Rh5BG271900

RNA recognition motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0005908
Physical Location & Seq
Forward (+)
34085326 .. 34092012
6687 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG271900.1

Sequence Viewer

Length: 1689 bp
ATGGATGATTGTCTTGAAAATGATGATTCCATGTTGACCAGAGAACCAGACATTAAATATGCAGTTGATAACGTTGAAGTCGTTCATGGTTACGTGGATGAAAAAGGCTTTGATAGAAGGGATGATTCCAATGAGGATCTCAACCAGCATGAGCAACAGATTTCTCACTCACTAGATGCAGACTTCAGATATCAAATTTCAGAATCTCCGGAAAAATCTTATCATGTGCCCATTGAATCTGATCATGACAATGCCATAGAAACAAAATCTGACCTTCAAGAGAGGACTCAGTCCACATACAATGATAGTAATCATTACCAAGGTGAGATGGATGAGTTGCATGGCAGTAATTTTTTTAAAACACCCTCTCAATCTAAGTCGCAAACTTTCGATAATGAAATGGGAACTGAAGATTCTCCTAATTCACAGGAGTCTCCTCTGACAGAAGATAAGAACCAGGGAGCCGGAGATTCTGACTTGGTTGGGTCACCTCGTAAAGGAAGAGCAAGGAATATCAGCTCAGAGAAGTTACAAGATGATTCAATTACATCTTCCATTCATGAAATAGAAAAGGAAGCTACTGATATACAAACATGGCAGTCATTATCTTCTCCTAAACCCCACTGGTTAAATAATAAACCTAACGAAGATGACTCCTCGGGTGAGAACAGAATACGAGGAGTACCCCAGTCTGACCTTCAATTTCTTGGAAGATCAGCCGGAGGATCAATTTCTCCAGTGACTAGGAGACAAATGTCAATTTCACCTGAAGGGTCTCCTTTGCCACTTCACTCTCTCCATGACAGTAGGCATATATCTTCTCAGCAAGGTTCTCCAGACCCATCATATGAACCTCAATCTCATAGACAGAGAGTTTCTTCACCTCAAAGGTCTGACATGCATACAGGAGTTTTCCCTGGTCATTTATCTCCTGTGAGGCAAACCTCTGTTTCTACACATGACATTCGGCAAGAGCCCCTGCAAGACAGTTTTGCAGTGAAGCACATATCTGCATCCCTAAAGTCCCATCACTCGCATCCAAAGTATCGGAAAAGGGACAGATCAGAGTCACGATCACCCACTCAGCATAGAGATTCACCCACTAGGCAGAGAGGTTCACCGTCTCGGCACAGAGGTTCTCCTACTGGTCATAGAGATTCACCCACTCGGCATAGAGATTCTTATGCCTACCAGAGAGATTATCGTGATAGATTTCGATCAAGGTCCCCATATTCAAAATCCCATCATAGATCAAGGTCCCCTTATTCAAGAGCCCATAATAGATCGAGATCCCCTTATTCAAGAGCCCATCATAGATCGACAAGGCGAAGGCAATCTCCAAGGCGCCGGTCCCCTTTTCCTGAATATCATAATTATCATCGCCGGTCTCCTAGAAGGACACCTTGGTCACCACCTCCTAATAGGAAAACCGGATTAGGGAGACCTGGTAGAAATTTATTTGTTGCAGGTTTCAGCTTCTTAACTACAGAGAGAGATTTGGAAAGGAAGTTCTCTAGGTATGGCCGAATACAAGATGTTCGCATTGTCAGAGACAAGAGGTCCGGAGATTCACGTGGATTTGGGTTTTTGACCTTGGAAAGTGATGAAGACGCTGATGCGGCAATCAGGGCTCTAGATGAGACTGAGTGGAATGGTCGGATTATTCTGGTGGAAAAATCGAAAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

562

Amino Acids

64.58

Weight (kDa)

8.99

Isoelectric Point (pI)

89.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 486 - 555 6.9e-17 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1405
Acc36I ACCTGC 1 cut(s) 1457
AccB1I GGYRCC 1 cut(s) 1344
AccIII TCCGGA 2 cut(s) 208, 1562
AciI CCGC 1 cut(s) 1619
AclI AACGTT 1 cut(s) 72
AclWI GGATC 3 cut(s) 144, 733, 1284
AcoI YGGCCR 1 cut(s) 1522
AcsI RAATTY 2 cut(s) 195, 1453
AcuI CTGAAG 3 cut(s) 169, 429, 789
AcvI CACGTG 1 cut(s) 1574
AcyI GRCGYC 1 cut(s) 1345
AfaI GTAC 1 cut(s) 684
AfiI CCNNNNNNNGG 2 cut(s) 497, 1437
AgsI TTSAA 9 cut(s) 17, 77, 236, 278, 543, 701, 1236, 1269, 1302
AhdI GACNNNNNGTC 1 cut(s) 1558
AjnI CCWGG 3 cut(s) 456, 916, 1444
AjuI GAANNNNNNNTTGG 2 cut(s) 1387, 1419
AloI GAACNNNNNNTCC 2 cut(s) 1493, 1525
AluBI AGCT 3 cut(s) 519, 578, 1476
AluI AGCT 3 cut(s) 519, 578, 1476
Alw26I GTCTC 8 cut(s) 438, 742, 780, 1128, 1392, 1435, 1545, 1634
AlwI GGATC 3 cut(s) 144, 733, 1284
Ama87I CYCGRG 1 cut(s) 658
Aor13HI TCCGGA 2 cut(s) 208, 1562
AoxI GGCC 1 cut(s) 1522
ApoI RAATTY 2 cut(s) 195, 1453
Asp700I GAANNNNTTC 1 cut(s) 81
AspLEI GCGC 1 cut(s) 1347
AspS9I GGNCC 4 cut(s) 1224, 1257, 1350, 1560
AvaI CYCGRG 1 cut(s) 658
AvaII GGWCC 4 cut(s) 1224, 1257, 1350, 1560
BaeGI GKGCMC 1 cut(s) 231
BanI GGYRCC 1 cut(s) 1344
BanII GRGCYC 4 cut(s) 978, 1276, 1309, 1633
BbrPI CACGTG 1 cut(s) 1574
BbsI GAAGAC 1 cut(s) 1614
BccI CCATC 5 cut(s) 322, 850, 1035, 1251, 1317
BciT130I CCWGG 3 cut(s) 458, 918, 1446
BclI TGATCA 1 cut(s) 241
BcoDI GTCTC 8 cut(s) 438, 742, 780, 1128, 1392, 1435, 1545, 1634
BfaI CTAG 6 cut(s) 173, 744, 1104, 1392, 1515, 1634
BfmI CTRYAG 1 cut(s) 1485
BfoI RGCGCY 1 cut(s) 1348
BfuAI ACCTGC 1 cut(s) 1457
BisI GCNGC 1 cut(s) 1620
BlsI GCNGC 1 cut(s) 1621
Bme1390I CCNGG 3 cut(s) 458, 918, 1446
Bme18I GGWCC 4 cut(s) 1224, 1257, 1350, 1560
BmeRI GACNNNNNGTC 1 cut(s) 1558
BmeT110I CYCGRG 1 cut(s) 658
BmgT120I GGNCC 4 cut(s) 1224, 1257, 1350, 1560
BmiI GGNNCC 5 cut(s) 463, 1226, 1259, 1346, 1352
BmrFI CCNGG 3 cut(s) 458, 918, 1446
BmrI ACTGGG 1 cut(s) 682
BmsI GCATC 4 cut(s) 166, 1022, 1045, 1606
BmuI ACTGGG 1 cut(s) 682
BoxI GACNNNNGTC 1 cut(s) 754
BpiI GAAGAC 1 cut(s) 1614
BpmI CTGGAG 2 cut(s) 720, 819
BsaAI YACGTR 2 cut(s) 94, 1574
BsaBI GATNNNNATC 3 cut(s) 309, 1216, 1288
BsaHI GRCGYC 1 cut(s) 1345
BsaI GGTCTC 3 cut(s) 780, 1392, 1435
BsaJI CCNNGG 7 cut(s) 319, 457, 657, 916, 1340, 1403, 1593
BsaWI WCCGGW 3 cut(s) 208, 1430, 1562
BsaXI ACNNNNNCTCC 2 cut(s) 1432, 1462
Bsc4I CCNNNNNNNGG 2 cut(s) 497, 1437
Bse118I RCCGGY 2 cut(s) 1347, 1383
Bse1I ACTGG 4 cut(s) 629, 688, 737, 1150
Bse8I GATNNNNATC 3 cut(s) 309, 1216, 1288
BseAI TCCGGA 2 cut(s) 208, 1562
BseBI CCWGG 3 cut(s) 458, 918, 1446
BseDI CCNNGG 7 cut(s) 319, 457, 657, 916, 1340, 1403, 1593
BseGI GGATG 6 cut(s) 10, 103, 127, 337, 1013, 1036
BseJI GATNNNNATC 3 cut(s) 309, 1216, 1288
BseLI CCNNNNNNNGG 2 cut(s) 497, 1437
BseMII CTCAG 5 cut(s) 302, 534, 836, 1097, 1635
BseNI ACTGG 4 cut(s) 629, 688, 737, 1150
BseRI GAGGAG 3 cut(s) 426, 646, 693
BseSI GKGCMC 1 cut(s) 231
BshFI GGCC 1 cut(s) 1524
BshNI GGYRCC 1 cut(s) 1344
BsiHKCI CYCGRG 1 cut(s) 658
BsiSI CCGG 7 cut(s) 209, 465, 720, 1348, 1384, 1431, 1563
BslFI GGGAC 5 cut(s) 1009, 1070, 1210, 1243, 1336
BslI CCNNNNNNNGG 2 cut(s) 497, 1437
BsmAI GTCTC 8 cut(s) 438, 742, 780, 1128, 1392, 1435, 1545, 1634
BsmBI CGTCTC 1 cut(s) 1128
BsmFI GGGAC 5 cut(s) 1009, 1070, 1210, 1243, 1336
BsnI GGCC 1 cut(s) 1524
Bso31I GGTCTC 3 cut(s) 780, 1392, 1435
BsoBI CYCGRG 1 cut(s) 658
Bsp1286I GDGCHC 5 cut(s) 231, 978, 1276, 1309, 1633
Bsp13I TCCGGA 2 cut(s) 208, 1562
BspACI CCGC 1 cut(s) 1619
BspANI GGCC 1 cut(s) 1524
BspCNI CTCAG 5 cut(s) 301, 533, 835, 1096, 1636
BspEI TCCGGA 2 cut(s) 208, 1562
BspHI TCATGA 2 cut(s) 244, 559
BspLI GGNNCC 5 cut(s) 463, 1226, 1259, 1346, 1352
BspMI ACCTGC 1 cut(s) 1457
BspPI GGATC 3 cut(s) 144, 733, 1284
BspQI GCTCTTC 1 cut(s) 496
BspT107I GGYRCC 1 cut(s) 1344
BspTNI GGTCTC 3 cut(s) 780, 1392, 1435
BsrFI RCCGGY 2 cut(s) 1347, 1383
BsrI ACTGG 4 cut(s) 629, 688, 737, 1150
BssAI RCCGGY 2 cut(s) 1347, 1383
BssECI CCNNGG 7 cut(s) 319, 457, 657, 916, 1340, 1403, 1593
BssNI GRCGYC 1 cut(s) 1345
BssT1I CCWWGG 4 cut(s) 319, 1340, 1403, 1593
Bst2UI CCWGG 3 cut(s) 458, 918, 1446
Bst4CI ACNGT 3 cut(s) 806, 989, 1122
Bst6I CTCTTC 1 cut(s) 496
BstACI GRCGYC 1 cut(s) 1345
BstBAI YACGTR 2 cut(s) 94, 1574
BstDEI CTNAG 6 cut(s) 288, 375, 520, 822, 1083, 1644
BstEII GGTNACC 2 cut(s) 486, 1407
BstENI CCTNNNNNAGG 1 cut(s) 495
BstF5I GGATG 6 cut(s) 10, 103, 127, 337, 1013, 1036
BstH2I RGCGCY 1 cut(s) 1348
BstHHI GCGC 1 cut(s) 1347
BstMAI GTCTC 8 cut(s) 438, 742, 780, 1128, 1392, 1435, 1545, 1634
BstMWI GCNNNNNNNGC 2 cut(s) 1619, 1628
BstNI CCWGG 3 cut(s) 458, 918, 1446
BstNSI RCATGY 1 cut(s) 901
BstPAI GACNNNNGTC 1 cut(s) 754
BstPI GGTNACC 2 cut(s) 486, 1407
BstSCI CCNGG 3 cut(s) 456, 916, 1444
BstSFI CTRYAG 1 cut(s) 1485
BstSLI GKGCMC 1 cut(s) 231
BstV2I GAAGAC 1 cut(s) 1614
BstX2I RGATCY 2 cut(s) 136, 1289
BstYI RGATCY 2 cut(s) 136, 1289
BsuRI GGCC 1 cut(s) 1524
BtgZI GCGATG 1 cut(s) 1364
BtsCI GGATG 6 cut(s) 10, 103, 127, 337, 1013, 1036
BtsI GCAGTG 1 cut(s) 1002
BtsIMutI CAGTG 3 cut(s) 622, 744, 1002
BveI ACCTGC 1 cut(s) 1457
CciI TCATGA 2 cut(s) 244, 559
CfoI GCGC 1 cut(s) 1347
Cfr10I RCCGGY 2 cut(s) 1347, 1383
Cfr13I GGNCC 4 cut(s) 1224, 1257, 1350, 1560
CseI GACGC 1 cut(s) 1619
CsiI ACCWGGT 1 cut(s) 1444
Csp6I GTAC 1 cut(s) 683
CviQI GTAC 1 cut(s) 683
DdeI CTNAG 6 cut(s) 288, 375, 520, 822, 1083, 1644
DinI GGCGCC 1 cut(s) 1346
DraI TTTAAA 1 cut(s) 358
DrdI GACNNNNNNGTC 1 cut(s) 1405
DriI GACNNNNNGTC 1 cut(s) 1558
DseDI GACNNNNNNGTC 1 cut(s) 1405
EaeI YGGCCR 1 cut(s) 1522
Eam1104I CTCTTC 1 cut(s) 496
Eam1105I GACNNNNNGTC 1 cut(s) 1558
EarI CTCTTC 1 cut(s) 496
Eco130I CCWWGG 4 cut(s) 319, 1340, 1403, 1593
Eco24I GRGCYC 4 cut(s) 978, 1276, 1309, 1633
Eco31I GGTCTC 3 cut(s) 780, 1392, 1435
Eco32I GATATC 1 cut(s) 191
Eco47I GGWCC 4 cut(s) 1224, 1257, 1350, 1560
Eco57I CTGAAG 3 cut(s) 169, 429, 789
Eco72I CACGTG 1 cut(s) 1574
Eco88I CYCGRG 1 cut(s) 658
Eco91I GGTNACC 2 cut(s) 486, 1407
EcoNI CCTNNNNNAGG 1 cut(s) 495
EcoO109I RGGNCCY 2 cut(s) 1224, 1257
EcoO65I GGTNACC 2 cut(s) 486, 1407
EcoRII CCWGG 3 cut(s) 456, 916, 1444
EcoRV GATATC 1 cut(s) 191
EcoT14I CCWWGG 4 cut(s) 319, 1340, 1403, 1593
EcoT22I ATGCAT 1 cut(s) 903
EcoT38I GRGCYC 4 cut(s) 978, 1276, 1309, 1633
EgeI GGCGCC 1 cut(s) 1346
EheI GGCGCC 1 cut(s) 1346
ErhI CCWWGG 4 cut(s) 319, 1340, 1403, 1593
Esp3I CGTCTC 1 cut(s) 1128
FalI AAGNNNNNCTT 4 cut(s) 1246, 1278, 1387, 1419
FaqI GGGAC 5 cut(s) 1009, 1070, 1210, 1243, 1336
FauNDI CATATG 1 cut(s) 847
FbaI TGATCA 1 cut(s) 241
Fnu4HI GCNGC 1 cut(s) 1620
FokI GGATG 6 cut(s) 17, 110, 134, 344, 1000, 1023
FriOI GRGCYC 4 cut(s) 978, 1276, 1309, 1633
Fsp4HI GCNGC 1 cut(s) 1620
FspBI CTAG 6 cut(s) 173, 744, 1104, 1392, 1515, 1634
GlaI GCGC 1 cut(s) 1346
GluI GCNGC 1 cut(s) 1620
GsuI CTGGAG 2 cut(s) 720, 819
HaeII RGCGCY 1 cut(s) 1348
HaeIII GGCC 1 cut(s) 1524
HapII CCGG 7 cut(s) 209, 465, 720, 1348, 1384, 1431, 1563
HgaI GACGC 1 cut(s) 1619
HhaI GCGC 1 cut(s) 1347
Hin1I GRCGYC 1 cut(s) 1345
Hin6I GCGC 1 cut(s) 1345
HinP1I GCGC 1 cut(s) 1345
HincII GTYRAC 1 cut(s) 36
HindII GTYRAC 1 cut(s) 36
HpaII CCGG 7 cut(s) 209, 465, 720, 1348, 1384, 1431, 1563
Hpy166II GTNNAC 3 cut(s) 36, 294, 1118
Hpy8I GTNNAC 3 cut(s) 36, 294, 1118
HpyAV CCTTC 6 cut(s) 111, 284, 707, 764, 1323, 1389
HpyCH4III ACNGT 3 cut(s) 806, 989, 1122
HpyCH4IV ACGT 3 cut(s) 72, 93, 1573
HpyCH4V TGCA 8 cut(s) 62, 179, 340, 901, 982, 995, 1013, 1466
HpyF10VI GCNNNNNNNGC 2 cut(s) 1619, 1628
HpyF3I CTNAG 6 cut(s) 288, 375, 520, 822, 1083, 1644
HpySE526I ACGT 3 cut(s) 72, 93, 1573
Hsp92I GRCGYC 1 cut(s) 1345
HspAI GCGC 1 cut(s) 1345
KasI GGCGCC 1 cut(s) 1344
Kpn2I TCCGGA 2 cut(s) 208, 1562
Ksp22I TGATCA 1 cut(s) 241
LguI GCTCTTC 1 cut(s) 496
LmnI GCTCC 1 cut(s) 461
LweI GCATC 4 cut(s) 166, 1022, 1045, 1606
MabI ACCWGGT 1 cut(s) 1444
MaeI CTAG 6 cut(s) 173, 744, 1104, 1392, 1515, 1634
MaeII ACGT 3 cut(s) 72, 93, 1573
MaeIII GTNAC 6 cut(s) 89, 486, 528, 739, 1068, 1407
MflI RGATCY 2 cut(s) 136, 1289
MhlI GDGCHC 5 cut(s) 231, 978, 1276, 1309, 1633
MluCI AATT 9 cut(s) 195, 349, 421, 543, 701, 729, 759, 1372, 1453
Mly113I GGCGCC 1 cut(s) 1345
MlyI GAGTC 4 cut(s) 280, 440, 647, 1076
MmeI TCCRAC 1 cut(s) 1637
Mph1103I ATGCAT 1 cut(s) 903
MroI TCCGGA 2 cut(s) 208, 1562
MroXI GAANNNNTTC 1 cut(s) 81
MseI TTAA 4 cut(s) 54, 357, 629, 1481
MslI CAYNNNNRTG 1 cut(s) 249
MspI CCGG 7 cut(s) 209, 465, 720, 1348, 1384, 1431, 1563
MspR9I CCNGG 3 cut(s) 458, 918, 1446
MvaI CCWGG 3 cut(s) 458, 918, 1446
MwoI GCNNNNNNNGC 2 cut(s) 1619, 1628
NarI GGCGCC 1 cut(s) 1345
NdeI CATATG 1 cut(s) 847
NlaIV GGNNCC 5 cut(s) 463, 1226, 1259, 1346, 1352
NmeAIII GCCGAG 2 cut(s) 1105, 1147
NmuCI GTSAC 4 cut(s) 486, 739, 1068, 1407
NsiI ATGCAT 1 cut(s) 903
NspI RCATGY 1 cut(s) 901
PagI TCATGA 2 cut(s) 244, 559
PciSI GCTCTTC 1 cut(s) 496
PcsI WCGNNNNNNNCGW 1 cut(s) 78
PdmI GAANNNNTTC 1 cut(s) 81
PflFI GACNNNGTC 1 cut(s) 289
PkrI GCNGC 1 cut(s) 1621
PleI GAGTC 4 cut(s) 280, 439, 647, 1075
PluTI GGCGCC 1 cut(s) 1348
PmaCI CACGTG 1 cut(s) 1574
PmlI CACGTG 1 cut(s) 1574
PpsI GAGTC 4 cut(s) 280, 439, 647, 1075
Ppu21I YACGTR 2 cut(s) 94, 1574
PpuMI RGGWCCY 2 cut(s) 1224, 1257
PshAI GACNNNNGTC 1 cut(s) 754
Psp1406I AACGTT 1 cut(s) 72
Psp5II RGGWCCY 2 cut(s) 1224, 1257
Psp6I CCWGG 3 cut(s) 456, 916, 1444
PspCI CACGTG 1 cut(s) 1574
PspEI GGTNACC 2 cut(s) 486, 1407
PspGI CCWGG 3 cut(s) 456, 916, 1444
PspN4I GGNNCC 5 cut(s) 463, 1226, 1259, 1346, 1352
PspPI GGNCC 4 cut(s) 1224, 1257, 1350, 1560
PspPPI RGGWCCY 2 cut(s) 1224, 1257
PsuI RGATCY 2 cut(s) 136, 1289
PsyI GACNNNGTC 1 cut(s) 289
RsaI GTAC 1 cut(s) 684
RsaNI GTAC 1 cut(s) 683
RseI CAYNNNNRTG 1 cut(s) 249
SapI GCTCTTC 1 cut(s) 496
SaqAI TTAA 4 cut(s) 54, 357, 629, 1481
SatI GCNGC 1 cut(s) 1620
Sau96I GGNCC 4 cut(s) 1224, 1257, 1350, 1560
SchI GAGTC 4 cut(s) 280, 440, 647, 1076
ScrFI CCNGG 3 cut(s) 458, 918, 1446
SduI GDGCHC 5 cut(s) 231, 978, 1276, 1309, 1633
SexAI ACCWGGT 1 cut(s) 1444
SfaNI GCATC 4 cut(s) 166, 1022, 1045, 1606
SfcI CTRYAG 1 cut(s) 1485
SfoI GGCGCC 1 cut(s) 1346
SinI GGWCC 4 cut(s) 1224, 1257, 1350, 1560
SmiMI CAYNNNNRTG 1 cut(s) 249
Sse9I AATT 9 cut(s) 195, 349, 421, 543, 701, 729, 759, 1372, 1453
SsiI CCGC 1 cut(s) 1619
SspDI GGCGCC 1 cut(s) 1344
SspMI CTAG 6 cut(s) 173, 744, 1104, 1392, 1515, 1634
StyD4I CCNGG 3 cut(s) 456, 916, 1444
StyI CCWWGG 4 cut(s) 319, 1340, 1403, 1593
TaaI ACNGT 3 cut(s) 806, 989, 1122
TaiI ACGT 3 cut(s) 75, 96, 1576
TaqI TCGA 5 cut(s) 390, 1216, 1286, 1319, 1679
TasI AATT 9 cut(s) 195, 349, 421, 543, 701, 729, 759, 1372, 1453
TauI GCSGC 1 cut(s) 1622
Tru1I TTAA 4 cut(s) 54, 357, 629, 1481
Tru9I TTAA 4 cut(s) 54, 357, 629, 1481
TscAI CASTG 3 cut(s) 629, 744, 1002
TseFI GTSAC 4 cut(s) 486, 739, 1068, 1407
Tsp45I GTSAC 4 cut(s) 486, 739, 1068, 1407
TspDTI ATGAA 7 cut(s) 74, 114, 411, 548, 576, 864, 1620
TspRI CASTG 3 cut(s) 629, 744, 1002
Tth111I GACNNNGTC 1 cut(s) 289
VpaK11BI GGWCC 4 cut(s) 1224, 1257, 1350, 1560
XagI CCTNNNNNAGG 1 cut(s) 495
XapI RAATTY 2 cut(s) 195, 1453
XbaI TCTAGA 1 cut(s) 1633
XceI RCATGY 1 cut(s) 901
XmnI GAANNNNTTC 1 cut(s) 81
XspI CTAG 6 cut(s) 173, 744, 1104, 1392, 1515, 1634
Zsp2I ATGCAT 1 cut(s) 903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.