Rh5BG364500

DEK C terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0010234
Physical Location & Seq
Reverse (-)
57152698 .. 57168792
16095 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG364500.1

Sequence Viewer

Length: 2403 bp
ATGATGGTGGCGCTGCGCCTGGAGAAGTTTCAAATCTGCGAAATTGTAAACGAAGATCTTCTGGACCAGAATGACAACAATGCGGTAGCGACGGAGCTTGACTGCTTTGACCTCGGAGCGGAAGGAGAGCTCACCGATGCAGCGGGACTGGTGATCGTCCCAGATCATGACCTTGTTGGGGGAGTAGAGGGGGTCGGGCTGTCGCCGACGATGAGAAGCAGTGAGTGTGGGACTCGAAGACTTTTCTCTCTGAGAAGCTCCAAATCAAGCACCAATTATTCCAATCTCTGCGATATATTTCTGAGCAAGTTTGCGGAAAAAGGGATCTCTTTGAGATTAATTAAGATCAGTTCCATCATGGGTGATGAAGACACGGTGGCTAATGGCACCGAAACAGTAGCAAACGGTATTAGCAAGCCGCAGGAAACCAGTGAAGCTGTGAGTGAGAAGAAATGTGAGGAGAAGGTGGGTATCAAAGAAATGGATGAAGATAAGAAAAGTGATGAGAAAGATGGAGTTGAGAAAATGGATGAAGATCTAGAGGTCAATGGAAGCAAAGATGAAAAAGTGAAAGAAGAAAAAGAGGAACCCAAAGTTGAGGAGATTGAAGACAAAACTGGGGATCAAGATAAGAAAGGTGTTGAGAAAGCTGAAGTTGGAAAAATGGATGAAGACAGACAGGCAAATGGAAGTAATGGTGAAAAAGTGGAAGAAGAAACTGATCCAAATGAAAAAGAGAAGACCAACGAAAACTCTGAAGAAAAGAAGGAAATTGAAGTAGAAGAAAAGAAAATTGACGAGACTAATGAAGTGGAAGAGAAGGCAGAAGAAAAGGAAGAAGAGAAGGCAGAAGAGAAGGAAGAAGAGACGGAAGGAGAGAAGGCAGAAGAGAAGGCAGAAGAGATGGAAGAAGAGAAGGACGAGGAGATGGAAGAAGATAAGGAAGAAGAGAAGAAGGATGAGGAGAAGAAAGAAGAGAGAGAAAAAGAGGCTAAGGGGGCTAAAGGATCGAAAAAGCGTGGACAACAGAGTGGAGAGAAAACTAAAAGTAAGGAGAAGAAAAAAAAAGTGTTAAAAAAGGAGCCGGAGCCAAGGACTCCTGCTATTGATCGTCCTGTACGTGAGCGGAAATCAGTTGAAAGGCTGGTGGCATCTATAGAAAAAGATACTACCAGGGACTTCCAAATAGAGAAGGGAAGTGGTACAGCACTGAAAGACATACCCAATGTGGCCTTCAAGTTATCAAGGAAGAAAATGGATGATACCCTCAAACTACTTCATACAATTCTTTTTGGGGGAAGGAGAGGAAAGGCAGTTCAGGTCAAGAGTAACATATCCAGGTTTTCTGGTTTTGTGTGGCATGGAAATGAGGACAAGCAAAAGAGTAAAGTAAAAGAAAAAATGGACAAGTGTAATAAAGAGAAGTTACTGGAATTTTGTGATCTGTTTGACTTACCAACCGCCAAAGCTACTTCTAAGAAGGAGGATATAGTTGCGAAGCTGATAGACTTTTTGGTTGCACCTCATGCGACCACTACTGTGGTACTTGGAGAAAAAGAGCAGTCGAGTAAGGGCCAAAAGCGCAAGAGGGCAGCTAAAGGCAGTTCATCAACATCTGGGGGCTCAAAGCGGTCAGGAAAGAGTCGTAGGAAGAATGATGATGATTCAAAATTGGAGGATAAGAGTACACCAGATACAGAAGACGAGTCGGAGGAAGAGGAGAAAGAAGAAGACGATGAAAAGGTAGAGGAGGAAATGGAAGATGTAGCTCAAGAAAAGTCTGAGGATGAGATGCCTGAGCATTCAGATAGTGAAGAGAAACATGATCCTTCAGATGATTCTGAAGAAGAAGTGGAAAAAAAGAAGCCACGTTCAAAATCATCATCCAGAAAGAAGGAATCTGCTGGAAAAGCTAAAACTAAAAAAGCTACAGTTTCTCCTAAATCTACTCCACCAGCTAATAAACCAAAGAAGTCAACACCAAAACGCACTCCAGTTGATGATGACAGTGACACGAGTCCAAAGCCATCCTCAAGGAAGAAGAGAACTGAGCGAGTGTCAAAAGCCTCAACTCCAACAAAATCTGCCTTGAAAGAAAAAACTGGGAAAAAAGTTGCTAAAGGGAAGGACAAGACCAAGGAGGAAAAATTGAGGCCAAGTGATGATGAGTTGAGAGATGCAATATGTGAGATTCTCAAAGAAGTTGACTTCAATACGGCTACTTTCACCGACATTCTGAAGCATCTTGCTCGGCAATTTGATACTGATCTCAGCGTGAGAAAGTCATCTATAAAGGTAATGATCCAGGAAGAGCTTACCAAATTAGCTGATGAGGCGGACGAGGAAGATGGAGATGATGCCGAGAAAGATGAACCCCAGTCTGCTGGGGAGGTGGAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DEK_C

Protein Analysis

800

Amino Acids

89.81

Weight (kDa)

4.95

Isoelectric Point (pI)

51.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEK_C PF08766 719 - 772 9.1e-14 DEK C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010234)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G26630 AT4G26630 AT5G55660
fragaria_vesca FvH4_3g29362
malus_domestica MD03G1183500.v1.1 MD11G1200600.v1.1
prunus_persica Prupe.4G242600_v2.0.a1
pyrus_communis pycom03g13710 pycom11g17300
rosa_chinensis RchiOBHm_Chr5g0053741
rosa_laevigata RLG00000034900
rosa_multiflora Rmu_sc0001759.1_g000043
rosa_roxburghii Rroxscaffold_1G00026850
rosa_rugosa Rorug05G0281900 Rorug05G0282000 Rorug05G0282100
rosa_samantha Rh5AG352800 Rh5BG364500 Rh5CG389400 Rh5DG379300
rosa_wichuraiana Rw5G033330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 386
AccBSI CCGCTC 2 cut(s) 119, 1126
AciI CCGC 9 cut(s) 83, 119, 143, 314, 419, 1126, 1461, 1630, 2336
AclWI GGATC 6 cut(s) 332, 630, 716, 1015, 1820, 2296
AcsI RAATTY 1 cut(s) 1433
AcuI CTGAAG 5 cut(s) 672, 777, 1815, 1863, 2258
AfaI GTAC 4 cut(s) 1119, 1204, 1545, 1687
AfiI CCNNNNNNNGG 2 cut(s) 118, 178
AgsI TTSAA 9 cut(s) 32, 608, 776, 1139, 1237, 1668, 1875, 2092, 2212
AjnI CCWGG 4 cut(s) 18, 1172, 1337, 2304
AjuI GAANNNNNNNTTGG 2 cut(s) 1217, 1249
AleI CACNNNNGTG 1 cut(s) 1538
AloI GAACNNNNNNTCC 2 cut(s) 1299, 1331
Alw21I GWGCWC 1 cut(s) 132
Alw26I GTCTC 2 cut(s) 794, 860
AlwI GGATC 6 cut(s) 332, 630, 716, 1015, 1820, 2296
AoxI GGCC 3 cut(s) 1230, 1573, 2153
ApeKI GCWGC 3 cut(s) 13, 140, 1592
ApoI RAATTY 1 cut(s) 1433
AseI ATTAAT 1 cut(s) 338
Asp700I GAANNNNTTC 1 cut(s) 57
AspLEI GCGC 3 cut(s) 13, 18, 1584
AspS9I GGNCC 2 cut(s) 64, 1573
AsuHPI GGTGA 5 cut(s) 124, 163, 374, 710, 2218
AvaII GGWCC 1 cut(s) 64
BanI GGYRCC 1 cut(s) 386
BanII GRGCYC 2 cut(s) 132, 1625
BauI CACGAG 1 cut(s) 2014
BbsI GAAGAC 7 cut(s) 244, 375, 615, 678, 746, 1707, 1737
Bbv12I GWGCWC 1 cut(s) 132
BbvI GCAGC 2 cut(s) 152, 1604
BccI CCATC 6 cut(s) 362, 506, 898, 922, 2035, 2342
BceAI ACGGC 1 cut(s) 2232
BcgI CGANNNNNNTGC 2 cut(s) 2231, 2265
BciT130I CCWGG 4 cut(s) 20, 1174, 1339, 2306
BcoDI GTCTC 2 cut(s) 794, 860
BfaI CTAG 1 cut(s) 539
BfmI CTRYAG 2 cut(s) 1155, 1929
BfoI RGCGCY 1 cut(s) 14
BglII AGATCT 2 cut(s) 55, 535
BisI GCNGC 4 cut(s) 14, 141, 419, 1593
BlsI GCNGC 4 cut(s) 15, 142, 420, 1594
Bme1390I CCNGG 4 cut(s) 20, 1174, 1339, 2306
Bme18I GGWCC 1 cut(s) 64
BmgT120I GGNCC 2 cut(s) 64, 1573
BmiI GGNNCC 4 cut(s) 388, 588, 1083, 1089
BmrFI CCNGG 4 cut(s) 20, 1174, 1339, 2306
BmrI ACTGGG 3 cut(s) 627, 2112, 2371
BmsI GCATC 6 cut(s) 127, 1160, 1782, 2167, 2251, 2347
BmuI ACTGGG 3 cut(s) 627, 2112, 2371
BoxI GACNNNNGTC 1 cut(s) 2016
BpiI GAAGAC 7 cut(s) 244, 375, 615, 678, 746, 1707, 1737
BpmI CTGGAG 2 cut(s) 41, 1977
Bpu10I CCTNAGC 2 cut(s) 993, 1797
BpuEI CTTGAG 2 cut(s) 1755, 2017
BsaAI YACGTR 1 cut(s) 1121
BsaBI GATNNNNATC 2 cut(s) 534, 2265
BsaJI CCNNGG 4 cut(s) 112, 1091, 1173, 2136
BsaXI ACNNNNNCTCC 2 cut(s) 1921, 1951
Bsc4I CCNNNNNNNGG 2 cut(s) 118, 178
Bse1I ACTGG 7 cut(s) 153, 429, 622, 1434, 1994, 2107, 2377
Bse8I GATNNNNATC 2 cut(s) 534, 2265
BseBI CCWGG 4 cut(s) 20, 1174, 1339, 2306
BseDI CCNNGG 4 cut(s) 112, 1091, 1173, 2136
BseGI GGATG 8 cut(s) 490, 535, 673, 964, 1264, 1792, 1883, 2027
BseJI GATNNNNATC 2 cut(s) 534, 2265
BseLI CCNNNNNNNGG 2 cut(s) 118, 178
BseMII CTCAG 6 cut(s) 242, 293, 1773, 1788, 2040, 2284
BseNI ACTGG 7 cut(s) 153, 429, 622, 1434, 1994, 2107, 2377
BseRI GAGGAG 6 cut(s) 473, 614, 938, 977, 1733, 1763
BseXI GCAGC 2 cut(s) 152, 1604
BseYI CCCAGC 1 cut(s) 2384
BshFI GGCC 3 cut(s) 1232, 1575, 2155
BshNI GGYRCC 1 cut(s) 386
BsiHKAI GWGCWC 1 cut(s) 132
BsiSI CCGG 1 cut(s) 1085
BslFI GGGAC 4 cut(s) 143, 159, 244, 1190
BslI CCNNNNNNNGG 2 cut(s) 118, 178
BsmAI GTCTC 2 cut(s) 794, 860
BsmBI CGTCTC 1 cut(s) 860
BsmFI GGGAC 4 cut(s) 143, 159, 244, 1190
BsmI GAATGC 1 cut(s) 1801
BsnI GGCC 3 cut(s) 1232, 1575, 2155
Bsp1286I GDGCHC 2 cut(s) 132, 1625
BspACI CCGC 9 cut(s) 83, 119, 143, 314, 419, 1126, 1461, 1630, 2336
BspANI GGCC 3 cut(s) 1232, 1575, 2155
BspCNI CTCAG 6 cut(s) 243, 294, 1774, 1789, 2041, 2283
BspHI TCATGA 1 cut(s) 166
BspLI GGNNCC 4 cut(s) 388, 588, 1083, 1089
BspPI GGATC 6 cut(s) 332, 630, 716, 1015, 1820, 2296
BspQI GCTCTTC 1 cut(s) 2304
BspT107I GGYRCC 1 cut(s) 386
BsrBI CCGCTC 2 cut(s) 119, 1126
BsrI ACTGG 7 cut(s) 153, 429, 622, 1434, 1994, 2107, 2377
BssECI CCNNGG 4 cut(s) 112, 1091, 1173, 2136
BssSI CACGAG 1 cut(s) 2014
BssT1I CCWWGG 2 cut(s) 1091, 2136
Bst2BI CACGAG 1 cut(s) 2014
Bst2UI CCWGG 4 cut(s) 20, 1174, 1339, 2306
Bst4CI ACNGT 6 cut(s) 376, 397, 407, 1540, 1933, 2009
BstAPI GCANNNNNTGC 1 cut(s) 1526
BstBAI YACGTR 1 cut(s) 1121
BstC8I GCNNGC 1 cut(s) 416
BstDEI CTNAG 8 cut(s) 251, 302, 993, 1476, 1782, 1797, 2049, 2270
BstF5I GGATG 8 cut(s) 490, 535, 673, 964, 1264, 1792, 1883, 2027
BstH2I RGCGCY 1 cut(s) 14
BstHHI GCGC 3 cut(s) 13, 18, 1584
BstMAI GTCTC 2 cut(s) 794, 860
BstMWI GCNNNNNNNGC 5 cut(s) 998, 1526, 1581, 1910, 2333
BstNI CCWGG 4 cut(s) 20, 1174, 1339, 2306
BstPAI GACNNNNGTC 1 cut(s) 2016
BstSCI CCNGG 4 cut(s) 18, 1172, 1337, 2304
BstSFI CTRYAG 2 cut(s) 1155, 1929
BstV1I GCAGC 2 cut(s) 152, 1604
BstV2I GAAGAC 7 cut(s) 244, 375, 615, 678, 746, 1707, 1737
BstX2I RGATCY 3 cut(s) 55, 324, 535
BstXI CCANNNNNNTGG 2 cut(s) 1540, 2384
BstYI RGATCY 3 cut(s) 55, 324, 535
BsuRI GGCC 3 cut(s) 1232, 1575, 2155
BtsCI GGATG 8 cut(s) 490, 535, 673, 964, 1264, 1792, 1883, 2027
BtsI GCAGTG 1 cut(s) 226
BtsIMutI CAGTG 4 cut(s) 226, 436, 1208, 2014
Cac8I GCNNGC 1 cut(s) 416
CciI TCATGA 1 cut(s) 166
CfoI GCGC 3 cut(s) 13, 18, 1584
Cfr13I GGNCC 2 cut(s) 64, 1573
Csp6I GTAC 4 cut(s) 1118, 1203, 1544, 1686
CviAII CATG 5 cut(s) 167, 358, 1361, 1526, 1823
CviQI GTAC 4 cut(s) 1118, 1203, 1544, 1686
DdeI CTNAG 8 cut(s) 251, 302, 993, 1476, 1782, 1797, 2049, 2270
EciI GGCGGA 1 cut(s) 2351
Ecl136II GAGCTC 1 cut(s) 130
Eco130I CCWWGG 2 cut(s) 1091, 2136
Eco24I GRGCYC 2 cut(s) 132, 1625
Eco47I GGWCC 1 cut(s) 64
Eco53kI GAGCTC 1 cut(s) 130
Eco57I CTGAAG 5 cut(s) 672, 777, 1815, 1863, 2258
EcoICRI GAGCTC 1 cut(s) 130
EcoRII CCWGG 4 cut(s) 18, 1172, 1337, 2304
EcoT14I CCWWGG 2 cut(s) 1091, 2136
EcoT38I GRGCYC 2 cut(s) 132, 1625
ErhI CCWWGG 2 cut(s) 1091, 2136
Esp3I CGTCTC 1 cut(s) 860
FaeI CATG 5 cut(s) 170, 361, 1364, 1529, 1826
FaqI GGGAC 4 cut(s) 143, 159, 244, 1190
FatI CATG 5 cut(s) 166, 357, 1360, 1525, 1822
FauI CCCGC 1 cut(s) 136
Fnu4HI GCNGC 4 cut(s) 14, 141, 419, 1593
FokI GGATG 8 cut(s) 497, 542, 680, 971, 1271, 1799, 1870, 2014
FriOI GRGCYC 2 cut(s) 132, 1625
Fsp4HI GCNGC 4 cut(s) 14, 141, 419, 1593
FspBI CTAG 1 cut(s) 539
GlaI GCGC 3 cut(s) 12, 17, 1583
GluI GCNGC 4 cut(s) 14, 141, 419, 1593
GsaI CCCAGC 1 cut(s) 2388
GsuI CTGGAG 2 cut(s) 41, 1977
HaeII RGCGCY 1 cut(s) 14
HaeIII GGCC 3 cut(s) 1232, 1575, 2155
HapII CCGG 1 cut(s) 1085
HhaI GCGC 3 cut(s) 13, 18, 1584
Hin1II CATG 5 cut(s) 170, 361, 1364, 1529, 1826
Hin6I GCGC 3 cut(s) 11, 16, 1582
HinP1I GCGC 3 cut(s) 11, 16, 1582
HincII GTYRAC 2 cut(s) 1977, 2206
HindII GTYRAC 2 cut(s) 1977, 2206
HinfI GANTC 9 cut(s) 232, 1096, 1642, 1664, 1706, 1838, 1898, 2017, 2191
HpaII CCGG 1 cut(s) 1085
HphI GGTGA 5 cut(s) 124, 163, 374, 710, 2218
Hpy166II GTNNAC 5 cut(s) 49, 1022, 1688, 1977, 2206
Hpy188III TCNNGA 8 cut(s) 62, 167, 539, 626, 1324, 1635, 1772, 1887
Hpy8I GTNNAC 5 cut(s) 49, 1022, 1688, 1977, 2206
Hpy99I CGWCG 2 cut(s) 94, 211
HpyCH4III ACNGT 6 cut(s) 376, 397, 407, 1540, 1933, 2009
HpyCH4IV ACGT 2 cut(s) 1120, 1870
HpyCH4V TGCA 3 cut(s) 140, 1520, 2180
HpyF10VI GCNNNNNNNGC 5 cut(s) 998, 1526, 1581, 1910, 2333
HpyF3I CTNAG 8 cut(s) 251, 302, 993, 1476, 1782, 1797, 2049, 2270
HpySE526I ACGT 2 cut(s) 1120, 1870
Hsp92II CATG 5 cut(s) 170, 361, 1364, 1529, 1826
HspAI GCGC 3 cut(s) 11, 16, 1582
LguI GCTCTTC 1 cut(s) 2304
LmnI GCTCC 5 cut(s) 94, 116, 263, 1081, 1087
Lsp1109I GCAGC 2 cut(s) 152, 1604
LweI GCATC 6 cut(s) 127, 1160, 1782, 2167, 2251, 2347
MaeI CTAG 1 cut(s) 539
MaeII ACGT 2 cut(s) 1120, 1870
MaeIII GTNAC 3 cut(s) 1328, 1425, 2009
MbiI CCGCTC 2 cut(s) 119, 1126
MflI RGATCY 3 cut(s) 55, 324, 535
MhlI GDGCHC 2 cut(s) 132, 1625
MlyI GAGTC 5 cut(s) 226, 1090, 1651, 1715, 2026
MmeI TCCRAC 3 cut(s) 637, 1689, 2099
MroXI GAANNNNTTC 1 cut(s) 57
MseI TTAA 3 cut(s) 338, 342, 1073
MslI CAYNNNNRTG 2 cut(s) 1365, 1538
MspA1I CMGCKG 1 cut(s) 143
MspI CCGG 1 cut(s) 1085
MspR9I CCNGG 4 cut(s) 20, 1174, 1339, 2306
MteI GCGCNGCGC 1 cut(s) 14
Mva1269I GAATGC 1 cut(s) 1801
MvaI CCWGG 4 cut(s) 20, 1174, 1339, 2306
MwoI GCNNNNNNNGC 5 cut(s) 998, 1526, 1581, 1910, 2333
NlaIII CATG 5 cut(s) 170, 361, 1364, 1529, 1826
NlaIV GGNNCC 4 cut(s) 388, 588, 1083, 1089
NmeAIII GCCGAG 2 cut(s) 2230, 2386
NmuCI GTSAC 1 cut(s) 2009
OliI CACNNNNGTG 1 cut(s) 1538
PacI TTAATTAA 1 cut(s) 342
PagI TCATGA 1 cut(s) 166
PciSI GCTCTTC 1 cut(s) 2304
PcsI WCGNNNNNNNCGW 1 cut(s) 1117
PctI GAATGC 1 cut(s) 1801
PdmI GAANNNNTTC 1 cut(s) 57
PfeI GAWTC 4 cut(s) 1664, 1838, 1898, 2191
PfoI TCCNGGA 1 cut(s) 2304
PkrI GCNGC 4 cut(s) 15, 142, 420, 1594
PleI GAGTC 5 cut(s) 226, 1090, 1650, 1714, 2025
PpsI GAGTC 5 cut(s) 226, 1090, 1650, 1714, 2025
Ppu21I YACGTR 1 cut(s) 1121
PshAI GACNNNNGTC 1 cut(s) 2016
PshBI ATTAAT 1 cut(s) 338
Psp124BI GAGCTC 1 cut(s) 132
Psp6I CCWGG 4 cut(s) 18, 1172, 1337, 2304
PspFI CCCAGC 1 cut(s) 2384
PspGI CCWGG 4 cut(s) 18, 1172, 1337, 2304
PspN4I GGNNCC 4 cut(s) 388, 588, 1083, 1089
PspPI GGNCC 2 cut(s) 64, 1573
PsuI RGATCY 3 cut(s) 55, 324, 535
RsaI GTAC 4 cut(s) 1119, 1204, 1545, 1687
RsaNI GTAC 4 cut(s) 1118, 1203, 1544, 1686
RseI CAYNNNNRTG 2 cut(s) 1365, 1538
SacI GAGCTC 1 cut(s) 132
SapI GCTCTTC 1 cut(s) 2304
SaqAI TTAA 3 cut(s) 338, 342, 1073
SatI GCNGC 4 cut(s) 14, 141, 419, 1593
Sau96I GGNCC 2 cut(s) 64, 1573
SchI GAGTC 5 cut(s) 226, 1090, 1651, 1715, 2026
ScrFI CCNGG 4 cut(s) 20, 1174, 1339, 2306
SduI GDGCHC 2 cut(s) 132, 1625
SfaNI GCATC 6 cut(s) 127, 1160, 1782, 2167, 2251, 2347
SfcI CTRYAG 2 cut(s) 1155, 1929
SinI GGWCC 1 cut(s) 64
SmiMI CAYNNNNRTG 2 cut(s) 1365, 1538
SmlI CTYRAG 2 cut(s) 1770, 2032
SmoI CTYRAG 2 cut(s) 1770, 2032
SsiI CCGC 9 cut(s) 83, 119, 143, 314, 419, 1126, 1461, 1630, 2336
SspMI CTAG 1 cut(s) 539
SstI GAGCTC 1 cut(s) 132
StyD4I CCNGG 4 cut(s) 18, 1172, 1337, 2304
StyI CCWWGG 2 cut(s) 1091, 2136
TaaI ACNGT 6 cut(s) 376, 397, 407, 1540, 1933, 2009
TaiI ACGT 2 cut(s) 1123, 1873
TaqI TCGA 3 cut(s) 235, 1010, 1565
TatI WGTACW 1 cut(s) 1685
TauI GCSGC 1 cut(s) 421
TfiI GAWTC 4 cut(s) 1664, 1838, 1898, 2191
Tru1I TTAA 3 cut(s) 338, 342, 1073
Tru9I TTAA 3 cut(s) 338, 342, 1073
TscAI CASTG 4 cut(s) 226, 436, 1215, 2014
TseFI GTSAC 1 cut(s) 2009
TseI GCWGC 3 cut(s) 13, 140, 1592
Tsp45I GTSAC 1 cut(s) 2009
TspGWI ACGGA 2 cut(s) 107, 884
TspRI CASTG 4 cut(s) 226, 436, 1215, 2014
VpaK11BI GGWCC 1 cut(s) 64
VspI ATTAAT 1 cut(s) 338
XapI RAATTY 1 cut(s) 1433
XbaI TCTAGA 1 cut(s) 538
XmnI GAANNNNTTC 1 cut(s) 57
XspI CTAG 1 cut(s) 539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.