Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0013762

Physical Location & Seq

Genomic Coordinates Forward (+)

29349142 .. 29362017

Gene Structure 12876 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG243000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGACAGCCATTGTTCAAATCTCCATCAATTCCTTAGCTTTCAGGTTGAGCAGTTTGCAAAATGACACATACAACAAACCCATCAAGTATTGCTCTCTATCCAGAACGAAGATTGCTTCTTTGAAGCTCAACAGGTTAACGTTGAGGGCTTTTTGGGAGAGTGGGCCTATCAGTGGAGACGGGATTTTGGTGAAAGATGAGGGGTGGAATAGGAAGAAGAAAAGAGAGGTTGTGGTGAGGTTTAATCAGGGGTTTGGGTTTAATGGTGGAGGTGGTGGTGGGAAAGATGATGGAACTACTGCTAGGGTGTTGGGTAATATAGCTGTGGCTATTGGGTTGACTTATCTTTCATTTACTGGGCAGCTTGGTTGGCTTCTGGATGCAATTGTTTCCATTTGGCTCATAGCATTTCTTGTGCCAATTGTTGGTTTGGGTGCTTTTCTGTGGTGGGCAGGACGGGATATGGTTCAAGACAGTTGCCCAAACTGCGGAAATGATTTTCAGATTTTCAAATCTACTTTAAATGATGATATGCAGCAGTGCCCGTACTGTAGTCAACCTTTCTCTGTGGTGGACAACAAGTTTGTAATGGACCCAGTGAATTTCTCTAATCGATCTACAACATTTGGCCAGGCATTTAATGACTACACACGTTCAAAAACAGGGAAGAAGGATTCTTCTACAGCGGTTGTTGATGTTGAAGCAGAAGGTGATAGCAAAGATACAAGTCTTGCTGTGATCTCATCCAGCATAACAGCAGCATATAGTTTGTGTGGAGCCTGCTTAATGATCTTTCCTATAGCTTGGCTTGCAAACTCCTCCAGTTTCATCTTTCAGAGTGAACTTGTCTATGGTAACACGAGCCCATTGCTCATTACCTTCAAGTTTGGAAGCCTCATAGCATGTTTTCTCCTGGCCATGGCATGCTTTGCTCGATCAGCAAAGCACTTCAACCAAGCATACTATCTAATGAGCTCCCAGAACAGCAATATTGAGGCCGGAGATGTGGAGGCGGCAACCAGGGCAGTTATAGGGGGAGGTCATTTCAAATCTCTTGGGATGAGATGTCTACAATGTGCTGGCATTCTGCTGCTATGGTTTTTCGGTCCTATCCCGATGTTTGTTTCATCTGTGGCTTTAGTCATATTCCTCCATGACAATTATACTGGTCGACAATATCATGTTCGTAATAGAGTCGATTGGCAAATTCAGTCTTTTCAGAAACTGAGGATTTGTGAGTCTGAGATTTTGTTTGCCCTTCGTGAAGATAATGTGATTGGTAGAGGGCCATCTGGGAAAGTGTACAAGGTCGTGTTAAGCAATCATAAAGTTATTGCCGTGAAGAAGCCGTGGAGAGGGAGAGTGAACCAGTGTGAAAATGACGATGTTGAGAAAGGTATGGTCCAAGATGATGGCTCTATAGCAGGGTTTGACACTTTGGGGAGGATTACGCACAAGAACATTATGAAGCTTTGGTATTGTTGTACTACTAGAGACTGCCAGCAGCTGTTGGTTTATGATTACATGCCAAATGGTAGTCTTGGTGATTGTCTGCACAATAAGAAAGCACGGTTGCTGAATTGGCCTACAAGGTTTAAGATTGCTCTTGGTGCTGCTGAGGGGATTTCTTATCTGCACCATGATTGTTCTCCTTCTATTGTTCATAGAAATGTGAAATCAAACAATATATTGTTGGATGGTGATTTCGGAGCTCGAGTGGTGGATATTGGAACAACTAATGGCGTTGATGCATCTGTAAAAGGGCCAGTCATTGCAGCTGCTTGTGGTTACATTGCTCCAGAATTTTCGCACGCACATGGGTTGAATGGGAAGAGTGATATATACAGCTTTGGTGTGGTGATGCTGGAATTGGTTACCGGGAAACTTCCAGTTGACCCAGAACTAGGAGAAAAGGACCTGGTGAAGTGGGTCCGTAGCACTTTGGATCAGAAGGGAGTGGACCATGTCCTTGACCCCAAGCTCGATTCTTGTTACAAGGAAGAAGTATGCAAGGTCCTCGATATTGGGCTTCTCTGCACCGATTCTCGTCCAGTCAATCGACCATCCATGAGAAGAGTGGTGGAATTGTTGCAAGAAGTGGGCAGAGGAGCATCCCCATATTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

708

Amino Acids

77.97

Weight (kDa)

8.48

Isoelectric Point (pI)

36.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF599	PF04654	247 - 385	4.1e-23	Protein of unknown function, DUF599
Pkinase	PF00069	422 - 694	7e-30	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	423 - 696	6.8e-29	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013762)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr5g0009251 RchiOBHm_Chr5g0035201
rosa_laevigata	RLG00000031650
rosa_multiflora	Rmu_co8136594.1_g000001 Rmu_sc0006233.1_g000004 Rmu_sc0006233.1_g000016 Rmu_sc0008176.1_g000004 Rmu_sc0009464.1_g000001
rosa_roxburghii	Rroxscaffold_1G00045190
rosa_samantha	Rh5AG071600 Rh5AG072400 Rh5BG243000 Rh5CG080600 Rh5CG081300 Rh5DG068200 Rh5DG069000
rosa_wichuraiana	Rw5G006700 Rw5G006760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	425
AccI	GTMKAC	2 cut(s)	1069, 1171
AciI	CCGC	3 cut(s)	489, 686, 1013
AclI	AACGTT	1 cut(s)	140
AclWI	GGATC	1 cut(s)	1953
AcoI	YGGCCR	2 cut(s)	628, 915
AcsI	RAATTY	3 cut(s)	601, 1206, 1802
AfaI	GTAC	3 cut(s)	548, 1304, 1486
AfiI	CCNNNNNNNGG	6 cut(s)	173, 425, 488, 919, 1355, 1904
AflIII	ACRYGT	1 cut(s)	650
AjnI	CCWGG	4 cut(s)	630, 912, 1019, 1917
Alw21I	GWGCWC	2 cut(s)	977, 1714
Alw26I	GTCTC	2 cut(s)	171, 1488
AlwI	GGATC	1 cut(s)	1953
AlwNI	CAGNNNCTG	2 cut(s)	1225, 1507
Ama87I	CYCGRG	1 cut(s)	1713
AoxI	GGCC	7 cut(s)	164, 628, 915, 996, 1286, 1583, 1763
ApeKI	GCWGC	8 cut(s)	361, 535, 758, 1090, 1504, 1613, 1775, 1778
ApoI	RAATTY	3 cut(s)	601, 1206, 1802
ArsI	GACNNNNNNTTYG	2 cut(s)	566, 598
AsuC2I	CCSGG	1 cut(s)	1879
AsuHPI	GGTGA	7 cut(s)	202, 247, 722, 1556, 1712, 1870, 1933
AvaI	CYCGRG	1 cut(s)	1713
AvaII	GGWCC	7 cut(s)	592, 1106, 1402, 1915, 1930, 1960, 2014
BaeGI	GKGCMC	1 cut(s)	545
BalI	TGGCCA	2 cut(s)	630, 917
BanII	GRGCYC	3 cut(s)	866, 977, 1714
BauI	CACGAG	1 cut(s)	859
Bbv12I	GWGCWC	2 cut(s)	977, 1714
BbvCI	CCTCAGC	1 cut(s)	1617
BbvI	GCAGC	8 cut(s)	373, 547, 770, 1077, 1516, 1600, 1765, 1787
BccI	CCATC	7 cut(s)	32, 89, 284, 1297, 1406, 1691, 2071
BceAI	ACGGC	2 cut(s)	1322, 1333
BcgI	CGANNNNNNTGC	4 cut(s)	850, 884, 1999, 2033
BciT130I	CCWGG	4 cut(s)	632, 914, 1021, 1919
BcnI	CCSGG	1 cut(s)	1879
BcoDI	GTCTC	2 cut(s)	171, 1488
BfaI	CTAG	3 cut(s)	303, 1491, 1904
BfmI	CTRYAG	4 cut(s)	550, 681, 798, 1419
BisI	GCNGC	9 cut(s)	362, 536, 759, 1014, 1091, 1505, 1614, 1776, 1779
BlsI	GCNGC	9 cut(s)	363, 537, 760, 1015, 1092, 1506, 1615, 1777, 1780
Bme1390I	CCNGG	5 cut(s)	632, 914, 1021, 1879, 1919
Bme18I	GGWCC	7 cut(s)	592, 1106, 1402, 1915, 1930, 1960, 2014
BmeT110I	CYCGRG	1 cut(s)	1713
BmiI	GGNNCC	3 cut(s)	594, 778, 1931
BmrFI	CCNGG	5 cut(s)	632, 914, 1021, 1879, 1919
BmrI	ACTGGG	2 cut(s)	366, 590
BmsI	GCATC	5 cut(s)	370, 1738, 1760, 1851, 2120
BmuI	ACTGGG	2 cut(s)	366, 590
BpmI	CTGGAG	2 cut(s)	805, 1782
Bpu10I	CCTNAGC	2 cut(s)	34, 1617
BpuMI	CCSGG	1 cut(s)	1879
Bsa29I	ATCGAT	1 cut(s)	613
BsaJI	CCNNGG	3 cut(s)	918, 1020, 1349
BsaXI	ACNNNNNCTCC	2 cut(s)	1701, 1731
Bsc4I	CCNNNNNNNGG	6 cut(s)	173, 425, 488, 919, 1355, 1904
Bse1I	ACTGG	8 cut(s)	361, 596, 822, 1171, 1369, 1766, 1889, 2051
Bse3DI	GCAATG	3 cut(s)	866, 1770, 1791
BseBI	CCWGG	4 cut(s)	632, 914, 1021, 1919
BseCI	ATCGAT	1 cut(s)	613
BseDI	CCNNGG	3 cut(s)	918, 1020, 1349
BseGI	GGATG	6 cut(s)	385, 743, 1065, 1702, 2063, 2111
BseLI	CCNNNNNNNGG	6 cut(s)	173, 425, 488, 919, 1355, 1904
BseMI	GCAATG	3 cut(s)	866, 1770, 1791
BseMII	CTCAG	3 cut(s)	1217, 1233, 1608
BseNI	ACTGG	8 cut(s)	361, 596, 822, 1171, 1369, 1766, 1889, 2051
BseRI	GAGGAG	2 cut(s)	808, 2121
BseSI	GKGCMC	1 cut(s)	545
BseXI	GCAGC	8 cut(s)	373, 547, 770, 1077, 1516, 1600, 1765, 1787
BsgI	GTGCAG	3 cut(s)	1538, 1619, 2020
BshFI	GGCC	7 cut(s)	166, 630, 917, 998, 1288, 1585, 1765
BshVI	ATCGAT	1 cut(s)	613
BsiHKAI	GWGCWC	2 cut(s)	977, 1714
BsiHKCI	CYCGRG	1 cut(s)	1713
BsiSI	CCGG	2 cut(s)	999, 1878
BslI	CCNNNNNNNGG	6 cut(s)	173, 425, 488, 919, 1355, 1904
BsmAI	GTCTC	2 cut(s)	171, 1488
BsmBI	CGTCTC	1 cut(s)	171
BsmI	GAATGC	1 cut(s)	1083
BsnI	GGCC	7 cut(s)	166, 630, 917, 998, 1288, 1585, 1765
BsoBI	CYCGRG	1 cut(s)	1713
Bsp1286I	GDGCHC	4 cut(s)	545, 866, 977, 1714
Bsp1407I	TGTACA	1 cut(s)	1302
Bsp143I	GATC	5 cut(s)	614, 738, 789, 935, 1945
Bsp19I	CCATGG	1 cut(s)	918
BspACI	CCGC	3 cut(s)	489, 686, 1013
BspANI	GGCC	7 cut(s)	166, 630, 917, 998, 1288, 1585, 1765
BspCNI	CTCAG	3 cut(s)	1218, 1234, 1609
BspDI	ATCGAT	1 cut(s)	613
BspLI	GGNNCC	3 cut(s)	594, 778, 1931
BspPI	GGATC	1 cut(s)	1953
BsrDI	GCAATG	3 cut(s)	866, 1770, 1791
BsrGI	TGTACA	1 cut(s)	1302
BsrI	ACTGG	8 cut(s)	361, 596, 822, 1171, 1369, 1766, 1889, 2051
BssECI	CCNNGG	3 cut(s)	918, 1020, 1349
BssMI	GATC	5 cut(s)	614, 738, 789, 935, 1945
BssSI	CACGAG	1 cut(s)	859
BssT1I	CCWWGG	1 cut(s)	918
Bst2BI	CACGAG	1 cut(s)	859
Bst2UI	CCWGG	4 cut(s)	632, 914, 1021, 1919
Bst4CI	ACNGT	3 cut(s)	476, 551, 1572
Bst6I	CTCTTC	2 cut(s)	1826, 2068
BstAPI	GCANNNNNTGC	1 cut(s)	929
BstAUI	TGTACA	1 cut(s)	1302
BstC8I	GCNNGC	6 cut(s)	781, 810, 925, 1081, 1502, 1812
BstDEI	CTNAG	4 cut(s)	34, 1226, 1242, 1617
BstDSI	CCRYGG	2 cut(s)	918, 1349
BstEII	GGTNACC	1 cut(s)	1873
BstF5I	GGATG	6 cut(s)	385, 743, 1065, 1702, 2063, 2111
BstKTI	GATC	5 cut(s)	617, 741, 792, 938, 1948
BstMAI	GTCTC	2 cut(s)	171, 1488
BstMBI	GATC	5 cut(s)	614, 738, 789, 935, 1945
BstMWI	GCNNNNNNNGC	8 cut(s)	370, 486, 809, 929, 938, 1022, 1582, 1610
BstNI	CCWGG	4 cut(s)	632, 914, 1021, 1919
BstNSI	RCATGY	3 cut(s)	906, 927, 1528
BstPI	GGTNACC	1 cut(s)	1873
BstSCI	CCNGG	5 cut(s)	630, 912, 1019, 1877, 1917
BstSFI	CTRYAG	4 cut(s)	550, 681, 798, 1419
BstSLI	GKGCMC	1 cut(s)	545
BstV1I	GCAGC	8 cut(s)	373, 547, 770, 1077, 1516, 1600, 1765, 1787
BstXI	CCANNNNNNTGG	1 cut(s)	1412
Bsu15I	ATCGAT	1 cut(s)	613
BsuRI	GGCC	7 cut(s)	166, 630, 917, 998, 1288, 1585, 1765
BsuTUI	ATCGAT	1 cut(s)	613
BtgI	CCRYGG	2 cut(s)	918, 1349
BtsCI	GGATG	6 cut(s)	385, 743, 1065, 1702, 2063, 2111
BtsI	GCAGTG	1 cut(s)	545
BtsIMutI	CAGTG	4 cut(s)	178, 545, 603, 1376
Cac8I	GCNNGC	6 cut(s)	781, 810, 925, 1081, 1502, 1812
CaiI	CAGNNNCTG	2 cut(s)	1225, 1507
ClaI	ATCGAT	1 cut(s)	613
CsiI	ACCWGGT	1 cut(s)	1917
Csp6I	GTAC	3 cut(s)	547, 1303, 1485
CviQI	GTAC	3 cut(s)	547, 1303, 1485
DdeI	CTNAG	4 cut(s)	34, 1226, 1242, 1617
DpnI	GATC	5 cut(s)	616, 740, 791, 937, 1947
DpnII	GATC	5 cut(s)	614, 738, 789, 935, 1945
DraI	TTTAAA	1 cut(s)	522
EaeI	YGGCCR	2 cut(s)	628, 915
Eam1104I	CTCTTC	2 cut(s)	1826, 2068
EarI	CTCTTC	2 cut(s)	1826, 2068
Ecl136II	GAGCTC	2 cut(s)	975, 1712
Eco130I	CCWWGG	1 cut(s)	918
Eco24I	GRGCYC	3 cut(s)	866, 977, 1714
Eco47I	GGWCC	7 cut(s)	592, 1106, 1402, 1915, 1930, 1960, 2014
Eco53kI	GAGCTC	2 cut(s)	975, 1712
Eco88I	CYCGRG	1 cut(s)	1713
Eco91I	GGTNACC	1 cut(s)	1873
EcoICRI	GAGCTC	2 cut(s)	975, 1712
EcoO109I	RGGNCCY	2 cut(s)	1915, 2014
EcoO65I	GGTNACC	1 cut(s)	1873
EcoRII	CCWGG	4 cut(s)	630, 912, 1019, 1917
EcoT14I	CCWWGG	1 cut(s)	918
EcoT22I	ATGCAT	1 cut(s)	1753
EcoT38I	GRGCYC	3 cut(s)	866, 977, 1714
ErhI	CCWWGG	1 cut(s)	918
Esp3I	CGTCTC	1 cut(s)	171
FblI	GTMKAC	2 cut(s)	1069, 1171
Fnu4HI	GCNGC	9 cut(s)	362, 536, 759, 1014, 1091, 1505, 1614, 1776, 1779
FokI	GGATG	6 cut(s)	392, 730, 1072, 1709, 2050, 2098
FriOI	GRGCYC	3 cut(s)	866, 977, 1714
Fsp4HI	GCNGC	9 cut(s)	362, 536, 759, 1014, 1091, 1505, 1614, 1776, 1779
FspBI	CTAG	3 cut(s)	303, 1491, 1904
GluI	GCNGC	9 cut(s)	362, 536, 759, 1014, 1091, 1505, 1614, 1776, 1779
GsuI	CTGGAG	2 cut(s)	805, 1782
HaeIII	GGCC	7 cut(s)	166, 630, 917, 998, 1288, 1585, 1765
HapII	CCGG	2 cut(s)	999, 1878
HincII	GTYRAC	5 cut(s)	138, 339, 557, 1172, 1894
HindII	GTYRAC	5 cut(s)	138, 339, 557, 1172, 1894
HindIII	AAGCTT	1 cut(s)	1469
HinfI	GANTC	5 cut(s)	674, 1194, 1238, 1985, 2042
HpaI	GTTAAC	1 cut(s)	138
HpaII	CCGG	2 cut(s)	999, 1878
HphI	GGTGA	7 cut(s)	202, 247, 722, 1556, 1712, 1870, 1933
Hpy188I	TCNGA	6 cut(s)	504, 837, 1221, 1243, 1709, 1950
Hpy188III	TCNNGA	6 cut(s)	102, 377, 470, 1114, 1262, 1799
HpyAV	CCTTC	6 cut(s)	664, 701, 889, 1268, 1662, 1945
HpyCH4III	ACNGT	3 cut(s)	476, 551, 1572
HpyCH4IV	ACGT	2 cut(s)	140, 652
HpyF10VI	GCNNNNNNNGC	8 cut(s)	370, 486, 809, 929, 938, 1022, 1582, 1610
HpyF3I	CTNAG	4 cut(s)	34, 1226, 1242, 1617
HpySE526I	ACGT	2 cut(s)	140, 652
KspAI	GTTAAC	1 cut(s)	138
Kzo9I	GATC	5 cut(s)	614, 738, 789, 935, 1945
LmnI	GCTCC	5 cut(s)	776, 980, 1709, 1801, 2108
Lsp1109I	GCAGC	8 cut(s)	373, 547, 770, 1077, 1516, 1600, 1765, 1787
LweI	GCATC	5 cut(s)	370, 1738, 1760, 1851, 2120
MabI	ACCWGGT	1 cut(s)	1917
MaeI	CTAG	3 cut(s)	303, 1491, 1904
MaeII	ACGT	2 cut(s)	140, 652
MaeIII	GTNAC	4 cut(s)	854, 1787, 1873, 1991
MalI	GATC	5 cut(s)	616, 740, 791, 937, 1947
MboI	GATC	5 cut(s)	614, 738, 789, 935, 1945
MfeI	CAATTG	2 cut(s)	384, 420
MhlI	GDGCHC	4 cut(s)	545, 866, 977, 1714
MlsI	TGGCCA	2 cut(s)	630, 917
MluNI	TGGCCA	2 cut(s)	630, 917
MlyI	GAGTC	2 cut(s)	1203, 1247
MmeI	TCCRAC	1 cut(s)	1674
Mox20I	TGGCCA	2 cut(s)	630, 917
Mph1103I	ATGCAT	1 cut(s)	1753
MscI	TGGCCA	2 cut(s)	630, 917
MseI	TTAA	8 cut(s)	137, 243, 261, 521, 639, 785, 1316, 1596
MslI	CAYNNNNRTG	2 cut(s)	1668, 1815
Msp20I	TGGCCA	2 cut(s)	630, 917
MspA1I	CMGCKG	3 cut(s)	686, 1507, 1778
MspI	CCGG	2 cut(s)	999, 1878
MspR9I	CCNGG	5 cut(s)	632, 914, 1021, 1879, 1919
MunI	CAATTG	2 cut(s)	384, 420
Mva1269I	GAATGC	1 cut(s)	1083
MvaI	CCWGG	4 cut(s)	632, 914, 1021, 1919
MwoI	GCNNNNNNNGC	8 cut(s)	370, 486, 809, 929, 938, 1022, 1582, 1610
NciI	CCSGG	1 cut(s)	1879
NcoI	CCATGG	1 cut(s)	918
NdeII	GATC	5 cut(s)	614, 738, 789, 935, 1945
NlaIV	GGNNCC	3 cut(s)	594, 778, 1931
NsiI	ATGCAT	1 cut(s)	1753
NspI	RCATGY	3 cut(s)	906, 927, 1528
PaeI	GCATGC	1 cut(s)	927
PaeR7I	CTCGAG	1 cut(s)	1713
PctI	GAATGC	1 cut(s)	1083
PfeI	GAWTC	3 cut(s)	674, 1985, 2042
PflFI	GACNNNGTC	1 cut(s)	1964
PflMI	CCANNNNNTGG	1 cut(s)	425
PkrI	GCNGC	9 cut(s)	363, 537, 760, 1015, 1092, 1506, 1615, 1777, 1780
PleI	GAGTC	2 cut(s)	1202, 1246
PpsI	GAGTC	2 cut(s)	1202, 1246
PpuMI	RGGWCCY	2 cut(s)	1915, 2014
Psp124BI	GAGCTC	2 cut(s)	977, 1714
Psp1406I	AACGTT	1 cut(s)	140
Psp5II	RGGWCCY	2 cut(s)	1915, 2014
Psp6I	CCWGG	4 cut(s)	630, 912, 1019, 1917
PspEI	GGTNACC	1 cut(s)	1873
PspGI	CCWGG	4 cut(s)	630, 912, 1019, 1917
PspN4I	GGNNCC	3 cut(s)	594, 778, 1931
PspPPI	RGGWCCY	2 cut(s)	1915, 2014
PspXI	VCTCGAGB	1 cut(s)	1713
PstNI	CAGNNNCTG	2 cut(s)	1225, 1507
PsyI	GACNNNGTC	1 cut(s)	1964
PvuII	CAGCTG	2 cut(s)	1507, 1778
RsaI	GTAC	3 cut(s)	548, 1304, 1486
RsaNI	GTAC	3 cut(s)	547, 1303, 1485
RseI	CAYNNNNRTG	2 cut(s)	1668, 1815
SacI	GAGCTC	2 cut(s)	977, 1714
SalI	GTCGAC	1 cut(s)	1170
SaqAI	TTAA	8 cut(s)	137, 243, 261, 521, 639, 785, 1316, 1596
SatI	GCNGC	9 cut(s)	362, 536, 759, 1014, 1091, 1505, 1614, 1776, 1779
Sau3AI	GATC	5 cut(s)	614, 738, 789, 935, 1945
SchI	GAGTC	2 cut(s)	1203, 1247
ScrFI	CCNGG	5 cut(s)	632, 914, 1021, 1879, 1919
SduI	GDGCHC	4 cut(s)	545, 866, 977, 1714
SexAI	ACCWGGT	1 cut(s)	1917
SfaNI	GCATC	5 cut(s)	370, 1738, 1760, 1851, 2120
SfcI	CTRYAG	4 cut(s)	550, 681, 798, 1419
Sfr274I	CTCGAG	1 cut(s)	1713
SinI	GGWCC	7 cut(s)	592, 1106, 1402, 1915, 1930, 1960, 2014
SlaI	CTCGAG	1 cut(s)	1713
SmiMI	CAYNNNNRTG	2 cut(s)	1668, 1815
SmlI	CTYRAG	1 cut(s)	1713
SmoI	CTYRAG	1 cut(s)	1713
SphI	GCATGC	1 cut(s)	927
SsiI	CCGC	3 cut(s)	489, 686, 1013
SspI	AATATT	1 cut(s)	991
SspMI	CTAG	3 cut(s)	303, 1491, 1904
SstI	GAGCTC	2 cut(s)	977, 1714
StyD4I	CCNGG	5 cut(s)	630, 912, 1019, 1877, 1917
StyI	CCWWGG	1 cut(s)	918
TaaI	ACNGT	3 cut(s)	476, 551, 1572
TaiI	ACGT	2 cut(s)	143, 655
TaqI	TCGA	8 cut(s)	613, 934, 1171, 1197, 1714, 1983, 2019, 2059
TaqII	GACCGA	1 cut(s)	1094
TatI	WGTACW	2 cut(s)	1302, 1484
TauI	GCSGC	1 cut(s)	1016
TfiI	GAWTC	3 cut(s)	674, 1985, 2042
Tru1I	TTAA	8 cut(s)	137, 243, 261, 521, 639, 785, 1316, 1596
Tru9I	TTAA	8 cut(s)	137, 243, 261, 521, 639, 785, 1316, 1596
TscAI	CASTG	4 cut(s)	178, 545, 603, 1376
TseI	GCWGC	8 cut(s)	361, 535, 758, 1090, 1504, 1613, 1775, 1778
TspDTI	ATGAA	5 cut(s)	339, 817, 1116, 1481, 1652
TspGWI	ACGGA	1 cut(s)	1922
TspRI	CASTG	4 cut(s)	178, 545, 603, 1376
Tth111I	GACNNNGTC	1 cut(s)	1964
Van91I	CCANNNNNTGG	1 cut(s)	425
VpaK11BI	GGWCC	7 cut(s)	592, 1106, 1402, 1915, 1930, 1960, 2014
XapI	RAATTY	3 cut(s)	601, 1206, 1802
XceI	RCATGY	3 cut(s)	906, 927, 1528
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2074
XhoI	CTCGAG	1 cut(s)	1713
XmiI	GTMKAC	2 cut(s)	1069, 1171
XspI	CTAG	3 cut(s)	303, 1491, 1904
Zsp2I	ATGCAT	1 cut(s)	1753

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.