Rw5G025010

RNA recognition motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0005908
Physical Location & Seq
Forward (+)
35507384 .. 35511821
4438 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G025010.1

Sequence Viewer

Length: 1686 bp
ATGGATGATTGTCTTGAAAATGATGATTCCATGTTGACCAGAGAACCAGACATTAAATATGCAGTTGATAACGTTGAAGTCGTTCATGGTTACGTGGATCAAAAAGGCTTTGATAGAAGGGATGATTCCAATGAGGATCTCAACCAGCATGAGCAACAGATTTCTCACTCACTAGATGCAGACTTCAGAGATCAAATTTCAGAATCTCCGGAAAAATCTTATCACGTGCCCATTGAATCTGATCATGACAATGCCATAGAAACAAAATCTGACCTTCAAGAGAGGACTCAGTCCACATACAATGATAGTAATCATTACCAAGGTGAGATGGATGAGTTGCATGGCAGTAATTTTTTTAAAACCTCCTCTCAATCTAAGTCGCAAACTTTCGATAATGAAATGGGAACTGAAGATTCTCCTAATTCACAGGAGTCTCTGACAGAAAATAAGAACCAGGGAGCCGGAGATTCTGACTTGGTTAGGTCACCTCGTACTGGAAGAGCAAGGAATATCAGCTCAGAGAAGTTACAAGATGATTCAATTACATCTTCCATTCATGAAATAGAAAAGGAAGCTACTGATATACAAACATGGCAGTCATTATCTTCTCCTAAATCCCACTGGTTAAATAATAAACCTAACGAAGATGACTCCTCGGGTGAGAACAGAATACGAGGAGTACCCCAGTCTGACCTTCAATTTCTTGGAAGATCAGCCGGAGGATCAATTTCTCCAGTTACTAGGAGACAAATGTCAATTTCACCTGAAGGGTCTCCTTTGCCACTTCACTCTCTCCATGACAGTAAGCATATATCTTCTCAGCAAGGTTCTCCAGACACATCATATGAACCTCAATCTCATAGACAGAGAGTTTCTTCACCTCAAAGGTCTGACATGCATACAGGAGTTTTCCCTGGTCATTTATCTCCTGTGAGGCAAACCTCTGTTTCTACACATGACATTCGGCAAGAGCCCCTGCAAGACAGTTTTGCAGTGAAGCACTTATCTGCATCCCCAAAGTCCCATGACTCGCATCCAAAGTATCGGAAAAGGGACAGATCAGAGTCACGATCACCCACTCAGCATAGAGATTCACCCACTAGGCAGAGAGGTTCGCCGTCTCGGCACAGAGGTTCTCCTACTGGTCATAGAGATGCACCCACTCGGCATAGAGATTCTTATGCCTACCAGAGAGATTATCGTGATAGATTTCGATCAAGGTCCCCATATTCAAAATCCCATCATAGATCAAGGTCCCCTTATTCAAGAGCCCATAATAGATCAAGATCCCCTTATTCAAGAGACCATCATAGATCGACAAGGCGAAGGCAATCTCCAAGGCGCCGGTCCCCTTTTCCTGAATGTCATAATTATCATCGCCGGTCTCCTAGAAGGACACCTTGGTCACCACCTCCTAATAGGAAAACCGGATTAGGGAGACCTGGTAGAAATTTATTTGTTGCAGGTTTCAGCTTCTTAACTACAGAGAGAGATTTGGAAAGGAAGTTCTCTAGGTATGGCCGAATACAAGACGTTCGTATTGTTAGAGACAAGAGGTCCGGAGATTCACGTGGATTTGGGTTTTTGACCTTGGAAAGTGATGAAGACGCTGATGCGGCAATCAGGGCTCTAGATGAGACTGAGTGGAATGGTCGGATTATTCTGGTGGAAAAATCAAAAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

561

Amino Acids

64.39

Weight (kDa)

8.81

Isoelectric Point (pI)

90.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 485 - 554 6.9e-17 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1402
Acc36I ACCTGC 1 cut(s) 1454
AccB1I GGYRCC 1 cut(s) 1341
AccIII TCCGGA 2 cut(s) 208, 1559
AciI CCGC 1 cut(s) 1616
AclI AACGTT 1 cut(s) 72
AclWI GGATC 4 cut(s) 105, 144, 730, 1281
AcoI YGGCCR 1 cut(s) 1519
AcsI RAATTY 2 cut(s) 195, 1450
AcuI CTGAAG 3 cut(s) 169, 429, 786
AcvI CACGTG 2 cut(s) 226, 1571
AcyI GRCGYC 1 cut(s) 1342
AfaI GTAC 2 cut(s) 493, 681
AfiI CCNNNNNNNGG 2 cut(s) 494, 1434
AgsI TTSAA 9 cut(s) 17, 77, 236, 278, 540, 698, 1233, 1266, 1299
AhdI GACNNNNNGTC 1 cut(s) 1555
AjnI CCWGG 3 cut(s) 453, 913, 1441
AjuI GAANNNNNNNTTGG 2 cut(s) 1384, 1416
AloI GAACNNNNNNTCC 2 cut(s) 1490, 1522
AluBI AGCT 3 cut(s) 516, 575, 1473
AluI AGCT 3 cut(s) 516, 575, 1473
Alw26I GTCTC 9 cut(s) 438, 739, 777, 1125, 1296, 1389, 1432, 1542, 1631
AlwI GGATC 4 cut(s) 105, 144, 730, 1281
Ama87I CYCGRG 1 cut(s) 655
Aor13HI TCCGGA 2 cut(s) 208, 1559
AoxI GGCC 1 cut(s) 1519
ApoI RAATTY 2 cut(s) 195, 1450
Asp700I GAANNNNTTC 1 cut(s) 81
AspLEI GCGC 1 cut(s) 1344
AspS9I GGNCC 4 cut(s) 1221, 1254, 1347, 1557
AsuHPI GGTGA 8 cut(s) 335, 477, 671, 753, 870, 1065, 1086, 1398
AvaI CYCGRG 1 cut(s) 655
AvaII GGWCC 4 cut(s) 1221, 1254, 1347, 1557
BaeGI GKGCMC 1 cut(s) 231
BanI GGYRCC 1 cut(s) 1341
BanII GRGCYC 3 cut(s) 975, 1273, 1630
BbrPI CACGTG 2 cut(s) 226, 1571
BbsI GAAGAC 1 cut(s) 1611
BccI CCATC 3 cut(s) 322, 1248, 1314
BceAI ACGGC 1 cut(s) 1102
BciT130I CCWGG 3 cut(s) 455, 915, 1443
BclI TGATCA 1 cut(s) 241
BcoDI GTCTC 9 cut(s) 438, 739, 777, 1125, 1296, 1389, 1432, 1542, 1631
BfaI CTAG 6 cut(s) 173, 741, 1101, 1389, 1512, 1631
BfmI CTRYAG 1 cut(s) 1482
BfoI RGCGCY 1 cut(s) 1345
BfuAI ACCTGC 1 cut(s) 1454
BglI GCCNNNNNGGC 1 cut(s) 1123
BisI GCNGC 1 cut(s) 1617
BlsI GCNGC 1 cut(s) 1618
Bme1390I CCNGG 3 cut(s) 455, 915, 1443
Bme18I GGWCC 4 cut(s) 1221, 1254, 1347, 1557
BmeRI GACNNNNNGTC 1 cut(s) 1555
BmeT110I CYCGRG 1 cut(s) 655
BmgT120I GGNCC 4 cut(s) 1221, 1254, 1347, 1557
BmiI GGNNCC 5 cut(s) 460, 1223, 1256, 1343, 1349
BmrFI CCNGG 3 cut(s) 455, 915, 1443
BmrI ACTGGG 1 cut(s) 679
BmsI GCATC 5 cut(s) 166, 1019, 1042, 1144, 1603
BmuI ACTGGG 1 cut(s) 679
BoxI GACNNNNGTC 1 cut(s) 751
BpiI GAAGAC 1 cut(s) 1611
BpmI CTGGAG 2 cut(s) 717, 816
BsaAI YACGTR 3 cut(s) 94, 226, 1571
BsaBI GATNNNNATC 3 cut(s) 309, 1213, 1285
BsaHI GRCGYC 1 cut(s) 1342
BsaI GGTCTC 4 cut(s) 777, 1296, 1389, 1432
BsaJI CCNNGG 7 cut(s) 319, 454, 654, 913, 1337, 1400, 1590
BsaWI WCCGGW 3 cut(s) 208, 1427, 1559
BsaXI ACNNNNNCTCC 2 cut(s) 1429, 1459
Bsc4I CCNNNNNNNGG 2 cut(s) 494, 1434
Bse118I RCCGGY 2 cut(s) 1344, 1380
Bse1I ACTGG 5 cut(s) 499, 626, 685, 734, 1147
Bse8I GATNNNNATC 3 cut(s) 309, 1213, 1285
BseAI TCCGGA 2 cut(s) 208, 1559
BseBI CCWGG 3 cut(s) 455, 915, 1443
BseDI CCNNGG 7 cut(s) 319, 454, 654, 913, 1337, 1400, 1590
BseGI GGATG 5 cut(s) 10, 127, 337, 1010, 1033
BseJI GATNNNNATC 3 cut(s) 309, 1213, 1285
BseLI CCNNNNNNNGG 2 cut(s) 494, 1434
BseMII CTCAG 5 cut(s) 302, 531, 833, 1094, 1632
BseNI ACTGG 5 cut(s) 499, 626, 685, 734, 1147
BseRI GAGGAG 3 cut(s) 355, 643, 690
BseSI GKGCMC 1 cut(s) 231
BshFI GGCC 1 cut(s) 1521
BshNI GGYRCC 1 cut(s) 1341
BsiHKCI CYCGRG 1 cut(s) 655
BsiSI CCGG 7 cut(s) 209, 462, 717, 1345, 1381, 1428, 1560
BslFI GGGAC 5 cut(s) 1006, 1067, 1207, 1240, 1333
BslI CCNNNNNNNGG 2 cut(s) 494, 1434
BsmAI GTCTC 9 cut(s) 438, 739, 777, 1125, 1296, 1389, 1432, 1542, 1631
BsmBI CGTCTC 1 cut(s) 1125
BsmFI GGGAC 5 cut(s) 1006, 1067, 1207, 1240, 1333
BsnI GGCC 1 cut(s) 1521
Bso31I GGTCTC 4 cut(s) 777, 1296, 1389, 1432
BsoBI CYCGRG 1 cut(s) 655
Bsp1286I GDGCHC 4 cut(s) 231, 975, 1273, 1630
Bsp13I TCCGGA 2 cut(s) 208, 1559
BspACI CCGC 1 cut(s) 1616
BspANI GGCC 1 cut(s) 1521
BspCNI CTCAG 5 cut(s) 301, 530, 832, 1093, 1633
BspEI TCCGGA 2 cut(s) 208, 1559
BspHI TCATGA 2 cut(s) 244, 556
BspLI GGNNCC 5 cut(s) 460, 1223, 1256, 1343, 1349
BspMI ACCTGC 1 cut(s) 1454
BspPI GGATC 4 cut(s) 105, 144, 730, 1281
BspQI GCTCTTC 1 cut(s) 493
BspT107I GGYRCC 1 cut(s) 1341
BspTNI GGTCTC 4 cut(s) 777, 1296, 1389, 1432
BsrFI RCCGGY 2 cut(s) 1344, 1380
BsrI ACTGG 5 cut(s) 499, 626, 685, 734, 1147
BssAI RCCGGY 2 cut(s) 1344, 1380
BssECI CCNNGG 7 cut(s) 319, 454, 654, 913, 1337, 1400, 1590
BssNI GRCGYC 1 cut(s) 1342
BssT1I CCWWGG 4 cut(s) 319, 1337, 1400, 1590
Bst2UI CCWGG 3 cut(s) 455, 915, 1443
Bst4CI ACNGT 2 cut(s) 803, 986
Bst6I CTCTTC 1 cut(s) 493
BstACI GRCGYC 1 cut(s) 1342
BstBAI YACGTR 3 cut(s) 94, 226, 1571
BstDEI CTNAG 6 cut(s) 288, 375, 517, 819, 1080, 1641
BstEII GGTNACC 2 cut(s) 483, 1404
BstF5I GGATG 5 cut(s) 10, 127, 337, 1010, 1033
BstH2I RGCGCY 1 cut(s) 1345
BstHHI GCGC 1 cut(s) 1344
BstMAI GTCTC 9 cut(s) 438, 739, 777, 1125, 1296, 1389, 1432, 1542, 1631
BstMWI GCNNNNNNNGC 3 cut(s) 1123, 1616, 1625
BstNI CCWGG 3 cut(s) 455, 915, 1443
BstNSI RCATGY 1 cut(s) 898
BstPAI GACNNNNGTC 1 cut(s) 751
BstPI GGTNACC 2 cut(s) 483, 1404
BstSCI CCNGG 3 cut(s) 453, 913, 1441
BstSFI CTRYAG 1 cut(s) 1482
BstSLI GKGCMC 1 cut(s) 231
BstV2I GAAGAC 1 cut(s) 1611
BstX2I RGATCY 2 cut(s) 136, 1286
BstYI RGATCY 2 cut(s) 136, 1286
BsuRI GGCC 1 cut(s) 1521
BtgZI GCGATG 1 cut(s) 1361
BtsCI GGATG 5 cut(s) 10, 127, 337, 1010, 1033
BtsI GCAGTG 1 cut(s) 999
BtsIMutI CAGTG 2 cut(s) 619, 999
BveI ACCTGC 1 cut(s) 1454
CciI TCATGA 2 cut(s) 244, 556
CfoI GCGC 1 cut(s) 1344
Cfr10I RCCGGY 2 cut(s) 1344, 1380
Cfr13I GGNCC 4 cut(s) 1221, 1254, 1347, 1557
CseI GACGC 1 cut(s) 1616
CsiI ACCWGGT 1 cut(s) 1441
Csp6I GTAC 2 cut(s) 492, 680
CviQI GTAC 2 cut(s) 492, 680
DdeI CTNAG 6 cut(s) 288, 375, 517, 819, 1080, 1641
DinI GGCGCC 1 cut(s) 1343
DraI TTTAAA 1 cut(s) 358
DrdI GACNNNNNNGTC 1 cut(s) 1402
DriI GACNNNNNGTC 1 cut(s) 1555
DseDI GACNNNNNNGTC 1 cut(s) 1402
EaeI YGGCCR 1 cut(s) 1519
Eam1104I CTCTTC 1 cut(s) 493
Eam1105I GACNNNNNGTC 1 cut(s) 1555
EarI CTCTTC 1 cut(s) 493
Eco130I CCWWGG 4 cut(s) 319, 1337, 1400, 1590
Eco24I GRGCYC 3 cut(s) 975, 1273, 1630
Eco31I GGTCTC 4 cut(s) 777, 1296, 1389, 1432
Eco47I GGWCC 4 cut(s) 1221, 1254, 1347, 1557
Eco57I CTGAAG 3 cut(s) 169, 429, 786
Eco72I CACGTG 2 cut(s) 226, 1571
Eco88I CYCGRG 1 cut(s) 655
Eco91I GGTNACC 2 cut(s) 483, 1404
EcoO109I RGGNCCY 2 cut(s) 1221, 1254
EcoO65I GGTNACC 2 cut(s) 483, 1404
EcoRII CCWGG 3 cut(s) 453, 913, 1441
EcoT14I CCWWGG 4 cut(s) 319, 1337, 1400, 1590
EcoT22I ATGCAT 1 cut(s) 900
EcoT38I GRGCYC 3 cut(s) 975, 1273, 1630
EgeI GGCGCC 1 cut(s) 1343
EheI GGCGCC 1 cut(s) 1343
ErhI CCWWGG 4 cut(s) 319, 1337, 1400, 1590
Esp3I CGTCTC 1 cut(s) 1125
FalI AAGNNNNNCTT 6 cut(s) 1243, 1275, 1276, 1308, 1384, 1416
FaqI GGGAC 5 cut(s) 1006, 1067, 1207, 1240, 1333
FauNDI CATATG 1 cut(s) 844
FbaI TGATCA 1 cut(s) 241
Fnu4HI GCNGC 1 cut(s) 1617
FokI GGATG 5 cut(s) 17, 134, 344, 997, 1020
FriOI GRGCYC 3 cut(s) 975, 1273, 1630
Fsp4HI GCNGC 1 cut(s) 1617
FspBI CTAG 6 cut(s) 173, 741, 1101, 1389, 1512, 1631
GlaI GCGC 1 cut(s) 1343
GluI GCNGC 1 cut(s) 1617
GsuI CTGGAG 2 cut(s) 717, 816
HaeII RGCGCY 1 cut(s) 1345
HaeIII GGCC 1 cut(s) 1521
HapII CCGG 7 cut(s) 209, 462, 717, 1345, 1381, 1428, 1560
HgaI GACGC 1 cut(s) 1616
HhaI GCGC 1 cut(s) 1344
Hin1I GRCGYC 1 cut(s) 1342
Hin6I GCGC 1 cut(s) 1342
HinP1I GCGC 1 cut(s) 1342
HincII GTYRAC 1 cut(s) 36
HindII GTYRAC 1 cut(s) 36
HpaII CCGG 7 cut(s) 209, 462, 717, 1345, 1381, 1428, 1560
HphI GGTGA 8 cut(s) 335, 477, 671, 753, 870, 1065, 1086, 1398
Hpy166II GTNNAC 2 cut(s) 36, 294
Hpy8I GTNNAC 2 cut(s) 36, 294
HpyAV CCTTC 6 cut(s) 111, 284, 704, 761, 1320, 1386
HpyCH4III ACNGT 2 cut(s) 803, 986
HpyCH4IV ACGT 5 cut(s) 72, 93, 225, 1533, 1570
HpyCH4V TGCA 9 cut(s) 62, 179, 340, 898, 979, 992, 1010, 1157, 1463
HpyF10VI GCNNNNNNNGC 3 cut(s) 1123, 1616, 1625
HpyF3I CTNAG 6 cut(s) 288, 375, 517, 819, 1080, 1641
HpySE526I ACGT 5 cut(s) 72, 93, 225, 1533, 1570
Hsp92I GRCGYC 1 cut(s) 1342
HspAI GCGC 1 cut(s) 1342
KasI GGCGCC 1 cut(s) 1341
Kpn2I TCCGGA 2 cut(s) 208, 1559
Ksp22I TGATCA 1 cut(s) 241
LguI GCTCTTC 1 cut(s) 493
LmnI GCTCC 1 cut(s) 458
LweI GCATC 5 cut(s) 166, 1019, 1042, 1144, 1603
MabI ACCWGGT 1 cut(s) 1441
MaeI CTAG 6 cut(s) 173, 741, 1101, 1389, 1512, 1631
MaeII ACGT 5 cut(s) 72, 93, 225, 1533, 1570
MaeIII GTNAC 6 cut(s) 89, 483, 525, 736, 1065, 1404
MboII GAAGA 9 cut(s) 422, 510, 540, 597, 656, 720, 807, 867, 1616
MflI RGATCY 2 cut(s) 136, 1286
MhlI GDGCHC 4 cut(s) 231, 975, 1273, 1630
MluCI AATT 9 cut(s) 195, 349, 421, 540, 698, 726, 756, 1369, 1450
Mly113I GGCGCC 1 cut(s) 1342
MlyI GAGTC 5 cut(s) 280, 440, 644, 1022, 1073
MmeI TCCRAC 1 cut(s) 1634
Mph1103I ATGCAT 1 cut(s) 900
MroI TCCGGA 2 cut(s) 208, 1559
MroXI GAANNNNTTC 1 cut(s) 81
MseI TTAA 4 cut(s) 54, 357, 626, 1478
MslI CAYNNNNRTG 2 cut(s) 249, 1152
MspI CCGG 7 cut(s) 209, 462, 717, 1345, 1381, 1428, 1560
MspR9I CCNGG 3 cut(s) 455, 915, 1443
MvaI CCWGG 3 cut(s) 455, 915, 1443
MwoI GCNNNNNNNGC 3 cut(s) 1123, 1616, 1625
NarI GGCGCC 1 cut(s) 1342
NdeI CATATG 1 cut(s) 844
NlaIV GGNNCC 5 cut(s) 460, 1223, 1256, 1343, 1349
NmeAIII GCCGAG 2 cut(s) 1102, 1144
NmuCI GTSAC 3 cut(s) 483, 1065, 1404
NsiI ATGCAT 1 cut(s) 900
NspI RCATGY 1 cut(s) 898
PagI TCATGA 2 cut(s) 244, 556
PciSI GCTCTTC 1 cut(s) 493
PcsI WCGNNNNNNNCGW 1 cut(s) 78
PdmI GAANNNNTTC 1 cut(s) 81
PflFI GACNNNGTC 1 cut(s) 289
PkrI GCNGC 1 cut(s) 1618
PleI GAGTC 5 cut(s) 280, 439, 644, 1022, 1072
PluTI GGCGCC 1 cut(s) 1345
PmaCI CACGTG 2 cut(s) 226, 1571
PmlI CACGTG 2 cut(s) 226, 1571
PpsI GAGTC 5 cut(s) 280, 439, 644, 1022, 1072
Ppu21I YACGTR 3 cut(s) 94, 226, 1571
PpuMI RGGWCCY 2 cut(s) 1221, 1254
PshAI GACNNNNGTC 1 cut(s) 751
Psp1406I AACGTT 1 cut(s) 72
Psp5II RGGWCCY 2 cut(s) 1221, 1254
Psp6I CCWGG 3 cut(s) 453, 913, 1441
PspCI CACGTG 2 cut(s) 226, 1571
PspEI GGTNACC 2 cut(s) 483, 1404
PspGI CCWGG 3 cut(s) 453, 913, 1441
PspN4I GGNNCC 5 cut(s) 460, 1223, 1256, 1343, 1349
PspPI GGNCC 4 cut(s) 1221, 1254, 1347, 1557
PspPPI RGGWCCY 2 cut(s) 1221, 1254
PsuI RGATCY 2 cut(s) 136, 1286
PsyI GACNNNGTC 1 cut(s) 289
RsaI GTAC 2 cut(s) 493, 681
RsaNI GTAC 2 cut(s) 492, 680
RseI CAYNNNNRTG 2 cut(s) 249, 1152
SapI GCTCTTC 1 cut(s) 493
SaqAI TTAA 4 cut(s) 54, 357, 626, 1478
SatI GCNGC 1 cut(s) 1617
Sau96I GGNCC 4 cut(s) 1221, 1254, 1347, 1557
SchI GAGTC 5 cut(s) 280, 440, 644, 1022, 1073
ScrFI CCNGG 3 cut(s) 455, 915, 1443
SduI GDGCHC 4 cut(s) 231, 975, 1273, 1630
SexAI ACCWGGT 1 cut(s) 1441
SfaNI GCATC 5 cut(s) 166, 1019, 1042, 1144, 1603
SfcI CTRYAG 1 cut(s) 1482
SfoI GGCGCC 1 cut(s) 1343
SinI GGWCC 4 cut(s) 1221, 1254, 1347, 1557
SmiMI CAYNNNNRTG 2 cut(s) 249, 1152
Sse9I AATT 9 cut(s) 195, 349, 421, 540, 698, 726, 756, 1369, 1450
SsiI CCGC 1 cut(s) 1616
SspDI GGCGCC 1 cut(s) 1341
SspMI CTAG 6 cut(s) 173, 741, 1101, 1389, 1512, 1631
StyD4I CCNGG 3 cut(s) 453, 913, 1441
StyI CCWWGG 4 cut(s) 319, 1337, 1400, 1590
TaaI ACNGT 2 cut(s) 803, 986
TaiI ACGT 5 cut(s) 75, 96, 228, 1536, 1573
TaqI TCGA 3 cut(s) 390, 1213, 1316
TasI AATT 9 cut(s) 195, 349, 421, 540, 698, 726, 756, 1369, 1450
TauI GCSGC 1 cut(s) 1619
Tru1I TTAA 4 cut(s) 54, 357, 626, 1478
Tru9I TTAA 4 cut(s) 54, 357, 626, 1478
TscAI CASTG 2 cut(s) 626, 999
TseFI GTSAC 3 cut(s) 483, 1065, 1404
Tsp45I GTSAC 3 cut(s) 483, 1065, 1404
TspDTI ATGAA 6 cut(s) 74, 411, 545, 573, 861, 1617
TspRI CASTG 2 cut(s) 626, 999
Tth111I GACNNNGTC 1 cut(s) 289
VpaK11BI GGWCC 4 cut(s) 1221, 1254, 1347, 1557
XapI RAATTY 2 cut(s) 195, 1450
XbaI TCTAGA 1 cut(s) 1630
XceI RCATGY 1 cut(s) 898
XmnI GAANNNNTTC 1 cut(s) 81
XspI CTAG 6 cut(s) 173, 741, 1101, 1389, 1512, 1631
Zsp2I ATGCAT 1 cut(s) 900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.