGC	8 cut(s)	135, 139, 242, 285, 1272, 1451, 1461, 1667
CciI	TCATGA	2 cut(s)	763, 1842
CfoI	GCGC	2 cut(s)	727, 817
Cfr10I	RCCGGY	2 cut(s)	240, 1586
CseI	GACGC	2 cut(s)	317, 1796
Csp6I	GTAC	5 cut(s)	436, 1513, 1675, 1858, 1923
CviQI	GTAC	5 cut(s)	436, 1513, 1675, 1858, 1923
DdeI	CTNAG	7 cut(s)	323, 441, 539, 576, 932, 1002, 1454
DpnI	GATC	5 cut(s)	56, 107, 359, 1259, 1691
DpnII	GATC	5 cut(s)	54, 105, 357, 1257, 1689
DraI	TTTAAA	1 cut(s)	1404
DriI	GACNNNNNGTC	1 cut(s)	712
EaeI	YGGCCR	2 cut(s)	1584, 2011
Eam1104I	CTCTTC	3 cut(s)	725, 737, 1093
Eam1105I	GACNNNNNGTC	1 cut(s)	712
EarI	CTCTTC	3 cut(s)	725, 737, 1093
EciI	GGCGGA	1 cut(s)	600
Eco130I	CCWWGG	4 cut(s)	1022, 1275, 1517, 1670
Eco24I	GRGCYC	2 cut(s)	289, 1022
Eco32I	GATATC	1 cut(s)	1840
Eco47I	GGWCC	5 cut(s)	4, 10, 229, 301, 505
Eco57I	CTGAAG	1 cut(s)	1776
Eco88I	CYCGRG	1 cut(s)	365
EcoO109I	RGGNCCY	5 cut(s)	79, 229, 286, 301, 505
EcoRI	GAATTC	2 cut(s)	392, 1435
EcoRII	CCWGG	5 cut(s)	75, 288, 297, 383, 1382
EcoRV	GATATC	1 cut(s)	1840
EcoT14I	CCWWGG	4 cut(s)	1022, 1275, 1517, 1670
EcoT38I	GRGCYC	2 cut(s)	289, 1022
ErhI	CCWWGG	4 cut(s)	1022, 1275, 1517, 1670
Esp3I	CGTCTC	1 cut(s)	1769
FaqI	GGGAC	4 cut(s)	287, 1175, 1365, 1535
FauI	CCCGC	3 cut(s)	146, 219, 276
FbaI	TGATCA	1 cut(s)	1257
FriOI	GRGCYC	2 cut(s)	289, 1022
FspBI	CTAG	3 cut(s)	897, 1344, 1419
FspI	TGCGCA	1 cut(s)	816
GlaI	GCGC	2 cut(s)	726, 816
HaeIII	GGCC	8 cut(s)	80, 167, 287, 296, 749, 1274, 1586, 2013
HapII	CCGG	7 cut(s)	7, 218, 241, 319, 361, 614, 1587
HgaI	GACGC	2 cut(s)	317, 1796
HhaI	GCGC	2 cut(s)	727, 817
Hin1I	GRCGYC	1 cut(s)	309
Hin6I	GCGC	2 cut(s)	725, 815
HinP1I	GCGC	2 cut(s)	725, 815
HindIII	AAGCTT	2 cut(s)	536, 914
HpaII	CCGG	7 cut(s)	7, 218, 241, 319, 361, 614, 1587
HphI	GGTGA	6 cut(s)	346, 769, 965, 1252, 1880, 1979
Hpy166II	GTNNAC	2 cut(s)	1513, 1858
Hpy8I	GTNNAC	2 cut(s)	1513, 1858
Hpy99I	CGWCG	1 cut(s)	311
HpyAV	CCTTC	9 cut(s)	184, 496, 556, 847, 943, 1021, 1285, 1922, 1940
HpyCH4III	ACNGT	5 cut(s)	784, 925, 1467, 1967, 1984
HpyCH4IV	ACGT	2 cut(s)	195, 800
HpyF10VI	GCNNNNNNNGC	9 cut(s)	21, 147, 280, 293, 328, 524, 667, 724, 2035
HpyF3I	CTNAG	7 cut(s)	323, 441, 539, 576, 932, 1002, 1454
HpySE526I	ACGT	2 cut(s)	195, 800
Hsp92I	GRCGYC	1 cut(s)	309
HspAI	GCGC	2 cut(s)	725, 815
KroI	GCCGGC	1 cut(s)	240
KroNI	GCCGGC	1 cut(s)	242
Ksp22I	TGATCA	1 cut(s)	1257
Kzo9I	GATC	5 cut(s)	54, 105, 357, 1257, 1689
Lsp1109I	GCAGC	5 cut(s)	169, 880, 1307, 1603, 1639
LweI	GCATC	7 cut(s)	451, 562, 880, 1464, 1579, 1623, 1840
MaeI	CTAG	3 cut(s)	897, 1344, 1419
MaeII	ACGT	2 cut(s)	195, 800
MaeIII	GTNAC	4 cut(s)	313, 1055, 1300, 1547
MalI	GATC	5 cut(s)	56, 107, 359, 1259, 1691
MboI	GATC	5 cut(s)	54, 105, 357, 1257, 1689
MflI	RGATCY	2 cut(s)	54, 357
MhlI	GDGCHC	3 cut(s)	216, 289, 1022
MlsI	TGGCCA	1 cut(s)	2013
MluCI	AATT	8 cut(s)	71, 392, 604, 775, 1046, 1435, 1540, 1750
MluNI	TGGCCA	1 cut(s)	2013
MlyI	GAGTC	4 cut(s)	688, 1157, 1181, 1387
MmeI	TCCRAC	4 cut(s)	335, 783, 1075, 1966
Mox20I	TGGCCA	1 cut(s)	2013
MroNI	GCCGGC	1 cut(s)	240
MscI	TGGCCA	1 cut(s)	2013
MseI	TTAA	5 cut(s)	621, 1403, 1427, 1722, 2046
MslI	CAYNNNNRTG	1 cut(s)	1763
Msp20I	TGGCCA	1 cut(s)	2013
MspA1I	CMGCKG	3 cut(s)	226, 1360, 1652
MspI	CCGG	7 cut(s)	7, 218, 241, 319, 361, 614, 1587
MspR9I	CCNGG	9 cut(s)	8, 77, 218, 290, 299, 319, 385, 615, 1384
Mva1269I	GAATGC	3 cut(s)	1120, 1174, 1378
MvaI	CCWGG	5 cut(s)	77, 290, 299, 385, 1384
MvnI	CGCG	1 cut(s)	15
MwoI	GCNNNNNNNGC	9 cut(s)	21, 147, 280, 293, 328, 524, 667, 724, 2035
NaeI	GCCGGC	1 cut(s)	242
NciI	CCSGG	4 cut(s)	8, 218, 319, 615
NcoI	CCATGG	2 cut(s)	1517, 1670
NdeII	GATC	5 cut(s)	54, 105, 357, 1257, 1689
NgoMIV	GCCGGC	1 cut(s)	240
NlaIV	GGNNCC	6 cut(s)	11, 230, 287, 303, 359, 507
NmeAIII	GCCGAG	1 cut(s)	126
NmuCI	GTSAC	3 cut(s)	313, 1300, 1547
NsbI	TGCGCA	1 cut(s)	816
NspI	RCATGY	4 cut(s)	133, 374, 1453, 1762
NspV	TTCGAA	1 cut(s)	414
PaeI	GCATGC	1 cut(s)	1453
PaeR7I	CTCGAG	1 cut(s)	365
PagI	TCATGA	2 cut(s)	763, 1842
PcsI	WCGNNNNNNNCGW	2 cut(s)	207, 402
PctI	GAATGC	3 cut(s)	1120, 1174, 1378
PdiI	GCCGGC	1 cut(s)	242
PfeI	GAWTC	8 cut(s)	760, 835, 904, 1205, 1712, 1871, 1989, 1995
PflFI	GACNNNGTC	1 cut(s)	8
PleI	GAGTC	4 cut(s)	687, 1157, 1181, 1386
PpsI	GAGTC	4 cut(s)	687, 1157, 1181, 1386
PpuMI	RGGWCCY	3 cut(s)	229, 301, 505
Psp5II	RGGWCCY	3 cut(s)	229, 301, 505
Psp6I	CCWGG	5 cut(s)	75, 288, 297, 383, 1382
PspGI	CCWGG	5 cut(s)	75, 288, 297, 383, 1382
PspN4I	GGNNCC	6 cut(s)	11, 230, 287, 303, 359, 507
PspOMI	GGGCCC	1 cut(s)	285
PspPPI	RGGWCCY	3 cut(s)	229, 301, 505
PspXI	VCTCGAGB	1 cut(s)	365
PstI	CTGCAG	1 cut(s)	870
PsuI	RGATCY	2 cut(s)	54, 357
PsyI	GACNNNGTC	1 cut(s)	8
PvuII	CAGCTG	1 cut(s)	1652
RsaI	GTAC	5 cut(s)	437, 1514, 1676, 1859, 1924
RsaNI	GTAC	5 cut(s)	436, 1513, 1675, 1858, 1923
RseI	CAYNNNNRTG	1 cut(s)	1763
SaqAI	TTAA	5 cut(s)	621, 1403, 1427, 1722, 2046
Sau3AI	GATC	5 cut(s)	54, 105, 357, 1257, 1689
SchI	GAGTC	4 cut(s)	688, 1157, 1181, 1387
ScrFI	CCNGG	9 cut(s)	8, 77, 218, 290, 299, 319, 385, 615, 1384
SduI	GDGCHC	3 cut(s)	216, 289, 1022
SfaNI	GCATC	7 cut(s)	451, 562, 880, 1464, 1579, 1623, 1840
SfcI	CTRYAG	2 cut(s)	528, 866
SfiI	GGCCNNNNNGGCC	1 cut(s)	293
Sfr274I	CTCGAG	1 cut(s)	365
SfuI	TTCGAA	1 cut(s)	414
SinI	GGWCC	5 cut(s)	4, 10, 229, 301, 505
SlaI	CTCGAG	1 cut(s)	365
SmiMI	CAYNNNNRTG	1 cut(s)	1763
SmlI	CTYRAG	4 cut(s)	182, 365, 431, 719
SmoI	CTYRAG	4 cut(s)	182, 365, 431, 719
SphI	GCATGC	1 cut(s)	1453
Sse9I	AATT	8 cut(s)	71, 392, 604, 775, 1046, 1435, 1540, 1750
SspMI	CTAG	3 cut(s)	897, 1344, 1419
StyD4I	CCNGG	9 cut(s)	6, 75, 216, 288, 297, 317, 383, 613, 1382
StyI	CCWWGG	4 cut(s)	1022, 1275, 1517, 1670
TaaI	ACNGT	5 cut(s)	784, 925, 1467, 1967, 1984
TaiI	ACGT	2 cut(s)	198, 803
TaqI	TCGA	8 cut(s)	45, 126, 201, 270, 366, 414, 893, 1166
TasI	AATT	8 cut(s)	71, 392, 604, 775, 1046, 1435, 1540, 1750
TauI	GCSGC	5 cut(s)	144, 170, 173, 296, 1360
TfiI	GAWTC	8 cut(s)	760, 835, 904, 1205, 1712, 1871, 1989, 1995
Tru1I	TTAA	5 cut(s)	621, 1403, 1427, 1722, 2046
Tru9I	TTAA	5 cut(s)	621, 1403, 1427, 1722, 2046
TscAI	CASTG	4 cut(s)	1472, 1515, 1644, 1821
TseFI	GTSAC	3 cut(s)	313, 1300, 1547
TseI	GCWGC	5 cut(s)	157, 868, 1295, 1616, 1652
Tsp45I	GTSAC	3 cut(s)	313, 1300, 1547
TspDTI	ATGAA	9 cut(s)	405, 475, 582, 586, 752, 848, 908, 1239, 1425
TspGWI	ACGGA	2 cut(s)	1709, 1799
TspRI	CASTG	4 cut(s)	1472, 1515, 1644, 1821
Tth111I	GACNNNGTC	1 cut(s)	8
VpaK11BI	GGWCC	5 cut(s)	4, 10, 229, 301, 505
XapI	RAATTY	5 cut(s)	71, 392, 604, 775, 1435
XbaI	TCTAGA	1 cut(s)	1343
XceI	RCATGY	4 cut(s)	133, 374, 1453, 1762
XhoI	CTCGAG	1 cut(s)	365
XspI	CTAG	3 cut(s)	897, 1344, 1419

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.