Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0333961 |
| rosa_laevigata | RLG00000014578 RLG00000032726 |
| rosa_multiflora | Rmu_sc0001485.1_g000001 Rmu_sc0002561.1_g000001 Rmu_sc0003629.1_g000068 Rmu_sc0006452.1_g000011 Rmu_sc0010342.1_g000010 Rmu_sc0019424.1_g000001 Rmu_ssc0000361.1_g000015 |
| rosa_roxburghii | Rroxscaffold_1G00046480 |
| rosa_rugosa | Rorug03G0154200 |
| rosa_samantha | Rh2AG347500 Rh4BG367500 Rh4DG383900 Rh5CG263600 Rh5DG139100 Rh6AG196400 Rh6CG201600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 156, 159, 162, 213 |
| AcsI | RAATTY | 1 cut(s) | 57 |
| AcyI | GRCGYC | 1 cut(s) | 105 |
| AdeI | CACNNNGTG | 1 cut(s) | 16 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 219 |
| AflII | CTTAAG | 1 cut(s) | 217 |
| AgsI | TTSAA | 2 cut(s) | 62, 230 |
| AluBI | AGCT | 2 cut(s) | 29, 118 |
| AluI | AGCT | 2 cut(s) | 29, 118 |
| Alw26I | GTCTC | 2 cut(s) | 112, 153 |
| ApeKI | GCWGC | 2 cut(s) | 5, 191 |
| ApoI | RAATTY | 1 cut(s) | 57 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 230 |
| AsuHPI | GGTGA | 2 cut(s) | 85, 240 |
| BaeGI | GKGCMC | 1 cut(s) | 226 |
| BbvI | GCAGC | 2 cut(s) | 17, 178 |
| BccI | CCATC | 1 cut(s) | 131 |
| BceAI | ACGGC | 1 cut(s) | 118 |
| BcoDI | GTCTC | 2 cut(s) | 112, 153 |
| BfrI | CTTAAG | 1 cut(s) | 217 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 221 |
| BisI | GCNGC | 6 cut(s) | 6, 156, 159, 162, 192, 213 |
| BlsI | GCNGC | 6 cut(s) | 7, 157, 160, 163, 193, 214 |
| BmsI | GCATC | 1 cut(s) | 9 |
| BpuEI | CTTGAG | 1 cut(s) | 98 |
| BsaHI | GRCGYC | 1 cut(s) | 105 |
| BsaJI | CCNNGG | 1 cut(s) | 100 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 219 |
| BseDI | CCNNGG | 1 cut(s) | 100 |
| BseGI | GGATG | 1 cut(s) | 35 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 219 |
| BseMII | CTCAG | 1 cut(s) | 39 |
| BseSI | GKGCMC | 1 cut(s) | 226 |
| BseXI | GCAGC | 2 cut(s) | 17, 178 |
| Bsh1285I | CGRYCG | 1 cut(s) | 186 |
| BsiEI | CGRYCG | 1 cut(s) | 186 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 219 |
| BsmAI | GTCTC | 2 cut(s) | 112, 153 |
| BsmBI | CGTCTC | 1 cut(s) | 112 |
| Bsp1286I | GDGCHC | 1 cut(s) | 226 |
| BspACI | CCGC | 4 cut(s) | 156, 159, 162, 213 |
| BspCNI | CTCAG | 1 cut(s) | 38 |
| BspTI | CTTAAG | 1 cut(s) | 217 |
| BssECI | CCNNGG | 1 cut(s) | 100 |
| BssNI | GRCGYC | 1 cut(s) | 105 |
| Bst4CI | ACNGT | 2 cut(s) | 184, 234 |
| Bst6I | CTCTTC | 1 cut(s) | 53 |
| BstACI | GRCGYC | 1 cut(s) | 105 |
| BstAFI | CTTAAG | 1 cut(s) | 217 |
| BstDEI | CTNAG | 1 cut(s) | 25 |
| BstDSI | CCRYGG | 1 cut(s) | 100 |
| BstF5I | GGATG | 1 cut(s) | 35 |
| BstMAI | GTCTC | 2 cut(s) | 112, 153 |
| BstMCI | CGRYCG | 1 cut(s) | 186 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 161, 221 |
| BstSLI | GKGCMC | 1 cut(s) | 226 |
| BstV1I | GCAGC | 2 cut(s) | 17, 178 |
| BtgI | CCRYGG | 1 cut(s) | 100 |
| BtsCI | GGATG | 1 cut(s) | 35 |
| CseI | GACGC | 1 cut(s) | 94 |
| CviAII | CATG | 2 cut(s) | 145, 172 |
| CviJI | RGCY | 3 cut(s) | 8, 29, 118 |
| CviKI_1 | RGCY | 3 cut(s) | 8, 29, 118 |
| DdeI | CTNAG | 1 cut(s) | 25 |
| DraIII | CACNNNGTG | 1 cut(s) | 16 |
| Eam1104I | CTCTTC | 1 cut(s) | 53 |
| EarI | CTCTTC | 1 cut(s) | 53 |
| Esp3I | CGTCTC | 1 cut(s) | 112 |
| FaeI | CATG | 2 cut(s) | 148, 175 |
| FaiI | YATR | 2 cut(s) | 146, 173 |
| FatI | CATG | 2 cut(s) | 144, 171 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 156, 159, 162, 192, 213 |
| FokI | GGATG | 1 cut(s) | 22 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 156, 159, 162, 192, 213 |
| GluI | GCNGC | 6 cut(s) | 6, 156, 159, 162, 192, 213 |
| HgaI | GACGC | 1 cut(s) | 94 |
| Hin1I | GRCGYC | 1 cut(s) | 105 |
| Hin1II | CATG | 2 cut(s) | 148, 175 |
| HphI | GGTGA | 2 cut(s) | 85, 240 |
| Hpy99I | CGWCG | 2 cut(s) | 191, 238 |
| HpyAV | CCTTC | 3 cut(s) | 106, 196, 232 |
| HpyCH4III | ACNGT | 2 cut(s) | 184, 234 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 161, 221 |
| HpyF3I | CTNAG | 1 cut(s) | 25 |
| Hsp92I | GRCGYC | 1 cut(s) | 105 |
| Hsp92II | CATG | 2 cut(s) | 148, 175 |
| LmnI | GCTCC | 1 cut(s) | 123 |
| Lsp1109I | GCAGC | 2 cut(s) | 17, 178 |
| LweI | GCATC | 1 cut(s) | 9 |
| MaeIII | GTNAC | 1 cut(s) | 246 |
| MboII | GAAGA | 1 cut(s) | 40 |
| MhlI | GDGCHC | 1 cut(s) | 226 |
| MluCI | AATT | 1 cut(s) | 57 |
| MnlI | CCTC | 3 cut(s) | 86, 175, 188 |
| MseI | TTAA | 1 cut(s) | 218 |
| MspCI | CTTAAG | 1 cut(s) | 217 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 161, 221 |
| NlaIII | CATG | 2 cut(s) | 148, 175 |
| NmuCI | GTSAC | 1 cut(s) | 246 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 242 |
| PkrI | GCNGC | 6 cut(s) | 7, 157, 160, 163, 193, 214 |
| SaqAI | TTAA | 1 cut(s) | 218 |
| SatI | GCNGC | 6 cut(s) | 6, 156, 159, 162, 192, 213 |
| SduI | GDGCHC | 1 cut(s) | 226 |
| SetI | ASST | 6 cut(s) | 31, 98, 120, 207, 243, 253 |
| SfaNI | GCATC | 1 cut(s) | 9 |
| SgeI | CNNG | 7 cut(s) | 113, 127, 157, 164, 184, 193, 211 |
| SmlI | CTYRAG | 2 cut(s) | 113, 217 |
| SmoI | CTYRAG | 2 cut(s) | 113, 217 |
| Sse9I | AATT | 1 cut(s) | 57 |
| SsiI | CCGC | 4 cut(s) | 156, 159, 162, 213 |
| TaaI | ACNGT | 2 cut(s) | 184, 234 |
| TaqI | TCGA | 1 cut(s) | 236 |
| TasI | AATT | 1 cut(s) | 57 |
| TauI | GCSGC | 4 cut(s) | 158, 161, 164, 215 |
| Tru1I | TTAA | 1 cut(s) | 218 |
| Tru9I | TTAA | 1 cut(s) | 218 |
| TseFI | GTSAC | 1 cut(s) | 246 |
| TseI | GCWGC | 2 cut(s) | 5, 191 |
| Tsp45I | GTSAC | 1 cut(s) | 246 |
| Vha464I | CTTAAG | 1 cut(s) | 217 |
| XapI | RAATTY | 1 cut(s) | 57 |