Rh5DG379300

DEK C terminal domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
57704259 .. 57719989
15731 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG379300.1

Sequence Viewer

Length: 2298 bp
ATGTTGGCGCTAGTGTGCCAGCGCTGGGAGCTAGGCCTGGTGCTATCGGCCGCTGGGTTTGACATAGCGAGGTTGAAGATTGGTGCTGATGAGCTTCTGCCTGGCTGTAACGCTTACCGTTGGCTGAGTGAGTGTGGGACTCGAAGACTTTTCTCTCTGAGAAGCTCCAAATCAAGCACCAATTATTCCAATCTCTGTGATATATTTCTGAGCAAGTTTGCAGAAAAAGGGATCTCTTTGAGATTAATTAAGATCAGTTCCATCATGGGTGATGAAGACACGGTGGCTAATGGCACCGAAACAGTAGCAAACGGTATTAGCAAGCCGCAGGAAACCAGTGAAGCTGTGAGTGAGAAGAAATGTGAGGAGAAGGTGGGTATCAAAGAAATGGATGAAGATAAGAAAATTGATGAGAAAGATGGAGTTGAGAAAATGGATGAAGATCTAGAGGTCAATGGAAGCAAAGATGAAAAAGTGAAAGAAGAAAAAGAGGAACCCAAAGTTGAAGAGATTGAAGACAAAACTGGGGATCAAGATAAGAAAGGTGTTGAAAAAGCTGAAGTTGGAAAAATGGATGAAGACAAACAGGCAAATGCAAGTAATGGTGAAAAAGTGGAAGAAGAAACTGATCCAAATGAAAAAGAGATGACCAAAGGAAACTCTGAAGAAAAGAAGGAAATTGAAGTGGAAGAAAAGAAAATAGACGAGACTAATGAAGCGGAAGAGAAGGCAGAAGAGAAGGAAGAAGAGAAGGCAGAAGAGAAGGAAGAAGAGAAGACAGAAGAGATGGAAGAAGAGAAGGACGAGGAGATGGAAGAAGATAAGGAAGAAGAGAAGAAGGATGAGGAGAAGAAAGAAGAGAGAGAAAAAGAGGCTAAGGGGGCTAAAGGATCGAAAAAGCGTGGACAACAGAGTGGAGAGAAAACTAAAAGTAATGAGAAGAAAAAAAAAGTGTTAAAAAAGGAGCCGGAGCCAAGGACTCCTGCTATTGATCGTCCTGTACGTGAGCGGAAATCAGTTGAAAGGCTGGTGGCATCTATAGAAAAAGATACTACCAGGGACTTCCAAATAGAGAAGGGAAGTGGTACAGCACTGAAAGACATACCCAATGTGGCCTTTAAGTTATCAAGGAAGAAAATGGATGATACCCTCAAACTACTTCATACAATTCTTTTTGGGGGAAGGAGAGGAAAGGCAGTTCAGGTCAAGAGTAACATATCTAGGTTTTCTGGTTTTGTGTGGCATGGAAATGAGGACAAGCAAAAGAGTAAAGTAAAAGAAAAAATGGACAAGTGTAATAAAGAGAAGTTACTGGAATTTTGTGATCTGTTTGACTTACCAACCGCCAAAGCTACTTCTAAGAAGGAGGATATAGTTGCGAAGCTGATAGACTTTTTGGTTGCACCTCATGCGACCACTACTGTGGTACTTGGAGAAAAAGAGCAGTCGAGTAAGGGCCAAAAGCGCAAGAGGGCAGCTAAAGGCAGTTCATCAACATCTGGGGGCTCAAAGCGGTCAGGAAAGAGTCGTAGGAAGAATGATGATGATTCTAAATTGGAGGATAAGAGTACACCAGATACAGAAGACGAGTCGGAGGAAGAGGAGAAAGAAGAAGACGATGAAAAGGTAGAGGAGGAAATGGAAGATGTAGCTCAAGAAAAGTCTGAGGATGAGATGCCTGAGCATTCAGATAGTGAAGAGAAGCATGATCCTTCAGATGATTCTGAAGAAGAAGTGGAAAAAAAGAAGCCACGTTCAAAATCATCATCCAGAAAGAAGGAATCTGCTGGAAAAGCTAAAACTAAAAAAGCTACAGTTTCTCCAAAATCTACTCCTAAATCTACTCCACCAGCTAATAAACCAAAGAAGTCAACACCAAAACGCACTCCAGTTGATGATGACAGTGACACGAGTCCAAAGCCATCCTCAAGGAAGAAGAGAACTGAGCGAGTGTCAAAAGCCTCAACTCCAACAAAATCTGCCTTGAAAGAAAAAACTGGGAAAAAAGTTGCTAAAGGGAAGGACAAGACCAAGGAGGAAAAATTGAGGCCAAGTGATGATGAGTTGAGAGATGCAATATGTGAGATTCTTAAAGAAGTTGACTTCAATACGGCTACTTTCACCGACATTTTGAAGCATCTTGCTCGGCAATTTGATACTGATCTCAGCGTGAGAAAGTCATCTATAAAGGTAATGATCCAGGAAGAGCTTACCAAATTAGCTGATGAGGCGGACGAGGAAGATGGAGATGATGCAGAGAAAGATGAACCCCAGTCTGCTGGGGAGGTGGAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

765

Amino Acids

86.15

Weight (kDa)

5.14

Isoelectric Point (pI)

52.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEK_C PF08766 684 - 737 8.6e-14 DEK C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010234)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 293
AccBSI CCGCTC 1 cut(s) 1009
AciI CCGC 7 cut(s) 51, 326, 719, 1009, 1344, 1513, 2231
AclWI GGATC 6 cut(s) 239, 537, 623, 898, 1703, 2191
AcoI YGGCCR 1 cut(s) 48
AcsI RAATTY 1 cut(s) 1316
AcuI CTGAAG 4 cut(s) 579, 684, 1698, 1746
AfaI GTAC 4 cut(s) 1002, 1087, 1428, 1570
AfeI AGCGCT 1 cut(s) 23
AfiI CCNNNNNNNGG 1 cut(s) 25
AjnI CCWGG 4 cut(s) 36, 100, 1055, 2199
AleI CACNNNNGTG 1 cut(s) 1421
AloI GAACNNNNNNTCC 2 cut(s) 1182, 1214
Alw26I GTCTC 1 cut(s) 701
AlwI GGATC 6 cut(s) 239, 537, 623, 898, 1703, 2191
Aor51HI AGCGCT 1 cut(s) 23
AoxI GGCC 5 cut(s) 34, 48, 1113, 1456, 2048
ApeKI GCWGC 1 cut(s) 1475
ApoI RAATTY 1 cut(s) 1316
AseI ATTAAT 1 cut(s) 245
AspLEI GCGC 3 cut(s) 10, 24, 1467
AspS9I GGNCC 1 cut(s) 1456
AsuHPI GGTGA 3 cut(s) 281, 617, 2113
BanI GGYRCC 1 cut(s) 293
BanII GRGCYC 1 cut(s) 1508
BauI CACGAG 1 cut(s) 1909
BbsI GAAGAC 7 cut(s) 151, 282, 522, 585, 782, 1590, 1620
BbvI GCAGC 1 cut(s) 1487
BccI CCATC 6 cut(s) 269, 413, 781, 805, 1930, 2237
BceAI ACGGC 1 cut(s) 2127
BcgI CGANNNNNNTGC 2 cut(s) 2126, 2160
BciT130I CCWGG 4 cut(s) 38, 102, 1057, 2201
BcoDI GTCTC 1 cut(s) 701
BfaI CTAG 4 cut(s) 11, 32, 446, 1221
BfmI CTRYAG 2 cut(s) 1038, 1812
BfoI RGCGCY 2 cut(s) 11, 25
BglII AGATCT 1 cut(s) 442
BisI GCNGC 3 cut(s) 51, 326, 1476
BlsI GCNGC 3 cut(s) 52, 327, 1477
Bme1390I CCNGG 4 cut(s) 38, 102, 1057, 2201
BmgT120I GGNCC 1 cut(s) 1456
BmiI GGNNCC 4 cut(s) 295, 495, 966, 972
BmrFI CCNGG 4 cut(s) 38, 102, 1057, 2201
BmrI ACTGGG 3 cut(s) 534, 2007, 2266
BmsI GCATC 5 cut(s) 1043, 1665, 2062, 2146, 2242
BmuI ACTGGG 3 cut(s) 534, 2007, 2266
BoxI GACNNNNGTC 1 cut(s) 1911
BpiI GAAGAC 7 cut(s) 151, 282, 522, 585, 782, 1590, 1620
BpmI CTGGAG 1 cut(s) 1872
Bpu10I CCTNAGC 2 cut(s) 876, 1680
BpuEI CTTGAG 2 cut(s) 1638, 1912
BsaAI YACGTR 1 cut(s) 1004
BsaBI GATNNNNATC 2 cut(s) 441, 2160
BsaJI CCNNGG 3 cut(s) 974, 1056, 2031
BsaXI ACNNNNNCTCC 2 cut(s) 1804, 1834
Bsc4I CCNNNNNNNGG 1 cut(s) 25
Bse1I ACTGG 6 cut(s) 336, 529, 1317, 1889, 2002, 2272
Bse8I GATNNNNATC 2 cut(s) 441, 2160
BseBI CCWGG 4 cut(s) 38, 102, 1057, 2201
BseDI CCNNGG 3 cut(s) 974, 1056, 2031
BseGI GGATG 8 cut(s) 397, 442, 580, 847, 1147, 1675, 1766, 1922
BseJI GATNNNNATC 2 cut(s) 441, 2160
BseLI CCNNNNNNNGG 1 cut(s) 25
BseMII CTCAG 7 cut(s) 116, 149, 200, 1656, 1671, 1935, 2179
BseNI ACTGG 6 cut(s) 336, 529, 1317, 1889, 2002, 2272
BseRI GAGGAG 5 cut(s) 380, 821, 860, 1616, 1646
BseX3I CGGCCG 1 cut(s) 48
BseXI GCAGC 1 cut(s) 1487
BseYI CCCAGC 3 cut(s) 24, 53, 2279
Bsh1285I CGRYCG 1 cut(s) 51
BshFI GGCC 5 cut(s) 36, 50, 1115, 1458, 2050
BshNI GGYRCC 1 cut(s) 293
BsiEI CGRYCG 1 cut(s) 51
BsiSI CCGG 1 cut(s) 968
BslFI GGGAC 2 cut(s) 151, 1073
BslI CCNNNNNNNGG 1 cut(s) 25
BsmAI GTCTC 1 cut(s) 701
BsmFI GGGAC 2 cut(s) 151, 1073
BsmI GAATGC 1 cut(s) 1684
BsnI GGCC 5 cut(s) 36, 50, 1115, 1458, 2050
Bsp1286I GDGCHC 1 cut(s) 1508
BspACI CCGC 7 cut(s) 51, 326, 719, 1009, 1344, 1513, 2231
BspANI GGCC 5 cut(s) 36, 50, 1115, 1458, 2050
BspCNI CTCAG 7 cut(s) 117, 150, 201, 1657, 1672, 1936, 2178
BspLI GGNNCC 4 cut(s) 295, 495, 966, 972
BspPI GGATC 6 cut(s) 239, 537, 623, 898, 1703, 2191
BspQI GCTCTTC 1 cut(s) 2199
BspT107I GGYRCC 1 cut(s) 293
BsrBI CCGCTC 1 cut(s) 1009
BsrI ACTGG 6 cut(s) 336, 529, 1317, 1889, 2002, 2272
BssECI CCNNGG 3 cut(s) 974, 1056, 2031
BssSI CACGAG 1 cut(s) 1909
BssT1I CCWWGG 2 cut(s) 974, 2031
Bst2BI CACGAG 1 cut(s) 1909
Bst2UI CCWGG 4 cut(s) 38, 102, 1057, 2201
Bst4CI ACNGT 7 cut(s) 119, 283, 304, 314, 1423, 1816, 1904
BstAPI GCANNNNNTGC 1 cut(s) 1409
BstBAI YACGTR 1 cut(s) 1004
BstC8I GCNNGC 2 cut(s) 20, 323
BstDEI CTNAG 9 cut(s) 125, 158, 209, 876, 1359, 1665, 1680, 1944, 2165
BstF5I GGATG 8 cut(s) 397, 442, 580, 847, 1147, 1675, 1766, 1922
BstH2I RGCGCY 2 cut(s) 11, 25
BstHHI GCGC 3 cut(s) 10, 24, 1467
BstMAI GTCTC 1 cut(s) 701
BstMCI CGRYCG 1 cut(s) 51
BstMWI GCNNNNNNNGC 6 cut(s) 28, 881, 1409, 1464, 1793, 2228
BstNI CCWGG 4 cut(s) 38, 102, 1057, 2201
BstPAI GACNNNNGTC 1 cut(s) 1911
BstSCI CCNGG 4 cut(s) 36, 100, 1055, 2199
BstSFI CTRYAG 2 cut(s) 1038, 1812
BstV1I GCAGC 1 cut(s) 1487
BstV2I GAAGAC 7 cut(s) 151, 282, 522, 585, 782, 1590, 1620
BstX2I RGATCY 2 cut(s) 231, 442
BstXI CCANNNNNNTGG 2 cut(s) 1423, 2279
BstYI RGATCY 2 cut(s) 231, 442
BstZI CGGCCG 1 cut(s) 48
BsuRI GGCC 5 cut(s) 36, 50, 1115, 1458, 2050
BtsCI GGATG 8 cut(s) 397, 442, 580, 847, 1147, 1675, 1766, 1922
BtsIMutI CAGTG 3 cut(s) 343, 1091, 1909
Cac8I GCNNGC 2 cut(s) 20, 323
CfoI GCGC 3 cut(s) 10, 24, 1467
Cfr13I GGNCC 1 cut(s) 1456
Csp6I GTAC 4 cut(s) 1001, 1086, 1427, 1569
CviAII CATG 4 cut(s) 265, 1244, 1409, 1706
CviQI GTAC 4 cut(s) 1001, 1086, 1427, 1569
DdeI CTNAG 9 cut(s) 125, 158, 209, 876, 1359, 1665, 1680, 1944, 2165
EaeI YGGCCR 1 cut(s) 48
EagI CGGCCG 1 cut(s) 48
EciI GGCGGA 1 cut(s) 2246
EclXI CGGCCG 1 cut(s) 48
Eco130I CCWWGG 2 cut(s) 974, 2031
Eco147I AGGCCT 1 cut(s) 36
Eco24I GRGCYC 1 cut(s) 1508
Eco47III AGCGCT 1 cut(s) 23
Eco52I CGGCCG 1 cut(s) 48
Eco57I CTGAAG 4 cut(s) 579, 684, 1698, 1746
EcoRII CCWGG 4 cut(s) 36, 100, 1055, 2199
EcoT14I CCWWGG 2 cut(s) 974, 2031
EcoT38I GRGCYC 1 cut(s) 1508
ErhI CCWWGG 2 cut(s) 974, 2031
FaeI CATG 4 cut(s) 268, 1247, 1412, 1709
FaqI GGGAC 2 cut(s) 151, 1073
FatI CATG 4 cut(s) 264, 1243, 1408, 1705
Fnu4HI GCNGC 3 cut(s) 51, 326, 1476
FokI GGATG 8 cut(s) 404, 449, 587, 854, 1154, 1682, 1753, 1909
FriOI GRGCYC 1 cut(s) 1508
Fsp4HI GCNGC 3 cut(s) 51, 326, 1476
FspBI CTAG 4 cut(s) 11, 32, 446, 1221
GlaI GCGC 3 cut(s) 9, 23, 1466
GluI GCNGC 3 cut(s) 51, 326, 1476
GsaI CCCAGC 3 cut(s) 28, 57, 2283
GsuI CTGGAG 1 cut(s) 1872
HaeII RGCGCY 2 cut(s) 11, 25
HaeIII GGCC 5 cut(s) 36, 50, 1115, 1458, 2050
HapII CCGG 1 cut(s) 968
HhaI GCGC 3 cut(s) 10, 24, 1467
Hin1II CATG 4 cut(s) 268, 1247, 1412, 1709
Hin6I GCGC 3 cut(s) 8, 22, 1465
HinP1I GCGC 3 cut(s) 8, 22, 1465
HincII GTYRAC 2 cut(s) 1872, 2101
HindII GTYRAC 2 cut(s) 1872, 2101
HinfI GANTC 9 cut(s) 139, 979, 1525, 1547, 1589, 1721, 1781, 1912, 2086
HpaII CCGG 1 cut(s) 968
HphI GGTGA 3 cut(s) 281, 617, 2113
Hpy166II GTNNAC 4 cut(s) 905, 1571, 1872, 2101
Hpy188I TCNGA 8 cut(s) 159, 210, 664, 1594, 1666, 1690, 1717, 1726
Hpy188III TCNNGA 6 cut(s) 446, 533, 1207, 1518, 1655, 1770
Hpy8I GTNNAC 4 cut(s) 905, 1571, 1872, 2101
HpyCH4III ACNGT 7 cut(s) 119, 283, 304, 314, 1423, 1816, 1904
HpyCH4IV ACGT 2 cut(s) 1003, 1753
HpyCH4V TGCA 5 cut(s) 221, 596, 1403, 2075, 2255
HpyF10VI GCNNNNNNNGC 6 cut(s) 28, 881, 1409, 1464, 1793, 2228
HpyF3I CTNAG 9 cut(s) 125, 158, 209, 876, 1359, 1665, 1680, 1944, 2165
HpySE526I ACGT 2 cut(s) 1003, 1753
Hsp92II CATG 4 cut(s) 268, 1247, 1412, 1709
HspAI GCGC 3 cut(s) 8, 22, 1465
LguI GCTCTTC 1 cut(s) 2199
LmnI GCTCC 4 cut(s) 28, 170, 964, 970
Lsp1109I GCAGC 1 cut(s) 1487
LweI GCATC 5 cut(s) 1043, 1665, 2062, 2146, 2242
MaeI CTAG 4 cut(s) 11, 32, 446, 1221
MaeII ACGT 2 cut(s) 1003, 1753
MaeIII GTNAC 4 cut(s) 107, 1211, 1308, 1904
MbiI CCGCTC 1 cut(s) 1009
MflI RGATCY 2 cut(s) 231, 442
MhlI GDGCHC 1 cut(s) 1508
MlyI GAGTC 5 cut(s) 133, 973, 1534, 1598, 1921
MmeI TCCRAC 3 cut(s) 544, 1572, 1994
MseI TTAA 5 cut(s) 245, 249, 956, 1119, 2091
MslI CAYNNNNRTG 2 cut(s) 1248, 1421
MspA1I CMGCKG 1 cut(s) 53
MspI CCGG 1 cut(s) 968
MspR9I CCNGG 4 cut(s) 38, 102, 1057, 2201
Mva1269I GAATGC 1 cut(s) 1684
MvaI CCWGG 4 cut(s) 38, 102, 1057, 2201
MwoI GCNNNNNNNGC 6 cut(s) 28, 881, 1409, 1464, 1793, 2228
NlaIII CATG 4 cut(s) 268, 1247, 1412, 1709
NlaIV GGNNCC 4 cut(s) 295, 495, 966, 972
NmeAIII GCCGAG 1 cut(s) 2125
NmuCI GTSAC 1 cut(s) 1904
OliI CACNNNNGTG 1 cut(s) 1421
PacI TTAATTAA 1 cut(s) 249
PceI AGGCCT 1 cut(s) 36
PciSI GCTCTTC 1 cut(s) 2199
PcsI WCGNNNNNNNCGW 1 cut(s) 1000
PctI GAATGC 1 cut(s) 1684
PfeI GAWTC 4 cut(s) 1547, 1721, 1781, 2086
PfoI TCCNGGA 1 cut(s) 2199
PkrI GCNGC 3 cut(s) 52, 327, 1477
PleI GAGTC 5 cut(s) 133, 973, 1533, 1597, 1920
PpsI GAGTC 5 cut(s) 133, 973, 1533, 1597, 1920
Ppu21I YACGTR 1 cut(s) 1004
PshAI GACNNNNGTC 1 cut(s) 1911
PshBI ATTAAT 1 cut(s) 245
Psp6I CCWGG 4 cut(s) 36, 100, 1055, 2199
PspFI CCCAGC 3 cut(s) 24, 53, 2279
PspGI CCWGG 4 cut(s) 36, 100, 1055, 2199
PspN4I GGNNCC 4 cut(s) 295, 495, 966, 972
PspPI GGNCC 1 cut(s) 1456
PsuI RGATCY 2 cut(s) 231, 442
RsaI GTAC 4 cut(s) 1002, 1087, 1428, 1570
RsaNI GTAC 4 cut(s) 1001, 1086, 1427, 1569
RseI CAYNNNNRTG 2 cut(s) 1248, 1421
SapI GCTCTTC 1 cut(s) 2199
SaqAI TTAA 5 cut(s) 245, 249, 956, 1119, 2091
SatI GCNGC 3 cut(s) 51, 326, 1476
Sau96I GGNCC 1 cut(s) 1456
SchI GAGTC 5 cut(s) 133, 973, 1534, 1598, 1921
ScrFI CCNGG 4 cut(s) 38, 102, 1057, 2201
SduI GDGCHC 1 cut(s) 1508
SfaNI GCATC 5 cut(s) 1043, 1665, 2062, 2146, 2242
SfcI CTRYAG 2 cut(s) 1038, 1812
SmiMI CAYNNNNRTG 2 cut(s) 1248, 1421
SmlI CTYRAG 2 cut(s) 1653, 1927
SmoI CTYRAG 2 cut(s) 1653, 1927
SseBI AGGCCT 1 cut(s) 36
SsiI CCGC 7 cut(s) 51, 326, 719, 1009, 1344, 1513, 2231
SspMI CTAG 4 cut(s) 11, 32, 446, 1221
StuI AGGCCT 1 cut(s) 36
StyD4I CCNGG 4 cut(s) 36, 100, 1055, 2199
StyI CCWWGG 2 cut(s) 974, 2031
TaaI ACNGT 7 cut(s) 119, 283, 304, 314, 1423, 1816, 1904
TaiI ACGT 2 cut(s) 1006, 1756
TaqI TCGA 3 cut(s) 142, 893, 1448
TatI WGTACW 1 cut(s) 1568
TauI GCSGC 2 cut(s) 53, 328
TfiI GAWTC 4 cut(s) 1547, 1721, 1781, 2086
Tru1I TTAA 5 cut(s) 245, 249, 956, 1119, 2091
Tru9I TTAA 5 cut(s) 245, 249, 956, 1119, 2091
TscAI CASTG 3 cut(s) 343, 1098, 1909
TseFI GTSAC 1 cut(s) 1904
TseI GCWGC 1 cut(s) 1475
Tsp45I GTSAC 1 cut(s) 1904
TspRI CASTG 3 cut(s) 343, 1098, 1909
VspI ATTAAT 1 cut(s) 245
XapI RAATTY 1 cut(s) 1316
XbaI TCTAGA 1 cut(s) 445
XspI CTAG 4 cut(s) 11, 32, 446, 1221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.