Rh5CG262100

Plant organelle RNA recognition domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0009357
Physical Location & Seq
Forward (+)
27986350 .. 27987735
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG262100.1

Sequence Viewer

Length: 1386 bp
ATGAACATCTTCTTCACCTATTCCTCCCATTTCCTCAAACCCCACTCCAAAACCCTCCACCCCATCCCTCTCCTCCTCCTCCACAACCTCACCTCCACCAGACCCATCTCCAAATCCACCTCCATCCCCAAGAAAATGGACCGGGTCCGCGACCACGGCTACGACAACTACATGGAAATCGAGAAGAAGATCCGCAAAGTCCTCAAATTCCAGGCCCTCATTCTCTCCCAGCCCCACCAGATCATCCAAGCCTCTCGCCTCGACATGCTCGCCCGCCGCCTCGGCTTCAAGCAGCACGAGGCCGCCGCCTTCGTCCTCAAGTTCCCTCACGTCTTCGAGATTTACGAGCACCCGGTTCAGCGGGTCCTCTATTGCCGGCTGACCCGAAAAGCCCACCTCCAAATCGAGCAGGAGAAGCGGGCCCTGGCGGCCCAGGTCCCCGACGCCGTGACCCGGCTCAGGAAGCTGGTGATGATGTCCAACACGGGTCGGATCCGGCTCGAGCATGTTCGGATTGCCAGGTATGAATTCGGGCTACCCGATGATTTCGAATACTCTGTAGTTCTCAAGTACCCTGAGTATTTCAGATTGTTTGATGCTGATGAGAGTAGGAGTAAGTACATTGAGGTAGTTGAGACCGACCCAAGTTTAGCTGTTTGTGCTATAGAGAAGCTTAGGGAGAGAGAGTATAGGGAGAAGGGGGTTGATGCTGAGGATATAAGGTTTTCATTCATTGTGAATTTTCCGCCTGGGTTTAAGATAGGGAAGTATTATAGGATTGCGGTGTGGAAATGGCAGAGAGTGCCGTATTGGAGTCCTTATGAGGATGTTTCGGGGTATGACATGAGGTCGCTTGAGGCGCAGAAGAGGATGGAGAAGAGGGCCGTGGCGGTGATTCATGAGCTGTTGAATTTGACCGTGGAGAAGAAGATTACGTTGGAGAGGATTGCGCATTTTAGGATGGCGATGAATCTGCCCAAGAAGTTGAAGGAGTTTCTTCTGCAGCATCAGGGGATTTTCTACATTTCGACTAGGGGGAATCATGGGAAGCTTCATACGGTGTTTCTTAGGGAGGCTTATAGGAAGGGTGAGTTGGTAGAGCCGAATGATTTGTATTTGGCCAGAAGAAAGTTGGCTGAGTTGGTGTTGATGAGCCCAAGGAAGGCGAAAATGGATAGTGAATTGGTTAGTTACCATAGAGACTGGGGAGATGATGAGAGGGGGCTCGTTGGAAGAGAATGTGTTGAGAATGCTTTTGAAGATTTTGGGGGTTGCAATGATGATAGGCAGAGGAGGGACTCAAATGCGGGTGATGATTATGACTCCGATACAGACGATGGTTCTGATAAAACTCTGGATGAAAAGGATGTCTGTGTAACGGATTGA

Protein Analysis

461

Amino Acids

54.21

Weight (kDa)

8.95

Isoelectric Point (pI)

36.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PORR PF11955 49 - 386 3.1e-113 Plant organelle RNA recognition domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 951
AccII CGCG 1 cut(s) 150
AclWI GGATC 3 cut(s) 184, 487, 500
AcoI YGGCCR 1 cut(s) 1119
AcsI RAATTY 4 cut(s) 206, 527, 739, 910
AcyI GRCGYC 1 cut(s) 444
AfaI GTAC 2 cut(s) 572, 620
AfiI CCNNNNNNNGG 3 cut(s) 453, 459, 1162
AgsI TTSAA 4 cut(s) 289, 910, 988, 1259
AhdI GACNNNNNGTC 1 cut(s) 847
AjiI CACGTC 1 cut(s) 331
AjnI CCWGG 5 cut(s) 210, 423, 432, 518, 748
AjuI GAANNNNNNNTTGG 4 cut(s) 920, 952, 1076, 1108
AluBI AGCT 5 cut(s) 466, 653, 673, 904, 1051
AluI AGCT 5 cut(s) 466, 653, 673, 904, 1051
Alw21I GWGCWC 1 cut(s) 351
Alw26I GTCTC 2 cut(s) 629, 1194
AlwI GGATC 3 cut(s) 184, 487, 500
Ama87I CYCGRG 1 cut(s) 500
AoxI GGCC 6 cut(s) 213, 300, 420, 429, 882, 1119
ApaI GGGCCC 1 cut(s) 424
ApeKI GCWGC 2 cut(s) 292, 1003
ApoI RAATTY 4 cut(s) 206, 527, 739, 910
Asp700I GAANNNNTTC 1 cut(s) 8
AspLEI GCGC 2 cut(s) 862, 952
AspS9I GGNCC 9 cut(s) 139, 145, 214, 364, 420, 421, 430, 436, 882
AsuC2I CCSGG 3 cut(s) 143, 353, 454
AsuHPI GGTGA 6 cut(s) 7, 82, 481, 904, 1100, 1322
AsuII TTCGAA 1 cut(s) 549
AvaI CYCGRG 1 cut(s) 500
AvaII GGWCC 4 cut(s) 139, 145, 364, 436
BaeGI GKGCMC 1 cut(s) 424
BalI TGGCCA 1 cut(s) 1121
BamHI GGATCC 1 cut(s) 492
BanII GRGCYC 3 cut(s) 424, 1157, 1227
BauI CACGAG 1 cut(s) 296
BbsI GAAGAC 1 cut(s) 325
Bbv12I GWGCWC 1 cut(s) 351
BbvCI CCTCAGC 1 cut(s) 711
BbvI GCAGC 2 cut(s) 304, 1015
BccI CCATC 6 cut(s) 71, 113, 131, 865, 955, 1331
BceAI ACGGC 4 cut(s) 172, 431, 790, 869
BcgI CGANNNNNNTGC 2 cut(s) 955, 989
BciT130I CCWGG 5 cut(s) 212, 425, 434, 520, 750
BcnI CCSGG 3 cut(s) 143, 353, 454
BcoDI GTCTC 2 cut(s) 629, 1194
BfaI CTAG 1 cut(s) 1032
BfmI CTRYAG 3 cut(s) 558, 663, 1001
BglI GCCNNNNNGGC 2 cut(s) 282, 428
BisI GCNGC 6 cut(s) 277, 293, 303, 306, 429, 1004
BlsI GCNGC 6 cut(s) 278, 294, 304, 307, 430, 1005
Bme1390I CCNGG 8 cut(s) 143, 212, 353, 425, 434, 454, 520, 750
Bme18I GGWCC 4 cut(s) 139, 145, 364, 436
BmeRI GACNNNNNGTC 1 cut(s) 847
BmeT110I CYCGRG 1 cut(s) 500
BmgBI CACGTC 1 cut(s) 331
BmgT120I GGNCC 9 cut(s) 139, 145, 214, 364, 420, 421, 430, 436, 882
BmiI GGNNCC 5 cut(s) 146, 365, 422, 438, 494
BmrFI CCNGG 8 cut(s) 143, 212, 353, 425, 434, 454, 520, 750
BmrI ACTGGG 1 cut(s) 1213
BmsI GCATC 3 cut(s) 586, 697, 1015
BmuI ACTGGG 1 cut(s) 1213
BpiI GAAGAC 1 cut(s) 325
Bpu10I CCTNAGC 3 cut(s) 458, 674, 711
Bpu14I TTCGAA 1 cut(s) 549
BpuEI CTTGAG 3 cut(s) 302, 551, 875
BpuMI CCSGG 3 cut(s) 143, 353, 454
BsaHI GRCGYC 1 cut(s) 444
BsaI GGTCTC 1 cut(s) 629
BsaJI CCNNGG 8 cut(s) 154, 280, 423, 432, 749, 885, 918, 1157
BsaXI ACNNNNNCTCC 4 cut(s) 77, 107, 671, 701
Bsc4I CCNNNNNNNGG 3 cut(s) 453, 459, 1162
Bse118I RCCGGY 1 cut(s) 375
Bse1I ACTGG 1 cut(s) 1208
Bse3DI GCAATG 1 cut(s) 1282
BseBI CCWGG 5 cut(s) 212, 425, 434, 520, 750
BseDI CCNNGG 8 cut(s) 154, 280, 423, 432, 749, 885, 918, 1157
BseGI GGATG 8 cut(s) 63, 123, 243, 832, 876, 966, 1363, 1372
BseLI CCNNNNNNNGG 3 cut(s) 453, 459, 1162
BseMI GCAATG 1 cut(s) 1282
BseMII CTCAG 4 cut(s) 472, 567, 702, 1128
BseNI ACTGG 1 cut(s) 1208
BseRI GAGGAG 4 cut(s) 62, 65, 68, 1306
BseSI GKGCMC 1 cut(s) 424
BseXI GCAGC 2 cut(s) 304, 1015
BseYI CCCAGC 1 cut(s) 228
Bsh1236I CGCG 1 cut(s) 150
BshFI GGCC 6 cut(s) 215, 302, 422, 431, 884, 1121
BsiHKAI GWGCWC 1 cut(s) 351
BsiHKCI CYCGRG 1 cut(s) 500
BsiSI CCGG 5 cut(s) 142, 353, 376, 454, 496
BslFI GGGAC 2 cut(s) 422, 1310
BslI CCNNNNNNNGG 3 cut(s) 453, 459, 1162
BsmAI GTCTC 2 cut(s) 629, 1194
BsmFI GGGAC 2 cut(s) 422, 1310
BsmI GAATGC 1 cut(s) 1255
BsnI GGCC 6 cut(s) 215, 302, 422, 431, 884, 1121
Bso31I GGTCTC 1 cut(s) 629
BsoBI CYCGRG 1 cut(s) 500
Bsp119I TTCGAA 1 cut(s) 549
Bsp120I GGGCCC 1 cut(s) 420
Bsp1286I GDGCHC 4 cut(s) 351, 424, 1157, 1227
Bsp143I GATC 3 cut(s) 189, 240, 492
BspANI GGCC 6 cut(s) 215, 302, 422, 431, 884, 1121
BspCNI CTCAG 4 cut(s) 471, 568, 703, 1129
BspFNI CGCG 1 cut(s) 150
BspHI TCATGA 1 cut(s) 898
BspLI GGNNCC 5 cut(s) 146, 365, 422, 438, 494
BspMAI CTGCAG 1 cut(s) 1005
BspPI GGATC 3 cut(s) 184, 487, 500
BspT104I TTCGAA 1 cut(s) 549
BspTNI GGTCTC 1 cut(s) 629
BsrDI GCAATG 1 cut(s) 1282
BsrFI RCCGGY 1 cut(s) 375
BsrI ACTGG 1 cut(s) 1208
BssAI RCCGGY 1 cut(s) 375
BssECI CCNNGG 8 cut(s) 154, 280, 423, 432, 749, 885, 918, 1157
BssMI GATC 3 cut(s) 189, 240, 492
BssNI GRCGYC 1 cut(s) 444
BssSI CACGAG 1 cut(s) 296
BssT1I CCWWGG 1 cut(s) 1157
Bst2BI CACGAG 1 cut(s) 296
Bst2UI CCWGG 5 cut(s) 212, 425, 434, 520, 750
Bst4CI ACNGT 2 cut(s) 919, 1060
Bst6I CTCTTC 3 cut(s) 860, 872, 1228
BstACI GRCGYC 1 cut(s) 444
BstAPI GCANNNNNTGC 1 cut(s) 802
BstBI TTCGAA 1 cut(s) 549
BstC8I GCNNGC 4 cut(s) 270, 274, 377, 420
BstDEI CTNAG 6 cut(s) 458, 576, 674, 711, 1067, 1137
BstDSI CCRYGG 3 cut(s) 154, 885, 918
BstF5I GGATG 8 cut(s) 63, 123, 243, 832, 876, 966, 1363, 1372
BstFNI CGCG 1 cut(s) 150
BstHHI GCGC 2 cut(s) 862, 952
BstKTI GATC 3 cut(s) 192, 243, 495
BstMAI GTCTC 2 cut(s) 629, 1194
BstMBI GATC 3 cut(s) 189, 240, 492
BstMWI GCNNNNNNNGC 8 cut(s) 156, 282, 415, 428, 463, 659, 802, 859
BstNI CCWGG 5 cut(s) 212, 425, 434, 520, 750
BstNSI RCATGY 2 cut(s) 268, 509
BstSCI CCNGG 8 cut(s) 141, 210, 351, 423, 432, 452, 518, 748
BstSFI CTRYAG 3 cut(s) 558, 663, 1001
BstSLI GKGCMC 1 cut(s) 424
BstUI CGCG 1 cut(s) 150
BstV1I GCAGC 2 cut(s) 304, 1015
BstV2I GAAGAC 1 cut(s) 325
BstX2I RGATCY 2 cut(s) 189, 492
BstXI CCANNNNNNTGG 1 cut(s) 136
BstYI RGATCY 2 cut(s) 189, 492
BsuRI GGCC 6 cut(s) 215, 302, 422, 431, 884, 1121
BtgI CCRYGG 3 cut(s) 154, 885, 918
BtgZI GCGATG 1 cut(s) 980
BtrI CACGTC 1 cut(s) 331
BtsCI GGATG 8 cut(s) 63, 123, 243, 832, 876, 966, 1363, 1372
Cac8I GCNNGC 4 cut(s) 270, 274, 377, 420
CciI TCATGA 1 cut(s) 898
CfoI GCGC 2 cut(s) 862, 952
Cfr10I RCCGGY 1 cut(s) 375
Cfr13I GGNCC 9 cut(s) 139, 145, 214, 364, 420, 421, 430, 436, 882
CseI GACGC 1 cut(s) 452
Csp6I GTAC 2 cut(s) 571, 619
CviAII CATG 6 cut(s) 172, 265, 506, 844, 899, 1043
CviQI GTAC 2 cut(s) 571, 619
DdeI CTNAG 6 cut(s) 458, 576, 674, 711, 1067, 1137
DpnI GATC 3 cut(s) 191, 242, 494
DpnII GATC 3 cut(s) 189, 240, 492
DriI GACNNNNNGTC 1 cut(s) 847
EaeI YGGCCR 1 cut(s) 1119
Eam1104I CTCTTC 3 cut(s) 860, 872, 1228
Eam1105I GACNNNNNGTC 1 cut(s) 847
EarI CTCTTC 3 cut(s) 860, 872, 1228
EciI GGCGGA 1 cut(s) 735
Eco130I CCWWGG 1 cut(s) 1157
Eco24I GRGCYC 3 cut(s) 424, 1157, 1227
Eco31I GGTCTC 1 cut(s) 629
Eco47I GGWCC 4 cut(s) 139, 145, 364, 436
Eco88I CYCGRG 1 cut(s) 500
EcoO109I RGGNCCY 4 cut(s) 214, 364, 421, 436
EcoRI GAATTC 1 cut(s) 527
EcoRII CCWGG 5 cut(s) 210, 423, 432, 518, 748
EcoT14I CCWWGG 1 cut(s) 1157
EcoT38I GRGCYC 3 cut(s) 424, 1157, 1227
ErhI CCWWGG 1 cut(s) 1157
FaeI CATG 6 cut(s) 175, 268, 509, 847, 902, 1046
FaqI GGGAC 2 cut(s) 422, 1310
FatI CATG 6 cut(s) 171, 264, 505, 843, 898, 1042
FauI CCCGC 4 cut(s) 281, 354, 411, 1300
Fnu4HI GCNGC 6 cut(s) 277, 293, 303, 306, 429, 1004
FokI GGATG 8 cut(s) 50, 110, 230, 839, 883, 973, 1370, 1379
FriOI GRGCYC 3 cut(s) 424, 1157, 1227
Fsp4HI GCNGC 6 cut(s) 277, 293, 303, 306, 429, 1004
FspBI CTAG 1 cut(s) 1032
FspI TGCGCA 1 cut(s) 951
GlaI GCGC 2 cut(s) 861, 951
GluI GCNGC 6 cut(s) 277, 293, 303, 306, 429, 1004
GsaI CCCAGC 1 cut(s) 232
HaeIII GGCC 6 cut(s) 215, 302, 422, 431, 884, 1121
HapII CCGG 5 cut(s) 142, 353, 376, 454, 496
HgaI GACGC 1 cut(s) 452
HhaI GCGC 2 cut(s) 862, 952
Hin1I GRCGYC 1 cut(s) 444
Hin1II CATG 6 cut(s) 175, 268, 509, 847, 902, 1046
Hin6I GCGC 2 cut(s) 860, 950
HinP1I GCGC 2 cut(s) 860, 950
HindIII AAGCTT 2 cut(s) 671, 1049
HinfI GANTC 6 cut(s) 814, 895, 970, 1039, 1298, 1322
HpaII CCGG 5 cut(s) 142, 353, 376, 454, 496
HphI GGTGA 6 cut(s) 7, 82, 481, 904, 1100, 1322
Hpy188I TCNGA 5 cut(s) 492, 513, 587, 1327, 1345
Hpy188III TCNNGA 5 cut(s) 181, 337, 460, 899, 1355
Hpy99I CGWCG 1 cut(s) 446
HpyAV CCTTC 5 cut(s) 319, 691, 982, 1078, 1156
HpyCH4III ACNGT 2 cut(s) 919, 1060
HpyCH4IV ACGT 2 cut(s) 330, 935
HpyCH4V TGCA 2 cut(s) 1003, 1275
HpyF10VI GCNNNNNNNGC 8 cut(s) 156, 282, 415, 428, 463, 659, 802, 859
HpyF3I CTNAG 6 cut(s) 458, 576, 674, 711, 1067, 1137
HpySE526I ACGT 2 cut(s) 330, 935
Hsp92I GRCGYC 1 cut(s) 444
Hsp92II CATG 6 cut(s) 175, 268, 509, 847, 902, 1046
HspAI GCGC 2 cut(s) 860, 950
KroI GCCGGC 1 cut(s) 375
KroNI GCCGGC 1 cut(s) 377
Kzo9I GATC 3 cut(s) 189, 240, 492
Lsp1109I GCAGC 2 cut(s) 304, 1015
LweI GCATC 3 cut(s) 586, 697, 1015
MaeI CTAG 1 cut(s) 1032
MaeII ACGT 2 cut(s) 330, 935
MaeIII GTNAC 3 cut(s) 448, 1190, 1375
MalI GATC 3 cut(s) 191, 242, 494
MboI GATC 3 cut(s) 189, 240, 492
MflI RGATCY 2 cut(s) 189, 492
MhlI GDGCHC 4 cut(s) 351, 424, 1157, 1227
MlsI TGGCCA 1 cut(s) 1121
MluCI AATT 5 cut(s) 206, 527, 739, 910, 1181
MluNI TGGCCA 1 cut(s) 1121
MlyI GAGTC 3 cut(s) 823, 1292, 1316
MmeI TCCRAC 4 cut(s) 470, 504, 918, 1210
Mox20I TGGCCA 1 cut(s) 1121
MroNI GCCGGC 1 cut(s) 375
MroXI GAANNNNTTC 1 cut(s) 8
MscI TGGCCA 1 cut(s) 1121
MseI TTAA 1 cut(s) 756
Msp20I TGGCCA 1 cut(s) 1121
MspA1I CMGCKG 1 cut(s) 361
MspI CCGG 5 cut(s) 142, 353, 376, 454, 496
MspR9I CCNGG 8 cut(s) 143, 212, 353, 425, 434, 454, 520, 750
Mva1269I GAATGC 1 cut(s) 1255
MvaI CCWGG 5 cut(s) 212, 425, 434, 520, 750
MvnI CGCG 1 cut(s) 150
MwoI GCNNNNNNNGC 8 cut(s) 156, 282, 415, 428, 463, 659, 802, 859
NaeI GCCGGC 1 cut(s) 377
NciI CCSGG 3 cut(s) 143, 353, 454
NdeII GATC 3 cut(s) 189, 240, 492
NgoMIV GCCGGC 1 cut(s) 375
NlaIII CATG 6 cut(s) 175, 268, 509, 847, 902, 1046
NlaIV GGNNCC 5 cut(s) 146, 365, 422, 438, 494
NmeAIII GCCGAG 1 cut(s) 261
NmuCI GTSAC 1 cut(s) 448
NsbI TGCGCA 1 cut(s) 951
NspI RCATGY 2 cut(s) 268, 509
NspV TTCGAA 1 cut(s) 549
PaeR7I CTCGAG 1 cut(s) 500
PagI TCATGA 1 cut(s) 898
PcsI WCGNNNNNNNCGW 2 cut(s) 342, 537
PctI GAATGC 1 cut(s) 1255
PdiI GCCGGC 1 cut(s) 377
PdmI GAANNNNTTC 1 cut(s) 8
PfeI GAWTC 3 cut(s) 895, 970, 1039
PflFI GACNNNGTC 1 cut(s) 143
PkrI GCNGC 6 cut(s) 278, 294, 304, 307, 430, 1005
PleI GAGTC 3 cut(s) 822, 1292, 1316
PpsI GAGTC 3 cut(s) 822, 1292, 1316
PpuMI RGGWCCY 2 cut(s) 364, 436
Psp5II RGGWCCY 2 cut(s) 364, 436
Psp6I CCWGG 5 cut(s) 210, 423, 432, 518, 748
PspFI CCCAGC 1 cut(s) 228
PspGI CCWGG 5 cut(s) 210, 423, 432, 518, 748
PspN4I GGNNCC 5 cut(s) 146, 365, 422, 438, 494
PspOMI GGGCCC 1 cut(s) 420
PspPI GGNCC 9 cut(s) 139, 145, 214, 364, 420, 421, 430, 436, 882
PspPPI RGGWCCY 2 cut(s) 364, 436
PspXI VCTCGAGB 1 cut(s) 500
PstI CTGCAG 1 cut(s) 1005
PsuI RGATCY 2 cut(s) 189, 492
PsyI GACNNNGTC 1 cut(s) 143
RsaI GTAC 2 cut(s) 572, 620
RsaNI GTAC 2 cut(s) 571, 619
SaqAI TTAA 1 cut(s) 756
SatI GCNGC 6 cut(s) 277, 293, 303, 306, 429, 1004
Sau3AI GATC 3 cut(s) 189, 240, 492
Sau96I GGNCC 9 cut(s) 139, 145, 214, 364, 420, 421, 430, 436, 882
SchI GAGTC 3 cut(s) 823, 1292, 1316
ScrFI CCNGG 8 cut(s) 143, 212, 353, 425, 434, 454, 520, 750
SduI GDGCHC 4 cut(s) 351, 424, 1157, 1227
SfaNI GCATC 3 cut(s) 586, 697, 1015
SfcI CTRYAG 3 cut(s) 558, 663, 1001
SfiI GGCCNNNNNGGCC 1 cut(s) 428
Sfr274I CTCGAG 1 cut(s) 500
SfuI TTCGAA 1 cut(s) 549
SinI GGWCC 4 cut(s) 139, 145, 364, 436
SlaI CTCGAG 1 cut(s) 500
SmlI CTYRAG 4 cut(s) 317, 500, 566, 854
SmoI CTYRAG 4 cut(s) 317, 500, 566, 854
Sse9I AATT 5 cut(s) 206, 527, 739, 910, 1181
SspMI CTAG 1 cut(s) 1032
StyD4I CCNGG 8 cut(s) 141, 210, 351, 423, 432, 452, 518, 748
StyI CCWWGG 1 cut(s) 1157
TaaI ACNGT 2 cut(s) 919, 1060
TaiI ACGT 2 cut(s) 333, 938
TaqI TCGA 7 cut(s) 180, 261, 336, 405, 501, 549, 1028
TaqII GACCGA 1 cut(s) 653
TasI AATT 5 cut(s) 206, 527, 739, 910, 1181
TatI WGTACW 1 cut(s) 618
TauI GCSGC 4 cut(s) 279, 305, 308, 431
TfiI GAWTC 3 cut(s) 895, 970, 1039
Tru1I TTAA 1 cut(s) 756
Tru9I TTAA 1 cut(s) 756
TseFI GTSAC 1 cut(s) 448
TseI GCWGC 2 cut(s) 292, 1003
Tsp45I GTSAC 1 cut(s) 448
TspDTI ATGAA 8 cut(s) 17, 540, 717, 721, 887, 983, 1043, 1374
Tth111I GACNNNGTC 1 cut(s) 143
VpaK11BI GGWCC 4 cut(s) 139, 145, 364, 436
XapI RAATTY 4 cut(s) 206, 527, 739, 910
XceI RCATGY 2 cut(s) 268, 509
XcmI CCANNNNNNNNNTGG 1 cut(s) 1129
XhoI CTCGAG 1 cut(s) 500
XmnI GAANNNNTTC 1 cut(s) 8
XspI CTAG 1 cut(s) 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.